About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Profiling of gene expression and epigenomics in the fetal brain

scRNA-seq and Cut&Tag from a sample of the human fetal brain. To compare neurogenesis in the primary human brain with that in organoids, we profiled transcriptome and chromatin accessibility (10X multiome) as well as bulk Cut&Tag of histone modifications H3K27me3, H3K27ac and H3K4me3. We used a human brain sample from GW 19 for all experiments.

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000155 Epigenetics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000064897 fastq.gz 5.7 GB Report
EGAF50000064898 fastq.gz 6.0 GB Report
EGAF50000064899 fastq.gz 1.0 GB Report
EGAF50000064900 fastq.gz 2.8 GB Report
EGAF50000065100 fastq.gz 1.1 GB Report
EGAF50000065101 fastq.gz 3.2 GB Report
EGAF50000065102 fastq.gz 5.7 GB Report
EGAF50000065103 fastq.gz 6.1 GB Report
EGAF50000065104 fastq.gz 1.1 GB Report
EGAF50000065105 fastq.gz 3.1 GB Report
EGAF50000065106 fastq.gz 5.0 GB Report
EGAF50000065107 fastq.gz 5.2 GB Report
EGAF50000065108 fastq.gz 2.8 GB Report
EGAF50000065109 fastq.gz 5.1 GB Report
EGAF50000065110 fastq.gz 5.3 GB Report
EGAF50000065154 fastq.gz 590.9 MB Report
EGAF50000065155 fastq.gz 5.1 GB Report
EGAF50000065156 fastq.gz 522.9 MB Report
EGAF50000065157 fastq.gz 592.1 MB Report
EGAF50000065158 fastq.gz 2.1 GB Report
EGAF50000065159 fastq.gz 682.5 MB Report
EGAF50000065160 fastq.gz 2.6 GB Report
EGAF50000065161 fastq.gz 6.3 GB Report
EGAF50000065162 fastq.gz 96.0 MB Report
EGAF50000065163 fastq.gz 113.6 MB Report
EGAF50000065164 fastq.gz 644.4 MB Report
EGAF50000065165 fastq.gz 691.1 MB Report
EGAF50000065166 fastq.gz 2.6 GB Report
EGAF50000065167 fastq.gz 6.4 GB Report
EGAF50000065168 fastq.gz 66.3 MB Report
EGAF50000065169 fastq.gz 78.3 MB Report
EGAF50000065170 fastq.gz 83.5 MB Report
EGAF50000065171 fastq.gz 90.0 MB Report
EGAF50000065210 fastq.gz 632.8 MB Report
EGAF50000065211 fastq.gz 5.2 GB Report
EGAF50000065237 fastq.gz 1.0 GB Report
EGAF50000065238 fastq.gz 515.9 MB Report
EGAF50000065239 fastq.gz 2.1 GB Report
38 Files (98.0 GB)