Visium Spatial tramscriptomics data set
This data set contains raw FASTQ files and processed files of spatial transcriptomics of 6 EMD samples collected from MM patients. The processed files contains the h5 expression matrices, Image of the Visium slide, and TSV of spatial coordinates. Patients whom are included in this data set are PT01A, PT01B, PT02, PT03, PT07, and PT08.
- 17/09/2024
- 8 samples
- DAC: EGAC50000000173
- Technology: NextSeq 2000
- PUB DUO:0000019 (version: 2021-02-23)publication requiredThis data use modifier indicates that requestor agrees to make results of studies using the data available to the larger scientific community.
- US DUO:0000026 (version: 2021-02-23)user specific restrictionThis data use modifier indicates that use is limited to use by approved users.
- GRU DUO:0000042 (version: 2021-02-23)general research useThis data use permission indicates that use is allowed for general research use for any research purpose.
MSNZ AGRasche AG Riedel Data Access Policy
Access to the generated data is made available upon completion of the data access agreement, which is subject to review by the data access committee and exclusive granting to qualified investigators for appropriate utilization.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000227 | RNASeq |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Located in | |
|---|---|---|---|---|
| EGAF50000088678 | fq.gz | 241.9 MB | ||
| EGAF50000088679 | fq.gz | 496.9 MB | ||
| EGAF50000088680 | fq.gz | 371.2 MB | ||
| EGAF50000088681 | fq.gz | 779.7 MB | ||
| EGAF50000088682 | fastq | 41.7 GB | ||
| EGAF50000088683 | fastq | 49.8 GB | ||
| EGAF50000088684 | fastq | 26.6 GB | ||
| EGAF50000088685 | fastq | 22.3 GB | ||
| EGAF50000088686 | fq.gz | 1.6 GB | ||
| EGAF50000088687 | fq.gz | 3.2 GB | ||
| EGAF50000088688 | fastq.gz | 605.8 MB | ||
| EGAF50000088689 | fastq.gz | 1.3 GB | ||
| EGAF50000088694 | fastq.gz | 3.3 GB | ||
| EGAF50000088695 | fastq.gz | 1.5 GB | ||
| EGAF50000088696 | rar | 18.9 MB | ||
| EGAF50000088697 | rar | 17.6 MB | ||
| EGAF50000088700 | rar | 11.3 MB | ||
| EGAF50000088701 | rar | 7.1 MB | ||
| EGAF50000088702 | rar | 7.6 MB | ||
| 19 Files (153.8 GB) | ||||