ARIC

Bam files are from matched normal + "very early" plasma (diagnostic) samples, sequenced on Illumina NovaSeq 6000 instrument. After bwa alignment, duplicates were removed by picard markduplicate, and base quality scores recalibrated using gatk baserecalibrator + apply bqsr.

19/05/2025
14 samples
DAC: EGAC00001000507
Technology: Illumina NovaSeq 6000

Access Policy1 Study Files

Metadata

Request Access

General data access policy by the Ludwig Center at Johns Hopkins

This document refers to the dataset which has been submitted to the European Genome Archive (EGA) for the restricted access by legitimate academic institutions that have agreed to comply with the terms of a Data Access Agreement drafted by the Data Access Committee. There are a number of steps that a researcher must take to obtain access to these data and the process is overseen by the Ludwig JHMI Committee headed by Dr. Ken Kinzler(kinzlke@jhmi.edu).

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS00001008068	Detection of cancers three years prior to diagnosis using plasma cell-free DNA	Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size
EGAF00008740127	bam	71.5 GB
EGAF00008740128	bam	304.8 GB
EGAF00008740129	bam	68.7 GB
EGAF00008740130	bam	93.9 GB
EGAF00008740131	bam	78.5 GB
EGAF00008740132	bam	329.8 GB
EGAF00008740133	bam	75.2 GB
EGAF00008740134	bam	332.6 GB
EGAF00008740135	bam	78.2 GB
EGAF00008740136	bam	329.4 GB
EGAF00008740137	bam	69.4 GB
EGAF00008740138	bam	330.9 GB
EGAF00008740139	bam	60.3 GB
EGAF00008740140	bam	307.9 GB
14 Files (2.5 TB)