VIB CCB Translational Genetics Data Access Commitee

Diether Lambrechts
diether.lambrechts@vib-kuleuven.be

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Dataset ID	Description	Technology	Samples
EGAD00001009723	Dataset containing the FASTQ files of RNA (scr) and TCR (vdj) sequencing of 17 bronchoalveolar lavage fluid samples collected from ICI pneumonitis (n=11) and control (n=6) patients. To comply with GDPR regulations, please note that individual sample identifiers used for this data deposit (alphabetical ID) are different from and cannot be traced back to the patient identifiers used throughout the manuscript (numerical ID).	Illumina NovaSeq 6000	17
EGAD50000000054	We performed 10X Chromium 5' scRNA and scTCR sequencing on 4 on-treatment HNSCC PBMC samples.	Illumina NovaSeq 6000	4
EGAD50000000055	We performed 10X Chromium 3' scRNA sequencing of 23 pre- and on-treatment HNSCC biopsy samples.	Illumina NovaSeq 6000	23
EGAD50000000056	We performed 10X Chromium 5' scRNA (n=50), scTCR (n=48) and scBCR (n=49) sequencing of pre- and on-treatment HNSCC biopsy samples.	Illumina NovaSeq 6000	50