Epigenomic timecourse of brain organoid development
Single-cell Cut&Tag of three histone modifications and chromatin accessibility over a timecourse of brain organoid development from pluripotency. We profiled 5 time points of brain organoid development and 2 time points of retinal organoid development. At each time point used scCut&Tag to profile histone modifications (H3K27me3, H3K27ac, H3K4me3) as well as multiome-seq (10X) to jointly profile transcriptome and chromatin accessibility from the same cell suspension. Library preparation was carried out with the 10x genomics platform.
- 25/06/2024
- 8 samples
- DAC: EGAC50000000103
- Technology: unspecified
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000155 | Epigenetics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF50000064866 | fastq.gz | 934.6 MB | ||
| EGAF50000064867 | fastq.gz | 932.7 MB | ||
| EGAF50000064868 | fastq.gz | 3.0 GB | ||
| EGAF50000064869 | fastq.gz | 283.0 MB | ||
| EGAF50000064870 | fastq.gz | 598.5 MB | ||
| EGAF50000064871 | fastq.gz | 51.8 MB | ||
| EGAF50000064872 | fastq.gz | 109.4 MB | ||
| EGAF50000064873 | fastq.gz | 239.0 MB | ||
| EGAF50000064874 | fastq.gz | 240.2 MB | ||
| EGAF50000064875 | fastq.gz | 50.5 MB | ||
| EGAF50000064876 | fastq.gz | 105.4 MB | ||
| EGAF50000064877 | fastq.gz | 56.9 MB | ||
| EGAF50000064878 | fastq.gz | 57.9 MB | ||
| EGAF50000064879 | fastq.gz | 131.6 MB | ||
| EGAF50000064880 | fastq.gz | 277.3 MB | ||
| EGAF50000064881 | fastq.gz | 279.3 MB | ||
| EGAF50000064882 | fastq.gz | 271.9 MB | ||
| EGAF50000064883 | fastq.gz | 275.1 MB | ||
| EGAF50000064884 | fastq.gz | 3.4 GB | ||
| EGAF50000064885 | fastq.gz | 188.8 MB | ||
| EGAF50000064886 | fastq.gz | 389.6 MB | ||
| EGAF50000064887 | fastq.gz | 787.7 MB | ||
| EGAF50000064888 | fastq.gz | 381.2 MB | ||
| EGAF50000064889 | fastq.gz | 412.0 MB | ||
| EGAF50000064890 | fastq.gz | 927.6 MB | ||
| EGAF50000064891 | fastq.gz | 415.9 MB | ||
| EGAF50000064892 | fastq.gz | 821.1 MB | ||
| EGAF50000064893 | fastq.gz | 1.3 GB | ||
| EGAF50000064894 | fastq.gz | 619.9 MB | ||
| EGAF50000064895 | fastq.gz | 1.3 GB | ||
| EGAF50000064896 | fastq.gz | 1.4 GB | ||
| EGAF50000064901 | fastq.gz | 2.7 GB | ||
| EGAF50000064902 | fastq.gz | 2.9 GB | ||
| EGAF50000064903 | fastq.gz | 29.1 GB | ||
| EGAF50000064907 | fastq.gz | 274.2 MB | ||
| EGAF50000064908 | fastq.gz | 703.6 MB | ||
| EGAF50000064909 | fastq.gz | 675.2 MB | ||
| EGAF50000064910 | fastq.gz | 304.7 MB | ||
| EGAF50000064911 | fastq.gz | 1.4 GB | ||
| EGAF50000064912 | fastq.gz | 680.9 MB | ||
| EGAF50000064913 | fastq.gz | 1.4 GB | ||
| EGAF50000064914 | fastq.gz | 346.3 MB | ||
| EGAF50000064915 | fastq.gz | 1.6 GB | ||
| EGAF50000064916 | fastq.gz | 787.4 MB | ||
| EGAF50000064917 | fastq.gz | 1.7 GB | ||
| EGAF50000064918 | fastq.gz | 286.4 MB | ||
| EGAF50000064919 | fastq.gz | 1.2 GB | ||
| EGAF50000064920 | fastq.gz | 614.5 MB | ||
| EGAF50000064921 | fastq.gz | 1.3 GB | ||
| EGAF50000064922 | fastq.gz | 1.0 GB | ||
| EGAF50000064923 | fastq.gz | 198.7 MB | ||
| EGAF50000064924 | fastq.gz | 1.8 GB | ||
| EGAF50000064925 | fastq.gz | 53.0 MB | ||
| EGAF50000064926 | fastq.gz | 112.4 MB | ||
| EGAF50000064927 | fastq.gz | 247.5 MB | ||
| EGAF50000064928 | fastq.gz | 249.0 MB | ||
| EGAF50000064929 | fastq.gz | 51.6 MB | ||
| EGAF50000064930 | fastq.gz | 107.9 MB | ||
| EGAF50000064931 | fastq.gz | 236.0 MB | ||
| EGAF50000064932 | fastq.gz | 237.7 MB | ||
| EGAF50000064933 | fastq.gz | 201.6 MB | ||
| EGAF50000064934 | fastq.gz | 893.8 MB | ||
| EGAF50000064935 | fastq.gz | 445.3 MB | ||
| EGAF50000064936 | fastq.gz | 895.6 MB | ||
| EGAF50000064937 | fastq.gz | 354.6 MB | ||
| EGAF50000064938 | fastq.gz | 1.6 GB | ||
| EGAF50000064939 | fastq.gz | 770.7 MB | ||
| EGAF50000064940 | fastq.gz | 1.6 GB | ||
| EGAF50000064941 | fastq.gz | 251.3 MB | ||
| EGAF50000064942 | fastq.gz | 1.1 GB | ||
| EGAF50000064943 | fastq.gz | 563.1 MB | ||
| EGAF50000064944 | fastq.gz | 257.1 MB | ||
| EGAF50000064945 | fastq.gz | 1.1 GB | ||
| EGAF50000064946 | fastq.gz | 582.1 MB | ||
| EGAF50000064947 | fastq.gz | 1.2 GB | ||
| EGAF50000064962 | fastq.gz | 52.9 MB | ||
| EGAF50000064963 | fastq.gz | 110.7 MB | ||
| EGAF50000064964 | fastq.gz | 239.6 MB | ||
| EGAF50000064965 | fastq.gz | 242.8 MB | ||
| EGAF50000064966 | fastq.gz | 53.8 MB | ||
| EGAF50000064967 | fastq.gz | 114.4 MB | ||
| EGAF50000064968 | fastq.gz | 252.4 MB | ||
| EGAF50000064969 | fastq.gz | 254.8 MB | ||
| EGAF50000064970 | fastq.gz | 54.0 MB | ||
| EGAF50000064971 | fastq.gz | 113.4 MB | ||
| EGAF50000064972 | fastq.gz | 247.5 MB | ||
| EGAF50000064973 | fastq.gz | 251.1 MB | ||
| EGAF50000064974 | fastq.gz | 564.4 MB | ||
| EGAF50000064975 | fastq.gz | 1.2 GB | ||
| EGAF50000064976 | fastq.gz | 2.5 GB | ||
| EGAF50000064977 | fastq.gz | 2.6 GB | ||
| EGAF50000064978 | fastq.gz | 170.5 MB | ||
| EGAF50000064979 | fastq.gz | 348.7 MB | ||
| EGAF50000064980 | fastq.gz | 748.8 MB | ||
| EGAF50000064981 | fastq.gz | 748.0 MB | ||
| EGAF50000064982 | fastq.gz | 167.6 MB | ||
| EGAF50000064983 | fastq.gz | 340.6 MB | ||
| EGAF50000064984 | fastq.gz | 734.7 MB | ||
| EGAF50000064985 | fastq.gz | 733.7 MB | ||
| EGAF50000064993 | fastq.gz | 1.2 GB | ||
| EGAF50000064994 | fastq.gz | 4.1 GB | ||
| EGAF50000064995 | fastq.gz | 9.6 GB | ||
| EGAF50000064996 | fastq.gz | 68.9 MB | ||
| EGAF50000064997 | fastq.gz | 283.9 MB | ||
| EGAF50000064998 | fastq.gz | 134.7 MB | ||
| EGAF50000064999 | fastq.gz | 290.5 MB | ||
| EGAF50000065000 | fastq.gz | 138.6 MB | ||
| EGAF50000065001 | fastq.gz | 298.7 MB | ||
| EGAF50000065002 | fastq.gz | 257.2 MB | ||
| EGAF50000065003 | fastq.gz | 1.1 GB | ||
| EGAF50000065004 | fastq.gz | 567.9 MB | ||
| EGAF50000065005 | fastq.gz | 1.1 GB | ||
| EGAF50000065006 | fastq.gz | 250.7 MB | ||
| EGAF50000065007 | fastq.gz | 1.1 GB | ||
| EGAF50000065008 | fastq.gz | 549.4 MB | ||
| EGAF50000065009 | fastq.gz | 1.1 GB | ||
| EGAF50000065010 | fastq.gz | 211.4 MB | ||
| EGAF50000065011 | fastq.gz | 953.6 MB | ||
| EGAF50000065012 | fastq.gz | 487.7 MB | ||
| EGAF50000065013 | fastq.gz | 952.0 MB | ||
| EGAF50000065014 | fastq.gz | 207.9 MB | ||
| EGAF50000065015 | fastq.gz | 475.7 MB | ||
| EGAF50000065016 | fastq.gz | 253.9 MB | ||
| EGAF50000065017 | fastq.gz | 1.1 GB | ||
| EGAF50000065018 | fastq.gz | 555.7 MB | ||
| EGAF50000065019 | fastq.gz | 1.1 GB | ||
| EGAF50000065020 | fastq.gz | 248.6 MB | ||
| EGAF50000065021 | fastq.gz | 1.1 GB | ||
| EGAF50000065022 | fastq.gz | 538.9 MB | ||
| EGAF50000065023 | fastq.gz | 1.1 GB | ||
| EGAF50000065024 | fastq.gz | 677.8 MB | ||
| EGAF50000065025 | fastq.gz | 1.5 GB | ||
| EGAF50000065026 | fastq.gz | 3.2 GB | ||
| EGAF50000065027 | fastq.gz | 3.3 GB | ||
| EGAF50000065028 | fastq.gz | 629.6 MB | ||
| EGAF50000065029 | fastq.gz | 1.4 GB | ||
| EGAF50000065030 | fastq.gz | 3.0 GB | ||
| EGAF50000065031 | fastq.gz | 1.3 GB | ||
| EGAF50000065032 | fastq.gz | 315.0 MB | ||
| EGAF50000065033 | fastq.gz | 299.9 MB | ||
| EGAF50000065034 | fastq.gz | 657.9 MB | ||
| EGAF50000065035 | fastq.gz | 1.3 GB | ||
| EGAF50000065036 | fastq.gz | 334.2 MB | ||
| EGAF50000065037 | fastq.gz | 744.6 MB | ||
| EGAF50000065038 | fastq.gz | 722.7 MB | ||
| EGAF50000065039 | fastq.gz | 2.4 GB | ||
| EGAF50000065040 | fastq.gz | 5.6 GB | ||
| EGAF50000065041 | fastq.gz | 52.8 MB | ||
| EGAF50000065042 | fastq.gz | 111.5 MB | ||
| EGAF50000065043 | fastq.gz | 244.1 MB | ||
| EGAF50000065044 | fastq.gz | 246.0 MB | ||
| EGAF50000065045 | fastq.gz | 129.3 MB | ||
| EGAF50000065046 | fastq.gz | 271.8 MB | ||
| EGAF50000065047 | fastq.gz | 272.8 MB | ||
| EGAF50000065048 | fastq.gz | 55.2 MB | ||
| EGAF50000065049 | fastq.gz | 124.2 MB | ||
| EGAF50000065050 | fastq.gz | 259.7 MB | ||
| EGAF50000065051 | fastq.gz | 260.7 MB | ||
| EGAF50000065052 | fastq.gz | 57.8 MB | ||
| EGAF50000065053 | fastq.gz | 130.3 MB | ||
| EGAF50000065054 | fastq.gz | 736.0 MB | ||
| EGAF50000065055 | fastq.gz | 3.4 GB | ||
| EGAF50000065056 | fastq.gz | 1.6 GB | ||
| EGAF50000065057 | fastq.gz | 800.9 MB | ||
| EGAF50000065058 | fastq.gz | 808.0 MB | ||
| EGAF50000065059 | fastq.gz | 186.0 MB | ||
| EGAF50000065060 | fastq.gz | 794.6 MB | ||
| EGAF50000065061 | fastq.gz | 918.0 MB | ||
| EGAF50000065062 | fastq.gz | 207.5 MB | ||
| EGAF50000065063 | fastq.gz | 402.4 MB | ||
| EGAF50000065064 | fastq.gz | 902.0 MB | ||
| EGAF50000065065 | fastq.gz | 1.7 GB | ||
| EGAF50000065066 | fastq.gz | 363.3 MB | ||
| EGAF50000065067 | fastq.gz | 1.7 GB | ||
| EGAF50000065068 | fastq.gz | 827.5 MB | ||
| EGAF50000065069 | fastq.gz | 1.7 GB | ||
| EGAF50000065070 | fastq.gz | 371.7 MB | ||
| EGAF50000065071 | fastq.gz | 1.7 GB | ||
| EGAF50000065072 | fastq.gz | 854.8 MB | ||
| EGAF50000065073 | fastq.gz | 827.5 MB | ||
| EGAF50000065074 | fastq.gz | 190.8 MB | ||
| EGAF50000065075 | fastq.gz | 835.8 MB | ||
| EGAF50000065076 | fastq.gz | 425.3 MB | ||
| EGAF50000065077 | fastq.gz | 812.7 MB | ||
| EGAF50000065078 | fastq.gz | 187.3 MB | ||
| EGAF50000065079 | fastq.gz | 296.1 MB | ||
| EGAF50000065080 | fastq.gz | 1.3 GB | ||
| EGAF50000065081 | fastq.gz | 682.6 MB | ||
| EGAF50000065082 | fastq.gz | 1.4 GB | ||
| EGAF50000065083 | fastq.gz | 304.1 MB | ||
| EGAF50000065084 | fastq.gz | 1.3 GB | ||
| EGAF50000065085 | fastq.gz | 705.9 MB | ||
| EGAF50000065086 | fastq.gz | 1.3 GB | ||
| EGAF50000065087 | fastq.gz | 291.4 MB | ||
| EGAF50000065088 | fastq.gz | 313.6 MB | ||
| EGAF50000065089 | fastq.gz | 1.4 GB | ||
| EGAF50000065090 | fastq.gz | 673.3 MB | ||
| EGAF50000065091 | fastq.gz | 915.1 MB | ||
| EGAF50000065092 | fastq.gz | 212.9 MB | ||
| EGAF50000065093 | fastq.gz | 452.0 MB | ||
| EGAF50000065094 | fastq.gz | 920.9 MB | ||
| EGAF50000065095 | fastq.gz | 1.0 GB | ||
| EGAF50000065096 | fastq.gz | 229.7 MB | ||
| EGAF50000065097 | fastq.gz | 999.6 MB | ||
| EGAF50000065098 | fastq.gz | 493.0 MB | ||
| EGAF50000065099 | fastq.gz | 1.2 GB | ||
| EGAF50000065111 | fastq.gz | 21.3 GB | ||
| EGAF50000065131 | fastq.gz | 3.2 GB | ||
| EGAF50000065132 | fastq.gz | 3.5 GB | ||
| EGAF50000065133 | fastq.gz | 34.9 GB | ||
| EGAF50000065134 | fastq.gz | 25.3 GB | ||
| EGAF50000065138 | fastq.gz | 1.5 GB | ||
| EGAF50000065139 | fastq.gz | 6.9 GB | ||
| EGAF50000065140 | fastq.gz | 3.7 GB | ||
| EGAF50000065141 | fastq.gz | 7.0 GB | ||
| EGAF50000065142 | fastq.gz | 1.5 GB | ||
| EGAF50000065143 | fastq.gz | 6.8 GB | ||
| EGAF50000065144 | fastq.gz | 3.7 GB | ||
| EGAF50000065145 | fastq.gz | 6.9 GB | ||
| EGAF50000065146 | fastq.gz | 1.7 GB | ||
| EGAF50000065147 | fastq.gz | 8.0 GB | ||
| EGAF50000065148 | fastq.gz | 4.4 GB | ||
| EGAF50000065149 | fastq.gz | 8.3 GB | ||
| EGAF50000065150 | fastq.gz | 1.7 GB | ||
| EGAF50000065151 | fastq.gz | 7.9 GB | ||
| EGAF50000065152 | fastq.gz | 4.4 GB | ||
| EGAF50000065153 | fastq.gz | 8.2 GB | ||
| EGAF50000065181 | fastq.gz | 261.2 MB | ||
| EGAF50000065182 | fastq.gz | 1.2 GB | ||
| EGAF50000065183 | fastq.gz | 590.9 MB | ||
| EGAF50000065184 | fastq.gz | 1.3 GB | ||
| EGAF50000065212 | fastq.gz | 60.9 MB | ||
| EGAF50000065213 | fastq.gz | 107.4 MB | ||
| EGAF50000065214 | fastq.gz | 384.8 MB | ||
| EGAF50000065215 | fastq.gz | 1.8 GB | ||
| EGAF50000065216 | fastq.gz | 847.5 MB | ||
| EGAF50000065217 | fastq.gz | 1.5 GB | ||
| EGAF50000065218 | fastq.gz | 3.1 GB | ||
| EGAF50000065219 | fastq.gz | 154.9 MB | ||
| EGAF50000065220 | fastq.gz | 279.4 MB | ||
| EGAF50000065221 | fastq.gz | 467.7 MB | ||
| EGAF50000065222 | fastq.gz | 1.0 GB | ||
| EGAF50000065223 | fastq.gz | 1.0 GB | ||
| EGAF50000065224 | fastq.gz | 877.3 MB | ||
| EGAF50000065225 | fastq.gz | 435.1 MB | ||
| EGAF50000065226 | fastq.gz | 878.7 MB | ||
| EGAF50000065227 | fastq.gz | 1.1 GB | ||
| EGAF50000065229 | fastq.gz | 223.5 MB | ||
| EGAF50000065230 | fastq.gz | 454.7 MB | ||
| EGAF50000065231 | fastq.gz | 1.0 GB | ||
| EGAF50000065235 | fastq.gz | 228.5 MB | ||
| EGAF50000065236 | fastq.gz | 229.9 MB | ||
| EGAF50000065241 | fastq.gz | 651.8 MB | ||
| EGAF50000065242 | fastq.gz | 3.1 GB | ||
| EGAF50000065243 | fastq.gz | 256.3 MB | ||
| EGAF50000065244 | fastq.gz | 260.4 MB | ||
| EGAF50000065261 | fastq.gz | 228.4 MB | ||
| EGAF50000065262 | fastq.gz | 61.9 MB | ||
| EGAF50000065263 | fastq.gz | 110.3 MB | ||
| EGAF50000065264 | fastq.gz | 260.9 MB | ||
| EGAF50000065265 | fastq.gz | 265.3 MB | ||
| EGAF50000065266 | fastq.gz | 304.6 MB | ||
| EGAF50000065267 | fastq.gz | 1.3 GB | ||
| EGAF50000065268 | fastq.gz | 657.9 MB | ||
| EGAF50000065269 | fastq.gz | 1.3 GB | ||
| EGAF50000065270 | fastq.gz | 1.2 GB | ||
| EGAF50000065271 | fastq.gz | 4.1 GB | ||
| EGAF50000065272 | fastq.gz | 9.7 GB | ||
| EGAF50000065273 | fastq.gz | 720.2 MB | ||
| EGAF50000065274 | fastq.gz | 2.4 GB | ||
| EGAF50000065275 | fastq.gz | 5.7 GB | ||
| EGAF50000065282 | fastq.gz | 291.6 MB | ||
| EGAF50000065283 | fastq.gz | 70.3 MB | ||
| EGAF50000065284 | fastq.gz | 211.0 MB | ||
| EGAF50000065285 | fastq.gz | 153.3 MB | ||
| EGAF50000065286 | fastq.gz | 711.2 MB | ||
| EGAF50000065287 | fastq.gz | 682.6 MB | ||
| EGAF50000065289 | fastq.gz | 1.3 GB | ||
| EGAF50000065290 | fastq.gz | 678.1 MB | ||
| EGAF50000065291 | fastq.gz | 1.4 GB | ||
| EGAF50000065292 | fastq.gz | 1.5 GB | ||
| EGAF50000065293 | fastq.gz | 1.4 GB | ||
| EGAF50000065294 | fastq.gz | 1.5 GB | ||
| EGAF50000065295 | fastq.gz | 1.6 GB | ||
| 284 Files (432.2 GB) | ||||