About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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10X Chromium 5' scRNA, scTCR and scBCR sequencing of pre- and on-treatment HNSCC biopsy samples

We performed 10X Chromium 5' scRNA (n=50), scTCR (n=48) and scBCR (n=49) sequencing of pre- and on-treatment HNSCC biopsy samples.

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VIB Policy for Data Access and Data Transfer

VIB Policy for Data Access and Data Transfer Applicability This policy applies to the access to and transfer of VIB research datasets that contain non-anonymous Personal Data which are subject to the provisions of the General Data Protection Regulation (EU) 2016/679. Access/transfer conditions - The access/transfer is subject to approval by the VIB Data Access Committee. - The proposed research purpose should not be incompatible with the primary research purpose for which the data were originally generated. - The Recipient shall have in place adequate safeguards for the protection of Personal Data. - Access is subject to a Data Transfer/Access Agreement which will be managed by VIB Innovation & Business. - The Data Transfer/Access will be limited to the Data that are necessary for the proposed research. Access/transfer procedure - Requests to access or obtain non-anonymous datasets should be submitted to the responsible corresponding author that has uploaded the dataset into the repository, and with a copy to dac@vib.be. - The request should contain the following information: o Name, affiliation (legal entity) and contact information of the requesting recipient party. o Reference to the specific dataset(s) for which access or transfer is requested. o Description of the research purpose for which the data will be used. - The VIB Data Access Committee takes decisions to approve access/transfer within 14 days upon receipt of the request. - Data access will be given / Data will be transferred after completion of the Data Transfer/Access Agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000037 Transcriptome Analysis

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000050015 fastq.gz 1.8 GB Report
EGAF50000050016 fastq.gz 265.0 MB Report
EGAF50000050017 fastq.gz 299.4 MB Report
EGAF50000050018 fastq.gz 454.8 MB
EGAF50000050019 fastq.gz 3.2 GB Report
EGAF50000050020 fastq.gz 3.1 GB Report
EGAF50000050021 fastq.gz 796.5 MB Report
EGAF50000050022 fastq.gz 1.4 GB Report
EGAF50000050023 fastq.gz 2.9 GB Report
EGAF50000050024 fastq.gz 3.9 GB Report
EGAF50000050025 fastq.gz 1.8 GB Report
EGAF50000050026 fastq.gz 2.2 GB Report
EGAF50000050027 fastq.gz 2.8 GB Report
EGAF50000050028 fastq.gz 5.1 GB Report
EGAF50000050029 fastq.gz 2.1 GB Report
EGAF50000050030 fastq.gz 4.7 GB Report
EGAF50000050031 fastq.gz 2.4 GB Report
EGAF50000050032 fastq.gz 3.1 GB Report
EGAF50000050033 fastq.gz 11.1 GB Report
EGAF50000050034 fastq.gz 10.3 GB Report
EGAF50000050035 fastq.gz 12.0 GB Report
EGAF50000050036 fastq.gz 2.2 GB Report
EGAF50000050037 fastq.gz 1.1 GB Report
EGAF50000050038 fastq.gz 5.3 GB Report
EGAF50000050039 fastq.gz 2.7 GB Report
EGAF50000050040 fastq.gz 11.8 GB Report
EGAF50000050041 fastq.gz 2.9 GB Report
EGAF50000050042 fastq.gz 7.0 GB Report
EGAF50000050043 fastq.gz 1.7 GB Report
EGAF50000050044 fastq.gz 4.0 GB Report
EGAF50000050077 fastq.gz 5.1 GB Report
EGAF50000050078 fastq.gz 532.7 MB Report
EGAF50000050079 fastq.gz 3.3 GB Report
EGAF50000050080 fastq.gz 1.0 GB Report
EGAF50000050081 fastq.gz 1.4 GB Report
EGAF50000050082 fastq.gz 1.9 GB Report
EGAF50000050083 fastq.gz 872.6 MB Report
EGAF50000050084 fastq.gz 973.0 MB Report
EGAF50000050085 fastq.gz 837.5 MB Report
EGAF50000050086 fastq.gz 1.6 GB Report
EGAF50000050087 fastq.gz 2.8 GB Report
EGAF50000050088 fastq.gz 1.9 GB Report
EGAF50000050089 fastq.gz 975.8 MB Report
EGAF50000050090 fastq.gz 2.2 GB Report
EGAF50000050091 fastq.gz 1.4 GB Report
EGAF50000050092 fastq.gz 3.3 GB Report
EGAF50000050093 fastq.gz 597.6 MB Report
EGAF50000050094 fastq.gz 1.4 GB Report
EGAF50000050095 fastq.gz 3.9 GB Report
EGAF50000050096 fastq.gz 432.4 MB Report
EGAF50000050097 fastq.gz 1.0 GB Report
EGAF50000050098 fastq.gz 1.1 GB Report
EGAF50000050099 fastq.gz 2.6 GB Report
EGAF50000050100 fastq.gz 2.0 GB Report
EGAF50000050101 fastq.gz 2.2 GB Report
EGAF50000050102 fastq.gz 5.5 GB Report
EGAF50000050103 fastq.gz 2.4 GB Report
EGAF50000050104 fastq.gz 5.6 GB Report
EGAF50000050105 fastq.gz 8.7 GB Report
EGAF50000050106 fastq.gz 24.4 GB Report
EGAF50000050107 fastq.gz 2.9 GB Report
EGAF50000050108 fastq.gz 6.7 GB Report
EGAF50000050109 fastq.gz 763.0 MB Report
EGAF50000050110 fastq.gz 513.7 MB Report
EGAF50000050111 fastq.gz 3.1 GB Report
EGAF50000050112 fastq.gz 2.2 GB Report
EGAF50000050113 fastq.gz 2.2 GB Report
EGAF50000050114 fastq.gz 2.0 GB Report
EGAF50000050115 fastq.gz 2.0 GB Report
EGAF50000050116 fastq.gz 2.4 GB Report
EGAF50000050117 fastq.gz 2.7 GB Report
EGAF50000050118 fastq.gz 1.5 GB Report
EGAF50000050119 fastq.gz 1.6 GB Report
EGAF50000050120 fastq.gz 3.7 GB Report
EGAF50000050121 fastq.gz 3.5 GB Report
EGAF50000050122 fastq.gz 8.4 GB Report
EGAF50000050123 fastq.gz 1.0 GB Report
EGAF50000050124 fastq.gz 2.4 GB Report
EGAF50000050135 fastq.gz 2.3 GB Report
EGAF50000050137 fastq.gz 697.5 MB Report
EGAF50000050138 fastq.gz 1.6 GB Report
EGAF50000050139 fastq.gz 2.0 GB Report
EGAF50000050140 fastq.gz 689.4 MB Report
EGAF50000050141 fastq.gz 693.8 MB Report
EGAF50000050142 fastq.gz 2.2 GB Report
EGAF50000050143 fastq.gz 1.7 GB Report
EGAF50000050144 fastq.gz 12.6 GB Report
EGAF50000050145 fastq.gz 2.0 GB Report
EGAF50000050146 fastq.gz 3.0 GB Report
EGAF50000050147 fastq.gz 7.7 GB Report
EGAF50000050148 fastq.gz 18.2 GB Report
EGAF50000050149 fastq.gz 3.1 GB Report
EGAF50000050150 fastq.gz 7.3 GB Report
EGAF50000050151 fastq.gz 5.1 GB Report
EGAF50000050152 fastq.gz 1.7 GB Report
EGAF50000050153 fastq.gz 3.6 GB Report
EGAF50000050154 fastq.gz 4.9 GB Report
EGAF50000050155 fastq.gz 2.9 GB Report
EGAF50000050156 fastq.gz 1.8 GB Report
EGAF50000050158 fastq.gz 613.6 MB Report
EGAF50000050159 fastq.gz 2.5 GB Report
EGAF50000050160 fastq.gz 1.2 GB Report
EGAF50000050161 fastq.gz 2.3 GB Report
EGAF50000050162 fastq.gz 2.3 GB Report
EGAF50000050163 fastq.gz 755.3 MB Report
EGAF50000050164 fastq.gz 299.9 MB Report
EGAF50000050165 fastq.gz 920.4 MB Report
EGAF50000050168 fastq.gz 7.3 GB Report
EGAF50000050169 fastq.gz 4.4 GB Report
EGAF50000050170 fastq.gz 2.3 GB Report
EGAF50000050171 fastq.gz 5.6 GB Report
EGAF50000050188 fastq.gz 1.9 GB Report
EGAF50000050189 fastq.gz 2.1 GB Report
EGAF50000050190 fastq.gz 1.5 GB Report
EGAF50000050191 fastq.gz 1.7 GB Report
EGAF50000050192 fastq.gz 2.3 GB Report
EGAF50000050193 fastq.gz 3.3 GB Report
EGAF50000050194 fastq.gz 1.2 GB Report
EGAF50000050195 fastq.gz 1.8 GB Report
EGAF50000050196 fastq.gz 539.0 MB Report
EGAF50000050197 fastq.gz 581.3 MB Report
EGAF50000050198 fastq.gz 1.8 GB Report
EGAF50000050199 fastq.gz 1.3 GB Report
EGAF50000050200 fastq.gz 1.8 GB Report
EGAF50000050201 fastq.gz 544.5 MB Report
EGAF50000050202 fastq.gz 744.4 MB Report
EGAF50000050203 fastq.gz 1.0 GB Report
EGAF50000050204 fastq.gz 1.1 GB Report
EGAF50000050205 fastq.gz 1.6 GB Report
EGAF50000050206 fastq.gz 1.6 GB Report
EGAF50000050207 fastq.gz 1.7 GB Report
EGAF50000050208 fastq.gz 1.5 GB Report
EGAF50000050209 fastq.gz 1.7 GB Report
EGAF50000050210 fastq.gz 1.5 GB Report
EGAF50000050211 fastq.gz 1.7 GB Report
EGAF50000050212 fastq.gz 1.1 GB Report
EGAF50000050213 fastq.gz 992.7 MB Report
EGAF50000050214 fastq.gz 1.4 GB Report
EGAF50000050215 fastq.gz 2.0 GB Report
EGAF50000050216 fastq.gz 1.3 GB Report
EGAF50000050217 fastq.gz 2.0 GB Report
EGAF50000050218 fastq.gz 1.3 GB Report
EGAF50000050219 fastq.gz 1.9 GB Report
EGAF50000050220 fastq.gz 735.4 MB Report
EGAF50000050221 fastq.gz 718.7 MB Report
EGAF50000050222 fastq.gz 1.2 GB Report
EGAF50000050223 fastq.gz 1.5 GB Report
EGAF50000050224 fastq.gz 777.4 MB Report
EGAF50000050225 fastq.gz 1.2 GB Report
EGAF50000050226 fastq.gz 2.6 GB Report
EGAF50000050227 fastq.gz 4.1 GB Report
EGAF50000050228 fastq.gz 1.7 GB Report
EGAF50000050229 fastq.gz 1.5 GB Report
EGAF50000050230 fastq.gz 2.3 GB Report
EGAF50000050231 fastq.gz 1.0 GB Report
EGAF50000050232 fastq.gz 1.6 GB Report
EGAF50000050233 fastq.gz 1.7 GB Report
EGAF50000050234 fastq.gz 2.0 GB Report
EGAF50000050235 fastq.gz 1.1 GB Report
EGAF50000050236 fastq.gz 1.3 GB Report
EGAF50000050237 fastq.gz 2.7 GB Report
EGAF50000050238 fastq.gz 3.4 GB Report
EGAF50000050239 fastq.gz 2.0 GB Report
EGAF50000050240 fastq.gz 2.5 GB Report
EGAF50000050241 fastq.gz 921.0 MB Report
EGAF50000050242 fastq.gz 1.3 GB Report
EGAF50000050243 fastq.gz 1.7 GB Report
EGAF50000050244 fastq.gz 2.3 GB Report
EGAF50000050245 fastq.gz 656.3 MB Report
EGAF50000050246 fastq.gz 819.4 MB Report
EGAF50000050247 fastq.gz 954.6 MB Report
EGAF50000050248 fastq.gz 1.2 GB Report
EGAF50000050249 fastq.gz 502.5 MB Report
EGAF50000050250 fastq.gz 621.4 MB Report
EGAF50000050251 fastq.gz 1.7 GB Report
EGAF50000050252 fastq.gz 2.3 GB Report
EGAF50000050253 fastq.gz 619.4 MB Report
EGAF50000050254 fastq.gz 748.8 MB Report
EGAF50000050255 fastq.gz 2.6 GB Report
EGAF50000050256 fastq.gz 557.8 MB Report
EGAF50000050257 fastq.gz 701.1 MB Report
EGAF50000050258 fastq.gz 826.2 MB Report
EGAF50000050259 fastq.gz 1.8 GB Report
EGAF50000050260 fastq.gz 765.8 MB Report
EGAF50000050261 fastq.gz 1.8 GB Report
EGAF50000050262 fastq.gz 956.4 MB Report
EGAF50000050263 fastq.gz 2.1 GB Report
EGAF50000050264 fastq.gz 322.4 MB Report
EGAF50000050265 fastq.gz 764.5 MB Report
EGAF50000050266 fastq.gz 384.3 MB Report
EGAF50000050267 fastq.gz 873.1 MB Report
EGAF50000050268 fastq.gz 255.1 MB Report
EGAF50000050269 fastq.gz 570.3 MB Report
EGAF50000050270 fastq.gz 2.8 GB Report
EGAF50000050271 fastq.gz 824.4 MB Report
EGAF50000050272 fastq.gz 683.3 MB Report
EGAF50000050273 fastq.gz 705.4 MB Report
EGAF50000050274 fastq.gz 2.3 GB Report
EGAF50000050275 fastq.gz 2.3 GB Report
EGAF50000050276 fastq.gz 817.3 MB Report
EGAF50000050277 fastq.gz 835.9 MB Report
EGAF50000050278 fastq.gz 2.0 GB Report
EGAF50000050279 fastq.gz 711.7 MB Report
EGAF50000050280 fastq.gz 736.4 MB Report
EGAF50000050281 fastq.gz 776.1 MB Report
EGAF50000050282 fastq.gz 791.3 MB Report
EGAF50000050283 fastq.gz 1.5 GB Report
EGAF50000050284 fastq.gz 1.5 GB Report
EGAF50000050285 fastq.gz 692.4 MB Report
EGAF50000050286 fastq.gz 1.1 GB Report
EGAF50000050287 fastq.gz 1.1 GB Report
EGAF50000050288 fastq.gz 1.1 GB Report
EGAF50000050289 fastq.gz 1.1 GB Report
EGAF50000050290 fastq.gz 1.2 GB Report
EGAF50000050291 fastq.gz 1.2 GB Report
EGAF50000050292 fastq.gz 958.7 MB Report
EGAF50000050293 fastq.gz 970.5 MB Report
EGAF50000050294 fastq.gz 1.1 GB
EGAF50000050295 fastq.gz 1.1 GB Report
EGAF50000050296 fastq.gz 1.1 GB Report
EGAF50000050297 fastq.gz 1.1 GB Report
EGAF50000050298 fastq.gz 2.7 GB Report
EGAF50000050299 fastq.gz 2.6 GB Report
EGAF50000050300 fastq.gz 1.7 GB Report
EGAF50000050301 fastq.gz 1.6 GB Report
EGAF50000050302 fastq.gz 3.2 GB Report
EGAF50000050303 fastq.gz 2.0 GB Report
EGAF50000050304 fastq.gz 4.2 GB Report
EGAF50000050305 fastq.gz 5.3 GB Report
EGAF50000050306 fastq.gz 4.7 GB Report
EGAF50000050307 fastq.gz 5.9 GB Report
EGAF50000050308 fastq.gz 2.0 GB Report
EGAF50000050309 fastq.gz 1.9 GB Report
EGAF50000050310 fastq.gz 879.4 MB Report
EGAF50000050311 fastq.gz 1.0 GB Report
EGAF50000050312 fastq.gz 3.0 GB Report
EGAF50000050313 fastq.gz 2.0 GB Report
EGAF50000050314 fastq.gz 2.2 GB Report
EGAF50000050315 fastq.gz 1.2 GB Report
EGAF50000050316 fastq.gz 1.4 GB Report
EGAF50000050317 fastq.gz 6.7 GB Report
EGAF50000050318 fastq.gz 8.3 GB Report
EGAF50000050319 fastq.gz 1.7 GB Report
EGAF50000050320 fastq.gz 2.0 GB Report
EGAF50000050321 fastq.gz 4.7 GB Report
EGAF50000050322 fastq.gz 1.0 GB Report
EGAF50000050323 fastq.gz 1.3 GB Report
EGAF50000050324 fastq.gz 606.5 MB Report
EGAF50000050325 fastq.gz 2.8 GB Report
EGAF50000050326 fastq.gz 6.9 GB Report
EGAF50000050327 fastq.gz 5.2 GB Report
EGAF50000050328 fastq.gz 2.0 GB Report
EGAF50000050329 fastq.gz 4.9 GB Report
EGAF50000050330 fastq.gz 637.6 MB Report
EGAF50000050331 fastq.gz 1.4 GB Report
EGAF50000050332 fastq.gz 2.7 GB Report
EGAF50000050333 fastq.gz 6.5 GB Report
EGAF50000050334 fastq.gz 3.3 GB Report
EGAF50000050335 fastq.gz 8.0 GB Report
EGAF50000050336 fastq.gz 2.6 GB Report
EGAF50000050337 fastq.gz 6.1 GB Report
EGAF50000050338 fastq.gz 1.3 GB Report
EGAF50000050339 fastq.gz 3.0 GB Report
EGAF50000050340 fastq.gz 7.4 GB Report
EGAF50000050341 fastq.gz 2.0 GB Report
EGAF50000050342 fastq.gz 4.9 GB Report
EGAF50000050343 fastq.gz 4.4 GB Report
EGAF50000050344 fastq.gz 526.0 MB Report
EGAF50000050345 fastq.gz 1.0 GB Report
EGAF50000050346 fastq.gz 7.2 GB Report
EGAF50000050347 fastq.gz 2.5 GB Report
EGAF50000050348 fastq.gz 6.1 GB Report
EGAF50000050349 fastq.gz 8.1 GB Report
EGAF50000050350 fastq.gz 19.7 GB Report
EGAF50000050351 fastq.gz 2.2 GB Report
EGAF50000050352 fastq.gz 5.4 GB Report
EGAF50000050353 fastq.gz 5.2 GB Report
EGAF50000050354 fastq.gz 12.8 GB Report
EGAF50000050355 fastq.gz 1.6 GB Report
EGAF50000050356 fastq.gz 3.9 GB Report
EGAF50000050357 fastq.gz 4.5 GB Report
EGAF50000050358 fastq.gz 2.2 GB Report
EGAF50000050359 fastq.gz 5.4 GB Report
EGAF50000050360 fastq.gz 3.4 GB Report
EGAF50000050361 fastq.gz 8.2 GB Report
EGAF50000050362 fastq.gz 888.6 MB Report
EGAF50000050363 fastq.gz 1.9 GB Report
EGAF50000050364 fastq.gz 4.4 GB Report
EGAF50000050365 fastq.gz 1.3 GB Report
EGAF50000050366 fastq.gz 4.2 GB Report
EGAF50000050367 fastq.gz 10.1 GB Report
EGAF50000050368 fastq.gz 1.6 GB Report
EGAF50000050369 fastq.gz 3.7 GB Report
EGAF50000050370 fastq.gz 1.0 GB Report
294 Files (804.2 GB)