About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
Need Help?

Single-cell RNA-sequencing of human duodenum organoids with modulation of Wnt signalling

Human duodenum organoids were cultured for 7 days. They were then treated in several groups with ENR or ENR+WNT3A for different time periods. Single-cell RNA-sequencing was then performed to determine the differences in their gene expression profiles. For full method details, please see the associated paper "Identifying phenotype-genotype-function coupling in 3D organoid imaging using Shape, Appearance and Motion Phenotype Observation Tool (SPOT)".

Request Access

SPOT Data Access Policy

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001006912 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00007888330 fastq.gz 485.8 MB
EGAF00007888331 fastq.gz 1.8 GB
EGAF00007888332 fastq.gz 489.2 MB
EGAF00007888333 fastq.gz 1.8 GB
EGAF00007888334 fastq.gz 495.2 MB
EGAF00007888335 fastq.gz 1.8 GB
EGAF00007888336 fastq.gz 491.0 MB
EGAF00007888337 fastq.gz 1.8 GB
EGAF00007888338 fastq.gz 173.2 MB
EGAF00007888339 fastq.gz 631.7 MB
EGAF00007888340 fastq.gz 172.3 MB
EGAF00007888341 fastq.gz 624.6 MB
EGAF00007888342 fastq.gz 175.8 MB
EGAF00007888343 fastq.gz 641.4 MB
EGAF00007888344 fastq.gz 172.8 MB
EGAF00007888345 fastq.gz 631.0 MB
EGAF00007888346 fastq.gz 513.7 MB
EGAF00007888347 fastq.gz 1.9 GB
EGAF00007888348 fastq.gz 517.0 MB
EGAF00007888349 fastq.gz 1.9 GB
EGAF00007888350 fastq.gz 523.1 MB
EGAF00007888351 fastq.gz 1.9 GB
EGAF00007888352 fastq.gz 518.6 MB
EGAF00007888353 fastq.gz 1.9 GB
EGAF00007888354 fastq.gz 446.5 MB
EGAF00007888355 fastq.gz 1.7 GB
EGAF00007888356 fastq.gz 443.3 MB
EGAF00007888357 fastq.gz 1.6 GB
EGAF00007888358 fastq.gz 452.7 MB
EGAF00007888359 fastq.gz 1.7 GB
EGAF00007888360 fastq.gz 444.2 MB
EGAF00007888361 fastq.gz 1.7 GB
EGAF00007888362 fastq.gz 488.0 MB
EGAF00007888363 fastq.gz 1.8 GB
EGAF00007888364 fastq.gz 490.1 MB
EGAF00007888365 fastq.gz 1.8 GB
EGAF00007888366 fastq.gz 484.1 MB
EGAF00007888367 fastq.gz 1.8 GB
EGAF00007888368 fastq.gz 503.9 MB
EGAF00007888369 fastq.gz 1.8 GB
EGAF00007888370 fastq.gz 390.7 MB
EGAF00007888371 fastq.gz 1.4 GB
EGAF00007888372 fastq.gz 393.1 MB
EGAF00007888373 fastq.gz 1.4 GB
EGAF00007888374 fastq.gz 398.2 MB
EGAF00007888375 fastq.gz 1.5 GB
EGAF00007888376 fastq.gz 394.7 MB
EGAF00007888377 fastq.gz 1.4 GB
EGAF00007888378 fastq.gz 374.8 MB
EGAF00007888379 fastq.gz 1.4 GB
EGAF00007888380 fastq.gz 377.1 MB
EGAF00007888381 fastq.gz 1.4 GB
EGAF00007888382 fastq.gz 381.9 MB
EGAF00007888383 fastq.gz 1.4 GB
EGAF00007888384 fastq.gz 378.6 MB
EGAF00007888385 fastq.gz 1.4 GB
EGAF00007888386 fastq.gz 468.8 MB
EGAF00007888387 fastq.gz 1.8 GB
EGAF00007888388 fastq.gz 471.1 MB
EGAF00007888389 fastq.gz 1.8 GB
EGAF00007888390 fastq.gz 465.2 MB
EGAF00007888391 fastq.gz 1.7 GB
EGAF00007888392 fastq.gz 483.9 MB
EGAF00007888393 fastq.gz 1.8 GB
64 Files (62.9 GB)