MassArray1-80
234 samples genotyped at 40 loci using the MassArrayiPLEX genotyping assay using the iPLEX Gold genotyping kit (Agena Biosciences, cat. 10148-2) Gabriel et al. (2009) [Gabriel, S. , Ziaugra, L. and Tabbaa, D. (2009), SNP Genotyping Using the Sequenom MassARRAY iPLEX Platform. Current Protocols in Human Genetics, 60: 2.12.1-2.12.18. doi:10.1002/0471142905.hg0212s60]). Products were detected on a MassArray mass spectrophotometer and data were acquired in real time with MassArray RT software 4.0.0.2 (Agena Biosciences). SNP clustering and validation was carried out with Typer 4.0.26.75 software (Agena Biosciences).
- 11/06/2020
- 233 samples
- DAC: EGAC00001001539
- Technology: MassArrayiPLEX genotyping assay using the iPLEX Gold genotyping kit
H3Africa Data Sharing Policy
Principles for the H3Africa Initiative data sharing, access and release policy include: •Maximizing the availability of research data, in a timely and responsible manner. •Protecting the rights and privacy of human subjects who participated in research studies. •Recognizing the scientific contribution of researchers who generated the data. •Considering the nature and ethical aspects of proposed research whilst ensuring the timely release of data •Promoting deposition of genomic data in existing community data repositories whenever possible.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001004365 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF00004038813 | vcf | 1.7 kB | ||
| EGAF00004038816 | vcf | 1.7 kB | ||
| EGAF00004038821 | vcf | 1.7 kB | ||
| EGAF00004038822 | vcf | 1.7 kB | ||
| EGAF00004038825 | vcf | 1.7 kB | ||
| EGAF00004038827 | vcf | 1.7 kB | ||
| EGAF00004038828 | vcf | 1.7 kB | ||
| EGAF00004038829 | vcf | 1.7 kB | ||
| EGAF00004038831 | vcf | 1.7 kB | ||
| EGAF00004038832 | vcf | 1.7 kB | ||
| EGAF00004038833 | vcf | 1.7 kB | ||
| EGAF00004038835 | vcf | 1.7 kB | ||
| EGAF00004038837 | vcf | 1.7 kB | ||
| EGAF00004038840 | vcf | 1.7 kB | ||
| EGAF00004038843 | vcf | 1.7 kB | ||
| EGAF00004038844 | vcf | 1.7 kB | ||
| EGAF00004038847 | vcf | 1.7 kB | ||
| EGAF00004038848 | vcf | 1.7 kB | ||
| EGAF00004038851 | vcf | 1.7 kB | ||
| EGAF00004038853 | vcf | 1.7 kB | ||
| EGAF00004038855 | vcf | 1.7 kB | ||
| EGAF00004038860 | vcf | 1.7 kB | ||
| EGAF00004038861 | vcf | 1.7 kB | ||
| EGAF00004038864 | vcf | 1.7 kB | ||
| EGAF00004038865 | vcf | 1.7 kB | ||
| EGAF00004038867 | vcf | 1.7 kB | ||
| EGAF00004038869 | vcf | 1.7 kB | ||
| EGAF00004038870 | vcf | 1.7 kB | ||
| EGAF00004038877 | vcf | 1.7 kB | ||
| EGAF00004038878 | vcf | 1.7 kB | ||
| EGAF00004038879 | vcf | 1.7 kB | ||
| EGAF00004038882 | csv | 434.1 kB | ||
| EGAF00004038883 | vcf | 1.7 kB | ||
| EGAF00004038884 | vcf | 1.7 kB | ||
| EGAF00004038885 | vcf | 1.7 kB | ||
| EGAF00004038887 | vcf | 1.7 kB | ||
| EGAF00004038888 | vcf | 1.7 kB | ||
| EGAF00004038891 | vcf | 1.7 kB | ||
| EGAF00004038892 | vcf | 1.7 kB | ||
| EGAF00004038893 | vcf | 1.7 kB | ||
| EGAF00004038895 | vcf | 1.7 kB | ||
| EGAF00004038896 | vcf | 1.7 kB | ||
| EGAF00004038897 | vcf | 1.7 kB | ||
| EGAF00004038898 | vcf | 1.7 kB | ||
| EGAF00004038900 | vcf | 1.7 kB | ||
| EGAF00004038902 | vcf | 1.7 kB | ||
| EGAF00004038903 | vcf | 1.7 kB | ||
| EGAF00004038904 | vcf | 1.7 kB | ||
| EGAF00004038906 | vcf | 1.7 kB | ||
| EGAF00004038908 | vcf | 1.7 kB | ||
| EGAF00004038909 | vcf | 1.7 kB | ||
| EGAF00004038910 | vcf | 1.7 kB | ||
| EGAF00004038912 | vcf | 1.7 kB | ||
| EGAF00004038914 | vcf | 1.7 kB | ||
| EGAF00004038915 | vcf | 1.7 kB | ||
| EGAF00004038919 | vcf | 1.7 kB | ||
| EGAF00004038922 | vcf | 1.7 kB | ||
| EGAF00004038923 | vcf | 1.7 kB | ||
| EGAF00004038924 | vcf | 1.7 kB | ||
| EGAF00004038927 | vcf | 1.7 kB | ||
| EGAF00004038929 | vcf | 1.7 kB | ||
| EGAF00004038930 | vcf | 1.7 kB | ||
| EGAF00004038932 | vcf | 1.7 kB | ||
| EGAF00004038933 | vcf | 1.7 kB | ||
| EGAF00004038935 | vcf | 1.7 kB | ||
| EGAF00004038940 | vcf | 1.7 kB | ||
| EGAF00004038941 | vcf | 1.7 kB | ||
| EGAF00004038942 | vcf | 1.7 kB | ||
| EGAF00004038944 | vcf | 1.7 kB | ||
| EGAF00004038946 | vcf | 1.7 kB | ||
| EGAF00004038947 | vcf | 1.7 kB | ||
| EGAF00004038948 | vcf | 1.7 kB | ||
| EGAF00004038949 | vcf | 1.7 kB | ||
| EGAF00004038954 | vcf | 1.7 kB | ||
| EGAF00004038955 | vcf | 1.7 kB | ||
| EGAF00004038956 | vcf | 1.7 kB | ||
| EGAF00004038957 | vcf | 1.7 kB | ||
| EGAF00004038959 | vcf | 1.7 kB | ||
| EGAF00004038961 | vcf | 1.7 kB | ||
| EGAF00004038963 | vcf | 1.7 kB | ||
| EGAF00004038967 | vcf | 1.7 kB | ||
| EGAF00004038969 | vcf | 1.7 kB | ||
| EGAF00004038970 | vcf | 1.7 kB | ||
| EGAF00004038972 | vcf | 1.7 kB | ||
| EGAF00004038973 | vcf | 1.7 kB | ||
| EGAF00004038976 | vcf | 1.7 kB | ||
| EGAF00004038982 | vcf | 1.7 kB | ||
| EGAF00004038986 | vcf | 1.7 kB | ||
| EGAF00004038988 | vcf | 1.7 kB | ||
| EGAF00004038990 | vcf | 1.7 kB | ||
| EGAF00004038991 | vcf | 1.7 kB | ||
| EGAF00004038992 | vcf | 1.7 kB | ||
| EGAF00004038994 | vcf | 1.7 kB | ||
| EGAF00004038998 | vcf | 1.7 kB | ||
| EGAF00004038999 | vcf | 1.7 kB | ||
| EGAF00004039000 | vcf | 1.7 kB | ||
| EGAF00004039003 | vcf | 1.7 kB | ||
| EGAF00004039007 | vcf | 1.7 kB | ||
| EGAF00004039009 | vcf | 1.7 kB | ||
| EGAF00004039010 | vcf | 1.7 kB | ||
| EGAF00004039011 | vcf | 1.7 kB | ||
| EGAF00004039012 | vcf | 1.7 kB | ||
| EGAF00004039015 | vcf | 1.7 kB | ||
| EGAF00004039018 | vcf | 1.7 kB | ||
| EGAF00004039023 | vcf | 1.7 kB | ||
| EGAF00004039024 | vcf | 1.7 kB | ||
| EGAF00004039025 | vcf | 1.7 kB | ||
| EGAF00004039029 | vcf | 1.7 kB | ||
| EGAF00004039030 | vcf | 1.7 kB | ||
| EGAF00004039031 | vcf | 1.7 kB | ||
| EGAF00004039032 | vcf | 1.7 kB | ||
| EGAF00004039034 | vcf | 1.7 kB | ||
| EGAF00004039036 | vcf | 1.7 kB | ||
| EGAF00004039039 | vcf | 1.7 kB | ||
| EGAF00004039040 | vcf | 1.7 kB | ||
| EGAF00004039041 | vcf | 1.7 kB | ||
| EGAF00004039042 | vcf | 1.7 kB | ||
| EGAF00004039043 | vcf | 1.7 kB | ||
| EGAF00004039045 | vcf | 1.7 kB | ||
| EGAF00004039046 | vcf | 1.7 kB | ||
| EGAF00004039051 | vcf | 1.7 kB | ||
| EGAF00004039055 | vcf | 1.7 kB | ||
| EGAF00004039057 | vcf | 1.7 kB | ||
| EGAF00004039059 | vcf | 1.7 kB | ||
| EGAF00004039062 | vcf | 1.7 kB | ||
| EGAF00004039065 | vcf | 1.7 kB | ||
| EGAF00004039068 | vcf | 1.7 kB | ||
| EGAF00004039071 | vcf | 1.7 kB | ||
| EGAF00004039072 | vcf | 1.7 kB | ||
| EGAF00004039073 | vcf | 1.7 kB | ||
| EGAF00004039078 | vcf | 1.7 kB | ||
| EGAF00004039080 | vcf | 1.7 kB | ||
| EGAF00004039082 | vcf | 1.7 kB | ||
| EGAF00004039084 | vcf | 1.7 kB | ||
| EGAF00004039086 | vcf | 1.7 kB | ||
| EGAF00004039089 | vcf | 1.7 kB | ||
| EGAF00004039090 | vcf | 1.7 kB | ||
| EGAF00004039092 | vcf | 1.7 kB | ||
| EGAF00004039093 | vcf | 1.7 kB | ||
| EGAF00004039094 | vcf | 1.7 kB | ||
| EGAF00004039095 | vcf | 1.7 kB | ||
| EGAF00004039096 | vcf | 1.7 kB | ||
| EGAF00004039102 | vcf | 1.7 kB | ||
| EGAF00004039104 | vcf | 1.7 kB | ||
| EGAF00004039106 | vcf | 1.7 kB | ||
| EGAF00004039107 | vcf | 1.7 kB | ||
| EGAF00004039111 | vcf | 1.7 kB | ||
| EGAF00004039112 | vcf | 1.7 kB | ||
| EGAF00004039113 | vcf | 1.7 kB | ||
| EGAF00004039115 | vcf | 1.7 kB | ||
| EGAF00004039119 | vcf | 1.7 kB | ||
| EGAF00004039121 | vcf | 1.7 kB | ||
| EGAF00004039122 | vcf | 1.7 kB | ||
| EGAF00004039123 | vcf | 1.7 kB | ||
| EGAF00004039127 | vcf | 1.7 kB | ||
| EGAF00004039128 | vcf | 1.7 kB | ||
| EGAF00004039129 | vcf | 1.7 kB | ||
| EGAF00004039130 | vcf | 1.7 kB | ||
| EGAF00004039131 | vcf | 1.7 kB | ||
| EGAF00004039132 | vcf | 1.7 kB | ||
| EGAF00004039134 | vcf | 1.7 kB | ||
| EGAF00004039135 | vcf | 1.7 kB | ||
| EGAF00004039136 | vcf | 1.7 kB | ||
| EGAF00004039139 | vcf | 1.7 kB | ||
| EGAF00004039143 | vcf | 1.7 kB | ||
| EGAF00004039145 | vcf | 1.7 kB | ||
| EGAF00004039146 | vcf | 1.7 kB | ||
| EGAF00004039150 | vcf | 1.7 kB | ||
| EGAF00004039152 | vcf | 1.7 kB | ||
| EGAF00004039154 | vcf | 1.7 kB | ||
| EGAF00004039156 | vcf | 1.7 kB | ||
| EGAF00004039157 | vcf | 1.7 kB | ||
| EGAF00004039158 | vcf | 1.7 kB | ||
| EGAF00004039159 | vcf | 1.7 kB | ||
| EGAF00004039163 | vcf | 1.7 kB | ||
| EGAF00004039164 | vcf | 1.7 kB | ||
| EGAF00004039168 | vcf | 1.7 kB | ||
| EGAF00004039169 | vcf | 1.7 kB | ||
| EGAF00004039171 | vcf | 1.7 kB | ||
| EGAF00004039172 | vcf | 1.7 kB | ||
| EGAF00004039174 | vcf | 1.7 kB | ||
| EGAF00004039175 | vcf | 1.7 kB | ||
| EGAF00004039178 | vcf | 1.7 kB | ||
| EGAF00004039181 | vcf | 1.7 kB | ||
| EGAF00004039185 | vcf | 1.7 kB | ||
| EGAF00004039186 | vcf | 1.7 kB | ||
| EGAF00004039187 | vcf | 1.7 kB | ||
| EGAF00004039188 | vcf | 1.7 kB | ||
| EGAF00004039189 | vcf | 1.7 kB | ||
| EGAF00004039190 | vcf | 1.7 kB | ||
| EGAF00004039191 | vcf | 1.7 kB | ||
| EGAF00004039192 | vcf | 1.7 kB | ||
| EGAF00004039194 | vcf | 1.7 kB | ||
| EGAF00004039195 | vcf | 1.7 kB | ||
| EGAF00004039196 | vcf | 1.7 kB | ||
| EGAF00004039198 | vcf | 1.7 kB | ||
| EGAF00004039199 | vcf | 1.7 kB | ||
| EGAF00004039200 | vcf | 1.7 kB | ||
| EGAF00004039201 | vcf | 1.7 kB | ||
| EGAF00004039203 | vcf | 1.7 kB | ||
| EGAF00004039204 | vcf | 1.7 kB | ||
| EGAF00004039209 | vcf | 1.7 kB | ||
| EGAF00004039210 | vcf | 1.7 kB | ||
| EGAF00004039215 | vcf | 1.7 kB | ||
| EGAF00004039216 | vcf | 1.7 kB | ||
| EGAF00004039217 | vcf | 1.7 kB | ||
| EGAF00004039218 | vcf | 1.7 kB | ||
| EGAF00004039220 | vcf | 1.7 kB | ||
| EGAF00004039226 | vcf | 1.7 kB | ||
| EGAF00004039228 | vcf | 1.7 kB | ||
| EGAF00004039231 | vcf | 1.7 kB | ||
| EGAF00004039234 | vcf | 1.7 kB | ||
| EGAF00004039236 | vcf | 1.7 kB | ||
| EGAF00004039237 | vcf | 1.7 kB | ||
| EGAF00004039238 | vcf | 1.7 kB | ||
| EGAF00004039241 | vcf | 1.7 kB | ||
| EGAF00004039242 | vcf | 1.7 kB | ||
| EGAF00004039243 | vcf | 1.7 kB | ||
| EGAF00004039244 | vcf | 1.7 kB | ||
| EGAF00004039245 | vcf | 1.7 kB | ||
| EGAF00004039246 | vcf | 1.7 kB | ||
| EGAF00004039248 | vcf | 1.7 kB | ||
| EGAF00004039249 | vcf | 1.7 kB | ||
| EGAF00004039250 | vcf | 1.7 kB | ||
| EGAF00004039253 | vcf | 1.7 kB | ||
| EGAF00004039256 | vcf | 1.7 kB | ||
| EGAF00004039260 | vcf | 1.7 kB | ||
| EGAF00004039261 | vcf | 1.7 kB | ||
| EGAF00004039266 | vcf | 1.7 kB | ||
| EGAF00004039268 | vcf | 1.7 kB | ||
| EGAF00004039269 | vcf | 1.7 kB | ||
| EGAF00004039271 | vcf | 1.7 kB | ||
| EGAF00004039273 | vcf | 1.7 kB | ||
| EGAF00004039277 | vcf | 1.7 kB | ||
| 234 Files (824.1 kB) | ||||