Single-cell Transcriptomic and Immune Receptor Profiling of PBMCs from Dengue-Infected Individuals with Varying Disease Severities
This dataset comprises single-cell RNA sequencing (scRNA-seq) and immune receptor (TCR/BCR) profiling of peripheral blood mononuclear cells (PBMCs) collected from individuals infected with dengue virus (DENV) exhibiting different clinical severities: asymptomatic dengue (AD), dengue fever (DF), and dengue hemorrhagic fever (DHF). PBMCs were collected during the acute phase and, in some cases, during convalescence. The data provide a resource for understanding protective versus pathogenic immune responses in dengue infection.
- 30/06/2025
- 1 sample
- DAC: EGAC00001000205
- Technology: Illumina NovaSeq 6000
Wellcome Trust Sanger Institute Data Sharing Policy
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001004980 | Transcriptome Analysis |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
|
|---|---|---|---|---|
| EGAF00008770828 | cram | 4.0 GB |
|
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| EGAF00008770829 | cram | 4.6 GB |
|
|
| EGAF00008770830 | cram | 308.7 MB |
|
|
| EGAF00008770831 | cram | 325.6 MB |
|
|
| EGAF00008770832 | cram | 372.2 MB |
|
|
| EGAF00008770833 | cram | 279.4 MB |
|
|
| EGAF00008770834 | cram | 350.8 MB |
|
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| EGAF00008770835 | cram | 239.7 MB |
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|
| EGAF00008770836 | cram | 450.6 MB |
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| EGAF00008770837 | cram | 349.5 MB |
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| EGAF00008770838 | cram | 101.2 MB |
|
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| EGAF00008770839 | cram | 350.4 MB |
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| EGAF00008770840 | cram | 4.9 GB |
|
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| EGAF00008770841 | cram | 373.3 MB |
|
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| EGAF00008770842 | cram | 325.4 MB |
|
|
| EGAF00008770843 | cram | 298.1 MB |
|
|
| EGAF00008770844 | cram | 401.2 MB |
|
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| EGAF00008770845 | cram | 366.7 MB |
|
|
| EGAF00008770846 | cram | 256.4 MB |
|
|
| EGAF00008770847 | cram | 307.6 MB |
|
|
| EGAF00008770848 | cram | 321.3 MB |
|
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| EGAF00008770849 | cram | 207.3 MB |
|
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| EGAF00008770850 | cram | 429.7 MB |
|
|
| EGAF00008770851 | cram | 4.4 GB |
|
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| EGAF00008770852 | cram | 239.0 MB |
|
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| EGAF00008770853 | cram | 5.6 GB |
|
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| EGAF00008770854 | cram | 4.4 GB |
|
|
| EGAF00008770855 | cram | 5.0 GB |
|
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| EGAF00008770856 | cram | 5.5 GB |
|
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| EGAF00008770857 | cram | 5.2 GB |
|
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| EGAF00008770858 | cram | 3.9 GB |
|
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| EGAF00008770859 | cram | 5.6 GB |
|
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| EGAF00008770860 | cram | 4.3 GB |
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| EGAF00008770861 | cram | 6.3 GB |
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| EGAF00008770862 | cram | 4.6 GB |
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| EGAF00008770863 | cram | 142.4 MB |
|
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| EGAF00008770864 | cram | 7.9 GB |
|
|
| EGAF00008770865 | cram | 9.0 GB |
|
|
| EGAF00008770866 | cram | 4.8 GB |
|
|
| EGAF00008770867 | cram | 7.1 GB |
|
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| EGAF00008770868 | cram | 8.2 GB |
|
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| EGAF00008770869 | cram | 1.8 GB |
|
|
| EGAF00008770870 | cram | 341.2 MB |
|
|
| EGAF00008770871 | cram | 379.3 MB |
|
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| EGAF00008770872 | cram | 312.3 MB |
|
|
| EGAF00008770873 | cram | 4.2 GB |
|
|
| EGAF00008770874 | cram | 387.7 MB |
|
|
| EGAF00008770875 | cram | 301.8 MB |
|
|
| EGAF00008770876 | cram | 464.3 MB |
|
|
| EGAF00008770877 | cram | 289.7 MB |
|
|
| EGAF00008770878 | cram | 311.6 MB |
|
|
| EGAF00008770879 | cram | 290.3 MB |
|
|
| EGAF00008770880 | cram | 326.0 MB |
|
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| EGAF00008770881 | cram | 388.1 MB |
|
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| EGAF00008770882 | cram | 334.5 MB |
|
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| EGAF00008770883 | cram | 404.0 MB |
|
|
| EGAF00008770884 | cram | 3.4 GB |
|
|
| EGAF00008770885 | cram | 242.6 MB |
|
|
| EGAF00008770886 | cram | 261.8 MB |
|
|
| EGAF00008770887 | cram | 346.5 MB |
|
|
| EGAF00008770888 | cram | 322.7 MB |
|
|
| EGAF00008770889 | cram | 274.5 MB |
|
|
| EGAF00008770890 | cram | 285.7 MB |
|
|
| EGAF00008770891 | cram | 295.9 MB |
|
|
| EGAF00008770892 | cram | 327.9 MB |
|
|
| EGAF00008770893 | cram | 256.3 MB |
|
|
| EGAF00008770894 | cram | 258.7 MB |
|
|
| EGAF00008770895 | cram | 4.1 GB |
|
|
| EGAF00008770896 | cram | 267.8 MB |
|
|
| EGAF00008770897 | cram | 303.1 MB |
|
|
| EGAF00008770898 | cram | 302.4 MB |
|
|
| EGAF00008770899 | cram | 300.7 MB |
|
|
| EGAF00008770900 | cram | 192.5 MB |
|
|
| EGAF00008770901 | cram | 203.1 MB |
|
|
| EGAF00008770902 | cram | 234.9 MB |
|
|
| EGAF00008770903 | cram | 271.7 MB |
|
|
| EGAF00008770904 | cram | 342.6 MB |
|
|
| EGAF00008770905 | cram | 4.9 GB |
|
|
| EGAF00008770906 | cram | 4.0 GB |
|
|
| EGAF00008770907 | cram | 5.7 GB |
|
|
| EGAF00008770908 | cram | 3.6 GB |
|
|
| EGAF00008770909 | cram | 4.9 GB |
|
|
| EGAF00008770910 | cram | 5.0 GB |
|
|
| EGAF00008770911 | cram | 3.8 GB |
|
|
| EGAF00008770912 | cram | 4.7 GB |
|
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| EGAF00008770913 | cram | 5.1 GB |
|
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| EGAF00008770914 | cram | 4.3 GB |
|
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| EGAF00008770915 | cram | 3.9 GB |
|
|
| EGAF00008770916 | cram | 6.1 GB |
|
|
| EGAF00008770917 | cram | 5.5 GB |
|
|
| EGAF00008770918 | cram | 3.9 GB |
|
|
| EGAF00008770919 | cram | 6.6 GB |
|
|
| EGAF00008770920 | cram | 3.4 GB |
|
|
| EGAF00008770921 | cram | 7.1 GB |
|
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| EGAF00008770922 | cram | 4.0 GB |
|
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| EGAF00008770923 | cram | 4.5 GB |
|
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| EGAF00008770924 | cram | 1.5 GB |
|
|
| EGAF00008770925 | cram | 5.1 GB |
|
|
| EGAF00008770926 | cram | 4.8 GB |
|
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| EGAF00008770927 | cram | 4.4 GB |
|
|
| EGAF00008770928 | cram | 4.8 GB |
|
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| EGAF00008770929 | cram | 5.6 GB |
|
|
| EGAF00008770930 | cram | 3.6 GB |
|
|
| EGAF00008770931 | cram | 3.7 GB |
|
|
| EGAF00008770932 | cram | 334.0 MB |
|
|
| EGAF00008770933 | cram | 316.7 MB |
|
|
| EGAF00008770934 | cram | 328.7 MB |
|
|
| EGAF00008770935 | cram | 299.6 MB |
|
|
| EGAF00008770936 | cram | 299.3 MB |
|
|
| EGAF00008770937 | cram | 349.9 MB |
|
|
| EGAF00008770938 | cram | 337.3 MB |
|
|
| EGAF00008770939 | cram | 364.5 MB |
|
|
| EGAF00008770940 | cram | 280.9 MB |
|
|
| EGAF00008770941 | cram | 3.7 GB |
|
|
| EGAF00008770942 | cram | 303.5 MB |
|
|
| EGAF00008770943 | cram | 384.7 MB |
|
|
| EGAF00008770944 | cram | 439.8 MB |
|
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| EGAF00008770945 | cram | 257.5 MB |
|
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| EGAF00008770946 | cram | 441.9 MB |
|
|
| EGAF00008770947 | cram | 400.4 MB |
|
|
| EGAF00008770948 | cram | 273.8 MB |
|
|
| EGAF00008770949 | cram | 298.1 MB |
|
|
| EGAF00008770950 | cram | 320.3 MB |
|
|
| EGAF00008770951 | cram | 457.3 MB |
|
|
| EGAF00008770952 | cram | 4.6 GB |
|
|
| EGAF00008770953 | cram | 351.5 MB |
|
|
| EGAF00008770954 | cram | 351.8 MB |
|
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| EGAF00008770955 | cram | 401.9 MB |
|
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| EGAF00008770956 | cram | 488.9 MB |
|
|
| EGAF00008770957 | cram | 305.3 MB |
|
|
| EGAF00008770958 | cram | 311.6 MB |
|
|
| EGAF00008770959 | cram | 271.3 MB |
|
|
| EGAF00008770960 | cram | 357.9 MB |
|
|
| EGAF00008770961 | cram | 321.0 MB |
|
|
| EGAF00008770962 | cram | 148.4 MB |
|
|
| EGAF00008770963 | cram | 5.2 GB |
|
|
| EGAF00008770964 | cram | 348.2 MB |
|
|
| EGAF00008770965 | cram | 310.2 MB |
|
|
| EGAF00008770966 | cram | 425.7 MB |
|
|
| EGAF00008770967 | cram | 327.4 MB |
|
|
| EGAF00008770968 | cram | 359.5 MB |
|
|
| EGAF00008770969 | cram | 314.8 MB |
|
|
| EGAF00008770970 | cram | 231.6 MB |
|
|
| EGAF00008770971 | cram | 264.1 MB |
|
|
| EGAF00008770972 | cram | 278.4 MB |
|
|
| EGAF00008770973 | cram | 478.0 MB |
|
|
| EGAF00008770974 | cram | 4.9 GB |
|
|
| EGAF00008770975 | cram | 396.1 MB |
|
|
| EGAF00008770976 | cram | 227.3 MB |
|
|
| EGAF00008770977 | cram | 282.5 MB |
|
|
| EGAF00008770978 | cram | 339.2 MB |
|
|
| EGAF00008770979 | cram | 283.4 MB |
|
|
| EGAF00008770980 | cram | 236.2 MB |
|
|
| EGAF00008770981 | cram | 355.8 MB |
|
|
| EGAF00008770982 | cram | 272.3 MB |
|
|
| EGAF00008770983 | cram | 325.5 MB |
|
|
| EGAF00008770984 | cram | 289.9 MB |
|
|
| EGAF00008770985 | cram | 4.4 GB |
|
|
| EGAF00008770986 | cram | 390.5 MB |
|
|
| EGAF00008770987 | cram | 258.2 MB |
|
|
| EGAF00008770988 | cram | 231.9 MB |
|
|
| EGAF00008770989 | cram | 277.0 MB |
|
|
| EGAF00008770990 | cram | 449.1 MB |
|
|
| EGAF00008770991 | cram | 178.4 MB |
|
|
| EGAF00008770992 | cram | 213.4 MB |
|
|
| EGAF00008770993 | cram | 230.0 MB |
|
|
| EGAF00008770994 | cram | 392.6 MB |
|
|
| EGAF00008770995 | cram | 256.4 MB |
|
|
| EGAF00008770996 | cram | 4.0 GB |
|
|
| EGAF00008770997 | cram | 4.6 GB |
|
|
| EGAF00008770998 | cram | 310.2 MB |
|
|
| EGAF00008770999 | cram | 327.3 MB |
|
|
| EGAF00008771000 | cram | 373.5 MB |
|
|
| EGAF00008771001 | cram | 281.2 MB |
|
|
| EGAF00008771002 | cram | 353.2 MB |
|
|
| EGAF00008771003 | cram | 241.3 MB |
|
|
| EGAF00008771004 | cram | 453.0 MB |
|
|
| EGAF00008771005 | cram | 351.9 MB |
|
|
| EGAF00008771006 | cram | 101.7 MB |
|
|
| EGAF00008771007 | cram | 352.0 MB |
|
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| EGAF00008771008 | cram | 4.9 GB |
|
|
| EGAF00008771009 | cram | 375.8 MB |
|
|
| EGAF00008771010 | cram | 327.1 MB |
|
|
| EGAF00008771011 | cram | 299.2 MB |
|
|
| EGAF00008771012 | cram | 404.7 MB |
|
|
| EGAF00008771013 | cram | 368.6 MB |
|
|
| EGAF00008771014 | cram | 258.2 MB |
|
|
| EGAF00008771015 | cram | 309.2 MB |
|
|
| EGAF00008771016 | cram | 322.8 MB |
|
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| EGAF00008771017 | cram | 209.0 MB |
|
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| EGAF00008771018 | cram | 432.0 MB |
|
|
| EGAF00008771019 | cram | 4.5 GB |
|
|
| EGAF00008771020 | cram | 240.4 MB |
|
|
| EGAF00008771021 | cram | 5.6 GB |
|
|
| EGAF00008771022 | cram | 4.4 GB |
|
|
| EGAF00008771023 | cram | 5.0 GB |
|
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| EGAF00008771024 | cram | 5.5 GB |
|
|
| EGAF00008771025 | cram | 5.2 GB |
|
|
| EGAF00008771026 | cram | 3.9 GB |
|
|
| EGAF00008771027 | cram | 5.6 GB |
|
|
| EGAF00008771028 | cram | 4.4 GB |
|
|
| EGAF00008771029 | cram | 6.3 GB |
|
|
| EGAF00008771030 | cram | 4.7 GB |
|
|
| EGAF00008771031 | cram | 143.0 MB |
|
|
| EGAF00008771032 | cram | 7.9 GB |
|
|
| EGAF00008771033 | cram | 9.1 GB |
|
|
| EGAF00008771034 | cram | 4.9 GB |
|
|
| EGAF00008771035 | cram | 7.2 GB |
|
|
| EGAF00008771036 | cram | 8.3 GB |
|
|
| EGAF00008771037 | cram | 1.8 GB |
|
|
| EGAF00008771038 | cram | 342.7 MB |
|
|
| EGAF00008771039 | cram | 381.5 MB |
|
|
| EGAF00008771040 | cram | 313.5 MB |
|
|
| EGAF00008771041 | cram | 4.3 GB |
|
|
| EGAF00008771042 | cram | 389.4 MB |
|
|
| EGAF00008771043 | cram | 302.6 MB |
|
|
| EGAF00008771044 | cram | 467.2 MB |
|
|
| EGAF00008771045 | cram | 291.1 MB |
|
|
| EGAF00008771046 | cram | 312.5 MB |
|
|
| EGAF00008771047 | cram | 291.6 MB |
|
|
| EGAF00008771048 | cram | 328.5 MB |
|
|
| EGAF00008771049 | cram | 389.8 MB |
|
|
| EGAF00008771050 | cram | 336.6 MB |
|
|
| EGAF00008771051 | cram | 405.5 MB |
|
|
| EGAF00008771052 | cram | 3.4 GB |
|
|
| EGAF00008771053 | cram | 243.3 MB |
|
|
| EGAF00008771054 | cram | 262.7 MB |
|
|
| EGAF00008771055 | cram | 347.5 MB |
|
|
| EGAF00008771056 | cram | 324.6 MB |
|
|
| EGAF00008771057 | cram | 275.7 MB |
|
|
| EGAF00008771058 | cram | 287.0 MB |
|
|
| EGAF00008771059 | cram | 297.1 MB |
|
|
| EGAF00008771060 | cram | 329.8 MB |
|
|
| EGAF00008771061 | cram | 258.4 MB |
|
|
| EGAF00008771062 | cram | 260.3 MB |
|
|
| EGAF00008771063 | cram | 4.1 GB |
|
|
| EGAF00008771064 | cram | 269.4 MB |
|
|
| EGAF00008771065 | cram | 305.2 MB |
|
|
| EGAF00008771066 | cram | 304.6 MB |
|
|
| EGAF00008771067 | cram | 303.0 MB |
|
|
| EGAF00008771068 | cram | 193.2 MB |
|
|
| EGAF00008771069 | cram | 204.5 MB |
|
|
| EGAF00008771070 | cram | 236.6 MB |
|
|
| EGAF00008771071 | cram | 273.1 MB |
|
|
| EGAF00008771072 | cram | 345.4 MB |
|
|
| EGAF00008771073 | cram | 4.9 GB |
|
|
| EGAF00008771074 | cram | 4.1 GB |
|
|
| EGAF00008771075 | cram | 5.7 GB |
|
|
| EGAF00008771076 | cram | 3.6 GB |
|
|
| EGAF00008771077 | cram | 4.9 GB |
|
|
| EGAF00008771078 | cram | 5.0 GB |
|
|
| EGAF00008771079 | cram | 3.8 GB |
|
|
| EGAF00008771080 | cram | 4.7 GB |
|
|
| EGAF00008771081 | cram | 5.2 GB |
|
|
| EGAF00008771082 | cram | 4.3 GB |
|
|
| EGAF00008771083 | cram | 4.0 GB |
|
|
| EGAF00008771084 | cram | 6.1 GB |
|
|
| EGAF00008771085 | cram | 5.5 GB |
|
|
| EGAF00008771086 | cram | 4.0 GB |
|
|
| EGAF00008771087 | cram | 6.6 GB |
|
|
| EGAF00008771088 | cram | 3.4 GB |
|
|
| EGAF00008771089 | cram | 7.2 GB |
|
|
| EGAF00008771090 | cram | 4.0 GB |
|
|
| EGAF00008771091 | cram | 4.5 GB |
|
|
| EGAF00008771092 | cram | 1.5 GB |
|
|
| EGAF00008771093 | cram | 5.2 GB |
|
|
| EGAF00008771094 | cram | 4.9 GB |
|
|
| EGAF00008771095 | cram | 4.5 GB |
|
|
| EGAF00008771096 | cram | 4.9 GB |
|
|
| EGAF00008771097 | cram | 5.6 GB |
|
|
| EGAF00008771098 | cram | 3.6 GB |
|
|
| EGAF00008771099 | cram | 3.7 GB |
|
|
| EGAF00008771100 | cram | 335.1 MB |
|
|
| EGAF00008771101 | cram | 319.1 MB |
|
|
| EGAF00008771102 | cram | 329.8 MB |
|
|
| EGAF00008771103 | cram | 301.4 MB |
|
|
| EGAF00008771104 | cram | 300.9 MB |
|
|
| EGAF00008771105 | cram | 351.5 MB |
|
|
| EGAF00008771106 | cram | 338.5 MB |
|
|
| EGAF00008771107 | cram | 366.8 MB |
|
|
| EGAF00008771108 | cram | 282.1 MB |
|
|
| EGAF00008771109 | cram | 3.7 GB |
|
|
| EGAF00008771110 | cram | 304.8 MB |
|
|
| EGAF00008771111 | cram | 386.3 MB |
|
|
| EGAF00008771112 | cram | 442.5 MB |
|
|
| EGAF00008771113 | cram | 258.6 MB |
|
|
| EGAF00008771114 | cram | 443.0 MB |
|
|
| EGAF00008771115 | cram | 402.4 MB |
|
|
| EGAF00008771116 | cram | 274.8 MB |
|
|
| EGAF00008771117 | cram | 299.5 MB |
|
|
| EGAF00008771118 | cram | 321.1 MB |
|
|
| EGAF00008771119 | cram | 460.1 MB |
|
|
| EGAF00008771120 | cram | 4.6 GB |
|
|
| EGAF00008771121 | cram | 352.9 MB |
|
|
| EGAF00008771122 | cram | 352.7 MB |
|
|
| EGAF00008771123 | cram | 403.3 MB |
|
|
| EGAF00008771124 | cram | 491.8 MB |
|
|
| EGAF00008771125 | cram | 306.7 MB |
|
|
| EGAF00008771126 | cram | 313.1 MB |
|
|
| EGAF00008771127 | cram | 273.0 MB |
|
|
| EGAF00008771128 | cram | 360.3 MB |
|
|
| EGAF00008771129 | cram | 322.3 MB |
|
|
| EGAF00008771130 | cram | 149.0 MB |
|
|
| EGAF00008771131 | cram | 5.2 GB |
|
|
| EGAF00008771132 | cram | 349.8 MB |
|
|
| EGAF00008771133 | cram | 311.4 MB |
|
|
| EGAF00008771134 | cram | 428.5 MB |
|
|
| EGAF00008771135 | cram | 329.3 MB |
|
|
| EGAF00008771136 | cram | 360.8 MB |
|
|
| EGAF00008771137 | cram | 315.9 MB |
|
|
| EGAF00008771138 | cram | 232.4 MB |
|
|
| EGAF00008771139 | cram | 265.6 MB |
|
|
| EGAF00008771140 | cram | 279.6 MB |
|
|
| EGAF00008771141 | cram | 480.0 MB |
|
|
| EGAF00008771142 | cram | 4.9 GB |
|
|
| EGAF00008771143 | cram | 397.6 MB |
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| EGAF00008771144 | cram | 228.5 MB |
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|
| EGAF00008771145 | cram | 284.6 MB |
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|
| EGAF00008771146 | cram | 341.2 MB |
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|
| EGAF00008771147 | cram | 285.9 MB |
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|
| EGAF00008771148 | cram | 237.6 MB |
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| EGAF00008771149 | cram | 358.4 MB |
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|
| EGAF00008771150 | cram | 274.1 MB |
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|
| EGAF00008771151 | cram | 327.5 MB |
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|
| EGAF00008771152 | cram | 291.1 MB |
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|
| EGAF00008771153 | cram | 4.4 GB |
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|
| EGAF00008771154 | cram | 392.7 MB |
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|
| EGAF00008771155 | cram | 259.9 MB |
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| EGAF00008771156 | cram | 233.5 MB |
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|
| EGAF00008771157 | cram | 279.0 MB |
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|
| EGAF00008771158 | cram | 452.1 MB |
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| EGAF00008771159 | cram | 179.4 MB |
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| EGAF00008771160 | cram | 214.9 MB |
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| EGAF00008771161 | cram | 231.1 MB |
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| EGAF00008771162 | cram | 395.1 MB |
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|
| EGAF00008771163 | cram | 258.1 MB |
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|
| 336 Files (605.5 GB) | ||||