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Single-nucleus mRNA-Sequencing of prenatal and postnatal samples from the brain and its border regions

Single-nucleus mRNA Sequencing of prenatal and postnatal samples from the brain and its border regions. Most samples were multiplexed with several samples run in one 10X reaction. A separate immune cell dataset was combined with published data from Braun et al 2023 and Yang et al 2021 integrated using harmony is included.

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Institute of Neuropathology

The data access agreement is regulated within the European standardized framework for data integration and data-driven in silico models for personalized medicine - EU_STANDS4PM

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000030 Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000048675 fastq.gz 4.5 MB
EGAF50000048676 fastq.gz 6.9 MB
EGAF50000048677 fastq.gz 4.5 MB
EGAF50000048678 fastq.gz 7.0 MB
EGAF50000048679 fastq.gz 4.6 MB
EGAF50000048680 fastq.gz 4.5 MB
EGAF50000048681 fastq.gz 7.1 MB
EGAF50000048682 fastq.gz 2.9 MB
EGAF50000048683 fastq.gz 7.0 MB
EGAF50000048684 fastq.gz 4.4 MB
EGAF50000048685 fastq.gz 3.0 MB
EGAF50000048686 fastq.gz 3.0 MB
EGAF50000048687 fastq.gz 4.5 MB
EGAF50000048688 fastq.gz 2.9 MB
EGAF50000048689 fastq.gz 4.5 MB
EGAF50000048690 fastq.gz 3.3 MB
EGAF50000048691 fastq.gz 4.5 MB
EGAF50000048692 fastq.gz 3.3 MB
EGAF50000048693 fastq.gz 5.0 MB
EGAF50000048694 fastq.gz 3.3 MB
EGAF50000048695 fastq.gz 5.0 MB
EGAF50000048696 fastq.gz 3.3 MB
EGAF50000048697 fastq.gz 5.1 MB
EGAF50000048698 fastq.gz 5.1 MB
EGAF50000048699 fastq.gz 188.8 MB
EGAF50000048700 fastq.gz 7.2 MB
EGAF50000048701 fastq.gz 502.6 MB
EGAF50000048702 fastq.gz 11.0 MB
EGAF50000048703 fastq.gz 7.3 MB
EGAF50000048704 fastq.gz 11.3 MB
EGAF50000048705 fastq.gz 7.4 MB
EGAF50000048706 fastq.gz 11.5 MB
EGAF50000048707 fastq.gz 7.4 MB
EGAF50000048708 fastq.gz 410.5 MB
EGAF50000048709 fastq.gz 11.4 MB
EGAF50000048710 fastq.gz 6.2 MB
EGAF50000048711 fastq.gz 9.5 MB
EGAF50000048712 fastq.gz 6.3 MB
EGAF50000048713 fastq.gz 9.8 MB
EGAF50000048714 fastq.gz 6.4 MB
EGAF50000048715 fastq.gz 9.8 MB
EGAF50000048716 fastq.gz 6.4 MB
EGAF50000048717 fastq.gz 9.9 MB
EGAF50000048718 fastq.gz 5.6 MB
EGAF50000048719 fastq.gz 8.6 MB
EGAF50000048720 fastq.gz 5.8 MB
EGAF50000048721 fastq.gz 8.9 MB
EGAF50000048722 fastq.gz 5.8 MB
EGAF50000048723 fastq.gz 8.9 MB
EGAF50000048724 fastq.gz 5.8 MB
EGAF50000048725 fastq.gz 8.9 MB
EGAF50000048726 fastq.gz 6.3 MB
EGAF50000048727 fastq.gz 9.6 MB
EGAF50000048728 fastq.gz 6.4 MB
EGAF50000048729 fastq.gz 9.9 MB
EGAF50000048730 fastq.gz 6.4 MB
EGAF50000048731 fastq.gz 9.9 MB
EGAF50000048732 fastq.gz 6.4 MB
EGAF50000048733 fastq.gz 9.9 MB
EGAF50000048734 fastq.gz 3.7 MB
EGAF50000048735 fastq.gz 5.7 MB
EGAF50000048736 fastq.gz 3.8 MB
EGAF50000048737 fastq.gz 5.8 MB
EGAF50000048738 fastq.gz 3.8 MB
EGAF50000048739 fastq.gz 5.8 MB
EGAF50000048740 fastq.gz 3.8 MB
EGAF50000048741 fastq.gz 5.8 MB
EGAF50000048742 fastq.gz 554.5 MB
EGAF50000048743 fastq.gz 1.1 GB
EGAF50000048744 fastq.gz 560.8 MB
EGAF50000048745 fastq.gz 866.5 MB
EGAF50000048746 fastq.gz 565.7 MB
EGAF50000048747 fastq.gz 877.2 MB
EGAF50000048748 fastq.gz 561.3 MB
EGAF50000048749 fastq.gz 889.7 MB
EGAF50000048750 fastq.gz 456.0 MB
EGAF50000048751 fastq.gz 882.2 MB
EGAF50000048752 fastq.gz 461.1 MB
EGAF50000048753 fastq.gz 711.1 MB
EGAF50000048754 fastq.gz 465.2 MB
EGAF50000048755 fastq.gz 719.7 MB
EGAF50000048756 fastq.gz 461.8 MB
EGAF50000048757 fastq.gz 730.3 MB
EGAF50000048758 fastq.gz 492.5 MB
EGAF50000048759 fastq.gz 724.2 MB
EGAF50000048760 fastq.gz 498.8 MB
EGAF50000048761 fastq.gz 766.4 MB
EGAF50000048762 fastq.gz 502.2 MB
EGAF50000048763 fastq.gz 777.3 MB
EGAF50000048764 fastq.gz 499.4 MB
EGAF50000048765 fastq.gz 787.0 MB
EGAF50000048766 fastq.gz 451.8 MB
EGAF50000048767 fastq.gz 782.0 MB
EGAF50000048768 fastq.gz 457.9 MB
EGAF50000048769 fastq.gz 704.2 MB
EGAF50000048770 fastq.gz 461.9 MB
EGAF50000048771 fastq.gz 714.3 MB
EGAF50000048772 fastq.gz 458.9 MB
EGAF50000048773 fastq.gz 724.7 MB
EGAF50000048774 fastq.gz 153.8 MB
EGAF50000048775 fastq.gz 239.7 MB
EGAF50000048776 fastq.gz 157.8 MB
EGAF50000048777 fastq.gz 719.1 MB
EGAF50000048778 fastq.gz 158.3 MB
EGAF50000048779 fastq.gz 246.7 MB
EGAF50000048780 fastq.gz 158.5 MB
EGAF50000048781 fastq.gz 248.4 MB
EGAF50000048782 fastq.gz 126.4 MB
EGAF50000048783 fastq.gz 249.0 MB
EGAF50000048784 fastq.gz 196.6 MB
EGAF50000048785 fastq.gz 129.7 MB
EGAF50000048786 fastq.gz 130.2 MB
EGAF50000048787 fastq.gz 202.2 MB
EGAF50000048788 fastq.gz 130.4 MB
EGAF50000048789 fastq.gz 203.8 MB
EGAF50000048790 fastq.gz 136.9 MB
EGAF50000048791 fastq.gz 204.2 MB
EGAF50000048792 fastq.gz 140.6 MB
EGAF50000048793 fastq.gz 212.5 MB
EGAF50000048794 fastq.gz 140.7 MB
EGAF50000048795 fastq.gz 218.9 MB
EGAF50000048796 fastq.gz 141.4 MB
EGAF50000048797 fastq.gz 220.0 MB
EGAF50000048798 fastq.gz 124.8 MB
EGAF50000048799 fastq.gz 221.2 MB
EGAF50000048800 fastq.gz 128.4 MB
EGAF50000048801 fastq.gz 194.1 MB
EGAF50000048802 fastq.gz 128.7 MB
EGAF50000048803 fastq.gz 200.1 MB
EGAF50000048804 fastq.gz 128.9 MB
EGAF50000048805 fastq.gz 201.4 MB
EGAF50000048806 fastq.gz 201.9 MB
EGAF50000048829 fastq.gz 110.1 MB
EGAF50000048830 fastq.gz 183.0 MB
EGAF50000048831 fastq.gz 118.1 MB
EGAF50000048832 fastq.gz 195.1 MB
EGAF50000048833 fastq.gz 116.8 MB
EGAF50000048834 fastq.gz 192.3 MB
EGAF50000048835 fastq.gz 118.3 MB
EGAF50000048836 fastq.gz 194.3 MB
EGAF50000048837 fastq.gz 96.0 MB
EGAF50000048838 fastq.gz 159.2 MB
EGAF50000048839 fastq.gz 102.9 MB
EGAF50000048840 fastq.gz 169.9 MB
EGAF50000048841 fastq.gz 101.8 MB
EGAF50000048842 fastq.gz 167.4 MB
EGAF50000048843 fastq.gz 103.0 MB
EGAF50000048844 fastq.gz 96.1 MB
EGAF50000048845 fastq.gz 168.9 MB
EGAF50000048846 fastq.gz 103.3 MB
EGAF50000048847 fastq.gz 159.6 MB
EGAF50000048848 fastq.gz 101.9 MB
EGAF50000048849 fastq.gz 170.6 MB
EGAF50000048850 fastq.gz 103.4 MB
EGAF50000048851 fastq.gz 24.2 MB
EGAF50000048852 fastq.gz 167.8 MB
EGAF50000048853 fastq.gz 42.6 MB
EGAF50000048854 fastq.gz 25.4 MB
EGAF50000048855 fastq.gz 45.2 MB
EGAF50000048856 fastq.gz 25.2 MB
EGAF50000048857 fastq.gz 169.7 MB
EGAF50000048858 fastq.gz 25.4 MB
EGAF50000048859 fastq.gz 44.2 MB
EGAF50000048860 fastq.gz 30.0 MB
EGAF50000048861 fastq.gz 44.5 MB
EGAF50000048862 fastq.gz 31.5 MB
EGAF50000048863 fastq.gz 52.7 MB
EGAF50000048864 fastq.gz 31.3 MB
EGAF50000048865 fastq.gz 55.8 MB
EGAF50000048866 fastq.gz 31.5 MB
EGAF50000048867 fastq.gz 54.7 MB
EGAF50000048868 fastq.gz 26.0 MB
EGAF50000048869 fastq.gz 55.0 MB
EGAF50000048870 fastq.gz 27.3 MB
EGAF50000048871 fastq.gz 45.7 MB
EGAF50000048872 fastq.gz 27.1 MB
EGAF50000048873 fastq.gz 48.5 MB
EGAF50000048874 fastq.gz 27.3 MB
EGAF50000048875 fastq.gz 47.5 MB
EGAF50000048876 fastq.gz 26.0 MB
EGAF50000048877 fastq.gz 47.7 MB
EGAF50000048878 fastq.gz 27.4 MB
EGAF50000048879 fastq.gz 45.8 MB
EGAF50000048880 fastq.gz 27.1 MB
EGAF50000048881 fastq.gz 48.7 MB
EGAF50000048882 fastq.gz 27.4 MB
EGAF50000048883 fastq.gz 47.5 MB
EGAF50000048884 fastq.gz 47.9 MB
EGAF50000048885 fastq.gz 76.8 MB
EGAF50000048886 fastq.gz 129.5 MB
EGAF50000048887 fastq.gz 82.5 MB
EGAF50000048888 fastq.gz 139.2 MB
EGAF50000048889 fastq.gz 2.2 GB
EGAF50000048890 fastq.gz 81.6 MB
EGAF50000048891 fastq.gz 82.3 MB
EGAF50000048892 fastq.gz 136.4 MB
EGAF50000048893 fastq.gz 137.5 MB
EGAF50000048894 fastq.gz 94.7 MB
EGAF50000048895 fastq.gz 101.6 MB
EGAF50000048896 fastq.gz 159.5 MB
EGAF50000048897 fastq.gz 100.6 MB
EGAF50000048898 fastq.gz 171.3 MB
EGAF50000048899 fastq.gz 2.7 GB
EGAF50000048900 fastq.gz 101.3 MB
EGAF50000048901 fastq.gz 168.2 MB
EGAF50000048902 fastq.gz 82.5 MB
EGAF50000048903 fastq.gz 169.0 MB
EGAF50000048904 fastq.gz 88.6 MB
EGAF50000048905 fastq.gz 138.8 MB
EGAF50000048906 fastq.gz 87.7 MB
EGAF50000048907 fastq.gz 149.2 MB
EGAF50000048908 fastq.gz 88.2 MB
EGAF50000048909 fastq.gz 146.3 MB
EGAF50000048910 fastq.gz 82.8 MB
EGAF50000048911 fastq.gz 147.1 MB
EGAF50000048912 fastq.gz 139.3 MB
EGAF50000048913 fastq.gz 88.9 MB
EGAF50000048914 fastq.gz 87.8 MB
EGAF50000048915 fastq.gz 149.7 MB
EGAF50000048916 fastq.gz 88.6 MB
EGAF50000048917 fastq.gz 146.6 MB
EGAF50000048918 fastq.gz 89.3 MB
EGAF50000048919 fastq.gz 147.7 MB
EGAF50000048920 fastq.gz 95.8 MB
EGAF50000048921 fastq.gz 148.5 MB
EGAF50000048922 fastq.gz 94.7 MB
EGAF50000048923 fastq.gz 158.5 MB
EGAF50000048924 fastq.gz 96.1 MB
EGAF50000048925 fastq.gz 156.1 MB
EGAF50000048926 fastq.gz 158.1 MB
EGAF50000048941 fastq.gz 1.8 GB
EGAF50000048942 fastq.gz 659.2 MB
EGAF50000048943 fastq.gz 1.4 GB
EGAF50000048944 fastq.gz 405.7 MB
EGAF50000048945 fastq.gz 530.2 MB
EGAF50000048946 fastq.gz 3.3 GB
EGAF50000048947 fastq.gz 860.2 MB
EGAF50000048948 fastq.gz 1.1 GB
EGAF50000049005 fastq.gz 1.1 GB
EGAF50000049006 fastq.gz 523.6 MB
EGAF50000049007 fastq.gz 292.6 MB
EGAF50000049008 fastq.gz 2.0 GB
EGAF50000049009 fastq.gz 844 Bytes
EGAF50000049010 fastq.gz 3.1 GB
EGAF50000049011 fastq.gz 3.0 GB
EGAF50000049012 fastq.gz 1.5 kB
EGAF50000049013 fastq.gz 330.2 MB
EGAF50000049014 fastq.gz 1.3 GB
EGAF50000049015 fastq.gz 236.2 MB
EGAF50000049016 fastq.gz 815.6 MB
EGAF50000049017 fastq.gz 410.0 MB
EGAF50000049018 fastq.gz 7.1 GB
EGAF50000049019 fastq.gz 1.4 GB
EGAF50000049020 fastq.gz 754.7 MB
EGAF50000049021 fastq.gz 1.7 GB
EGAF50000049022 fastq.gz 589.4 MB
EGAF50000049023 fastq.gz 1.4 GB
EGAF50000049024 fastq.gz 1.4 GB
EGAF50000049025 fastq.gz 3.2 GB
EGAF50000049026 fastq.gz 2.6 GB
EGAF50000049027 fastq.gz 276.6 MB
EGAF50000049028 fastq.gz 3.2 GB
EGAF50000049029 fastq.gz 1.3 GB
EGAF50000049030 fastq.gz 1.1 GB
EGAF50000049031 fastq.gz 465.8 MB
EGAF50000049032 fastq.gz 1.1 GB
EGAF50000049033 fastq.gz 1.3 GB
EGAF50000049034 fastq.gz 1.1 GB
EGAF50000049035 fastq.gz 2.4 GB
EGAF50000049036 fastq.gz 3.1 GB
EGAF50000049037 fastq.gz 492.0 MB
EGAF50000049038 fastq.gz 2.5 GB
EGAF50000049039 fastq.gz 550.3 MB
EGAF50000049040 fastq.gz 831.1 MB
EGAF50000049041 fastq.gz 940.4 MB
EGAF50000049042 fastq.gz 1.0 GB
EGAF50000049043 fastq.gz 11.1 MB
EGAF50000049044 fastq.gz 1.4 GB
EGAF50000049046 fastq.gz 2.3 GB
EGAF50000049048 fastq.gz 23.9 MB
EGAF50000049049 fastq.gz 446.0 MB
EGAF50000049050 fastq.gz 3.1 GB
EGAF50000049051 fastq.gz 610.8 MB
EGAF50000049052 fastq.gz 738.7 MB
EGAF50000049053 fastq.gz 1.0 GB
EGAF50000049054 fastq.gz 240.7 MB
EGAF50000049055 fastq.gz 2.3 GB
EGAF50000049056 fastq.gz 493.6 MB
EGAF50000049057 fastq.gz 416.9 MB
EGAF50000049058 fastq.gz 557.9 MB
EGAF50000049059 fastq.gz 185.6 MB
EGAF50000049060 fastq.gz 1.5 GB
EGAF50000049061 fastq.gz 1.2 GB
EGAF50000049062 fastq.gz 3.3 GB
EGAF50000049063 fastq.gz 2.2 GB
EGAF50000049064 fastq.gz 441.4 MB
EGAF50000049065 fastq.gz 1.0 GB
EGAF50000049066 fastq.gz 763.4 MB
EGAF50000049067 fastq.gz 965.0 MB
EGAF50000049068 fastq.gz 1.8 GB
EGAF50000049069 fastq.gz 3.3 GB
EGAF50000049070 fastq.gz 1.5 GB
EGAF50000049071 fastq.gz 1.8 GB
EGAF50000049072 fastq.gz 3.5 GB
EGAF50000049081 csv 829 Bytes
EGAF50000049082 csv 792 Bytes
EGAF50000049083 csv 859 Bytes
EGAF50000049084 csv 853 Bytes
EGAF50000049085 csv 801 Bytes
EGAF50000049086 csv 790 Bytes
EGAF50000049123 h5 2.9 MB
EGAF50000049124 h5 5.2 MB
EGAF50000049125 h5 2.1 MB
EGAF50000049126 h5 10.6 MB
EGAF50000049127 h5 1.6 MB
EGAF50000049128 h5 2.1 MB
EGAF50000049129 h5 3.7 MB
EGAF50000049130 h5 3.2 MB
EGAF50000049131 h5 3.6 MB
EGAF50000049132 h5 2.9 MB
EGAF50000049133 h5 7.6 MB
EGAF50000049134 h5 2.9 MB
EGAF50000049135 h5 2.6 MB
EGAF50000049136 h5 2.0 MB
EGAF50000049137 h5 2.8 MB
EGAF50000049138 h5 1.9 MB
EGAF50000049139 h5 2.3 MB
EGAF50000049140 h5 6.2 MB
EGAF50000049141 h5 3.3 MB
EGAF50000049142 h5 1.5 MB
EGAF50000049143 h5 6.4 MB
EGAF50000049144 h5 1.2 MB
EGAF50000049145 h5 2.0 MB
EGAF50000049146 h5 1.6 MB
EGAF50000049147 h5 2.2 MB
EGAF50000049148 h5 1.9 MB
EGAF50000049149 h5 1.5 MB
EGAF50000049150 h5 3.6 MB
EGAF50000049151 h5 1.8 MB
EGAF50000049152 h5 1.3 MB
EGAF50000049153 h5 6.6 MB
EGAF50000049154 h5 8.9 MB
EGAF50000049155 h5 1.8 MB
EGAF50000049157 h5 9.6 MB
EGAF50000049160 h5 6.9 MB
EGAF50000049161 fastq.gz 1.4 GB
EGAF50000049162 fastq.gz 4.2 GB
EGAF50000049163 fastq.gz 418.5 MB
EGAF50000049164 fastq.gz 1.3 GB
EGAF50000049165 fastq.gz 841.3 MB
EGAF50000049166 fastq.gz 2.2 GB
EGAF50000049167 fastq.gz 2.3 GB
EGAF50000049168 fastq.gz 4.9 GB
EGAF50000049187 H5Seurat 871.2 MB
EGAF50000049191 H5Seurat 1.1 GB
355 Files (164.7 GB)