RNA-seq of whole blood and PBMC samples from immunotherapy treated NSCLC patients

This dataset contains 228 paired fastq files sequenced with Illumina Novaseq 6000, and the file with the sample and clinical data.

02/05/2024
114 samples
DAC: EGAC00001002939
Technology: Illumina NovaSeq 6000

Access Policy1 Study Files

Metadata

Request Access

VIB Policy for Data Access and Data Transfer

Applicability This policy applies to the access to and transfer of VIB research datasets that contain non-anonymous Personal Data which are subject to the provisions of the General Data Protection Regulation (EU) 2016/679. Access/transfer conditions - The access/transfer is subject to approval by the VIB Data Access Committee. - The proposed research purpose should not be incompatible with the primary research purpose for which the data were originally generated. - The Recipient shall have in place adequate safeguards for the protection of Personal Data. - Access is subject to a Data Transfer/Access Agreement which will be managed by VIB Innovation & Business. - The Data Transfer/Access will be limited to the Data that are necessary for the proposed research. Access/transfer procedure - Requests to access or obtain non-anonymous datasets should be submitted within the EGA portal, which will then generate a notification to the responsible corresponding author that has uploaded the dataset into the repository, and with a copy to dac@vib.be. - VIB will send a request form to the applicant to complete. - The completed form should amongst other request should contain the following information: o Name, affiliation (legal entity) and contact information of the requesting recipient party. o Reference to the specific dataset(s) for which access or transfer is requested. o Description of the research purpose for which the data will be used. - The VIB Data Access Committee takes decisions to approve access/transfer within 14 days upon receipt of the completed request form. - Data access will be given / Data will be transferred after completion of the Data Transfer/Access Agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID	Study Title	Study Type
EGAS50000000266	Non-invasive prediction of immunotherapy response (NIPIT) project	Transcriptome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID	File Type	Size	Quality Report
EGAF50000093275	fastq.gz	884.8 MB	Report
EGAF50000093276	fastq.gz	671.0 MB	Report
EGAF50000093277	fastq.gz	697.9 MB	Report
EGAF50000093278	fastq.gz	845.7 MB	Report
EGAF50000093279	fastq.gz	883.1 MB	Report
EGAF50000093280	fastq.gz	1.2 GB	Report
EGAF50000093281	fastq.gz	964.0 MB	Report
EGAF50000093282	fastq.gz	995.5 MB	Report
EGAF50000093283	fastq.gz	915.6 MB	Report
EGAF50000093284	fastq.gz	959.5 MB	Report
EGAF50000093285	fastq.gz	837.0 MB	Report
EGAF50000093286	fastq.gz	868.2 MB	Report
EGAF50000093287	fastq.gz	942.2 MB	Report
EGAF50000093288	fastq.gz	1.0 GB	Report
EGAF50000093289	fastq.gz	750.3 MB	Report
EGAF50000093290	fastq.gz	1.3 GB	Report
EGAF50000093291	fastq.gz	841.0 MB	Report
EGAF50000093292	fastq.gz	1.1 GB	Report
EGAF50000093293	fastq.gz	1.1 GB	Report
EGAF50000093294	fastq.gz	1.1 GB	Report
EGAF50000093295	fastq.gz	2.1 GB	Report
EGAF50000093296	fastq.gz	750.0 MB	Report
EGAF50000093297	fastq.gz	792.8 MB	Report
EGAF50000093298	fastq.gz	1.1 GB	Report
EGAF50000093299	fastq.gz	1.2 GB	Report
EGAF50000093300	fastq.gz	1.0 GB	Report
EGAF50000093301	fastq.gz	829.9 MB	Report
EGAF50000093302	fastq.gz	1.2 GB	Report
EGAF50000093303	fastq.gz	915.2 MB	Report
EGAF50000093304	fastq.gz	956.2 MB	Report
EGAF50000093305	fastq.gz	1.1 GB	Report
EGAF50000093306	fastq.gz	864.7 MB	Report
EGAF50000093307	fastq.gz	949.0 MB	Report
EGAF50000093308	fastq.gz	674.3 MB	Report
EGAF50000093309	fastq.gz	701.7 MB	Report
EGAF50000093310	fastq.gz	522.7 MB	Report
EGAF50000093311	fastq.gz	679.3 MB	Report
EGAF50000093312	fastq.gz	639.2 MB	Report
EGAF50000093313	fastq.gz	991.8 MB	Report
EGAF50000093314	fastq.gz	828.6 MB	Report
EGAF50000093315	fastq.gz	895.6 MB	Report
EGAF50000093316	fastq.gz	824.7 MB	Report
EGAF50000093317	fastq.gz	832.2 MB	Report
EGAF50000093318	fastq.gz	870.0 MB	Report
EGAF50000093319	fastq.gz	916.5 MB	Report
EGAF50000093320	fastq.gz	1.0 GB	Report
EGAF50000093321	fastq.gz	839.8 MB	Report
EGAF50000093322	fastq.gz	887.6 MB	Report
EGAF50000093323	fastq.gz	950.2 MB	Report
EGAF50000093324	fastq.gz	906.7 MB	Report
EGAF50000093325	fastq.gz	952.8 MB	Report
EGAF50000093326	fastq.gz	700.4 MB	Report
EGAF50000093327	fastq.gz	892.7 MB	Report
EGAF50000093328	fastq.gz	910.1 MB	Report
EGAF50000093329	fastq.gz	681.1 MB	Report
EGAF50000093330	fastq.gz	927.1 MB	Report
EGAF50000093331	fastq.gz	1.1 GB	Report
EGAF50000093332	fastq.gz	1.1 GB	Report
EGAF50000093333	fastq.gz	880.2 MB	Report
EGAF50000093334	fastq.gz	932.4 MB	Report
EGAF50000093335	fastq.gz	973.4 MB	Report
EGAF50000093336	fastq.gz	1.0 GB	Report
EGAF50000093337	fastq.gz	794.2 MB	Report
EGAF50000093338	fastq.gz	812.8 MB	Report
EGAF50000093339	fastq.gz	521.0 MB	Report
EGAF50000093340	fastq.gz	922.4 MB	Report
EGAF50000093341	fastq.gz	972.4 MB	Report
EGAF50000093342	fastq.gz	925.1 MB	Report
EGAF50000093343	fastq.gz	899.6 MB	Report
EGAF50000093344	fastq.gz	902.0 MB	Report
EGAF50000093345	fastq.gz	512.8 MB	Report
EGAF50000093346	fastq.gz	925.4 MB	Report
EGAF50000093347	fastq.gz	884.0 MB	Report
EGAF50000093348	fastq.gz	775.6 MB	Report
EGAF50000093349	fastq.gz	985.9 MB	Report
EGAF50000093350	fastq.gz	2.2 GB	Report
EGAF50000093351	fastq.gz	985.5 MB	Report
EGAF50000093352	fastq.gz	830.4 MB	Report
EGAF50000093353	fastq.gz	808.5 MB	Report
EGAF50000093354	fastq.gz	1.2 GB	Report
EGAF50000093355	fastq.gz	875.3 MB	Report
EGAF50000093356	fastq.gz	871.0 MB	Report
EGAF50000093357	fastq.gz	868.7 MB	Report
EGAF50000093358	fastq.gz	906.8 MB	Report
EGAF50000093359	fastq.gz	848.1 MB	Report
EGAF50000093360	fastq.gz	861.7 MB	Report
EGAF50000093361	fastq.gz	1.0 GB	Report
EGAF50000093362	fastq.gz	648.0 MB	Report
EGAF50000093363	fastq.gz	680.2 MB	Report
EGAF50000093364	fastq.gz	977.4 MB	Report
EGAF50000093365	fastq.gz	996.3 MB	Report
EGAF50000093366	fastq.gz	965.7 MB	Report
EGAF50000093367	fastq.gz	1.0 GB	Report
EGAF50000093368	fastq.gz	833.6 MB	Report
EGAF50000093369	fastq.gz	1.0 GB	Report
EGAF50000093370	fastq.gz	854.3 MB	Report
EGAF50000093371	fastq.gz	882.0 MB	Report
EGAF50000093372	fastq.gz	1.1 GB	Report
EGAF50000093373	fastq.gz	1.2 GB	Report
EGAF50000093374	fastq.gz	787.8 MB	Report
EGAF50000093375	fastq.gz	821.1 MB	Report
EGAF50000093376	fastq.gz	938.0 MB	Report
EGAF50000093377	fastq.gz	1.1 GB	Report
EGAF50000093378	fastq.gz	873.0 MB	Report
EGAF50000093379	fastq.gz	1.1 GB	Report
EGAF50000093380	fastq.gz	886.3 MB	Report
EGAF50000093381	fastq.gz	932.5 MB	Report
EGAF50000093382	fastq.gz	774.2 MB	Report
EGAF50000093383	fastq.gz	829.2 MB	Report
EGAF50000093384	fastq.gz	950.4 MB	Report
EGAF50000093385	fastq.gz	1.0 GB	Report
EGAF50000093386	fastq.gz	1.1 GB	Report
EGAF50000093387	fastq.gz	679.5 MB	Report
EGAF50000093388	fastq.gz	729.0 MB	Report
EGAF50000093389	fastq.gz	911.9 MB	Report
EGAF50000093390	fastq.gz	908.2 MB	Report
EGAF50000093391	fastq.gz	918.7 MB	Report
EGAF50000093392	fastq.gz	889.6 MB	Report
EGAF50000093393	fastq.gz	679.9 MB	Report
EGAF50000093394	fastq.gz	734.4 MB	Report
EGAF50000093395	fastq.gz	1.2 GB	Report
EGAF50000093396	fastq.gz	1.3 GB	Report
EGAF50000093397	fastq.gz	561.5 MB	Report
EGAF50000093398	fastq.gz	707.3 MB	Report
EGAF50000093399	fastq.gz	735.0 MB	Report
EGAF50000093400	fastq.gz	946.1 MB	Report
EGAF50000093401	fastq.gz	905.1 MB	Report
EGAF50000093402	fastq.gz	489.4 MB	Report
EGAF50000093403	fastq.gz	520.6 MB	Report
EGAF50000093404	fastq.gz	709.8 MB	Report
EGAF50000093405	fastq.gz	1.0 GB	Report
EGAF50000093406	fastq.gz	1.1 GB	Report
EGAF50000093407	fastq.gz	933.4 MB	Report
EGAF50000093408	fastq.gz	999.9 MB	Report
EGAF50000093409	fastq.gz	310.6 MB	Report
EGAF50000093410	fastq.gz	328.4 MB	Report
EGAF50000093411	fastq.gz	871.9 MB	Report
EGAF50000093412	fastq.gz	955.2 MB	Report
EGAF50000093413	fastq.gz	1.0 GB	Report
EGAF50000093414	fastq.gz	1.0 GB	Report
EGAF50000093415	fastq.gz	871.0 MB	Report
EGAF50000093416	fastq.gz	614.5 MB	Report
EGAF50000093417	fastq.gz	654.3 MB	Report
EGAF50000093418	fastq.gz	817.7 MB	Report
EGAF50000093419	fastq.gz	653.7 MB	Report
EGAF50000093420	fastq.gz	684.0 MB	Report
EGAF50000093421	fastq.gz	967.8 MB	Report
EGAF50000093422	fastq.gz	717.4 MB	Report
EGAF50000093423	fastq.gz	767.0 MB	Report
EGAF50000093424	fastq.gz	1.1 GB	Report
EGAF50000093425	fastq.gz	1.1 GB	Report
EGAF50000093426	fastq.gz	1.0 GB	Report
EGAF50000093427	fastq.gz	1.1 GB	Report
EGAF50000093428	fastq.gz	688.8 MB	Report
EGAF50000093429	fastq.gz	733.7 MB	Report
EGAF50000093430	fastq.gz	1.1 GB	Report
EGAF50000093431	fastq.gz	929.6 MB	Report
EGAF50000093432	fastq.gz	930.9 MB	Report
EGAF50000093433	fastq.gz	963.6 MB	Report
EGAF50000093434	fastq.gz	1.0 GB	Report
EGAF50000093435	fastq.gz	834.6 MB	Report
EGAF50000093436	fastq.gz	976.1 MB	Report
EGAF50000093437	fastq.gz	764.7 MB	Report
EGAF50000093438	fastq.gz	788.0 MB	Report
EGAF50000093439	fastq.gz	841.1 MB	Report
EGAF50000093440	fastq.gz	878.3 MB	Report
EGAF50000093441	fastq.gz	791.1 MB	Report
EGAF50000093442	fastq.gz	899.7 MB	Report
EGAF50000093443	fastq.gz	1.2 GB	Report
EGAF50000093444	fastq.gz	828.8 MB	Report
EGAF50000093445	fastq.gz	958.9 MB	Report
EGAF50000093446	fastq.gz	990.4 MB	Report
EGAF50000093447	fastq.gz	929.6 MB	Report
EGAF50000093448	fastq.gz	918.9 MB	Report
EGAF50000093449	fastq.gz	764.2 MB	Report
EGAF50000093450	fastq.gz	897.4 MB	Report
EGAF50000093451	fastq.gz	946.5 MB	Report
EGAF50000093452	fastq.gz	893.3 MB	Report
EGAF50000093453	fastq.gz	836.7 MB	Report
EGAF50000093454	fastq.gz	932.2 MB	Report
EGAF50000093455	fastq.gz	915.5 MB	Report
EGAF50000093456	fastq.gz	1.3 GB	Report
EGAF50000093457	fastq.gz	970.4 MB	Report
EGAF50000093458	fastq.gz	1.0 GB	Report
EGAF50000093459	fastq.gz	983.1 MB	Report
EGAF50000093460	fastq.gz	1.0 GB	Report
EGAF50000093461	fastq.gz	998.1 MB	Report
EGAF50000093462	fastq.gz	1.0 GB	Report
EGAF50000093463	fastq.gz	933.3 MB	Report
EGAF50000093464	fastq.gz	984.4 MB	Report
EGAF50000093465	fastq.gz	831.1 MB	Report
EGAF50000093466	fastq.gz	1.2 GB	Report
EGAF50000093467	fastq.gz	723.4 MB	Report
EGAF50000093468	fastq.gz	1.1 GB	Report
EGAF50000093469	fastq.gz	663.4 MB	Report
EGAF50000093470	fastq.gz	969.5 MB	Report
EGAF50000093471	fastq.gz	704.8 MB	Report
EGAF50000093472	fastq.gz	878.6 MB	Report
EGAF50000093473	fastq.gz	838.1 MB	Report
EGAF50000093474	fastq.gz	740.7 MB	Report
EGAF50000093475	fastq.gz	773.2 MB	Report
EGAF50000093476	fastq.gz	966.3 MB	Report
EGAF50000093477	fastq.gz	882.4 MB	Report
EGAF50000093478	fastq.gz	956.4 MB	Report
EGAF50000093479	fastq.gz	964.9 MB	Report
EGAF50000093480	fastq.gz	903.2 MB	Report
EGAF50000093481	fastq.gz	936.9 MB	Report
EGAF50000093482	fastq.gz	3.0 GB	Report
EGAF50000093483	fastq.gz	3.1 GB	Report
EGAF50000093484	fastq.gz	844.1 MB	Report
EGAF50000093485	fastq.gz	764.6 MB	Report
EGAF50000093486	fastq.gz	1.0 GB	Report
EGAF50000093487	fastq.gz	886.7 MB	Report
EGAF50000093488	fastq.gz	920.3 MB	Report
EGAF50000093489	fastq.gz	693.0 MB	Report
EGAF50000093490	fastq.gz	851.2 MB	Report
EGAF50000093491	fastq.gz	907.3 MB	Report
EGAF50000093492	fastq.gz	972.2 MB	Report
EGAF50000093493	fastq.gz	1.2 GB	Report
EGAF50000093494	fastq.gz	1.0 GB	Report
EGAF50000093495	fastq.gz	1.1 GB	Report
EGAF50000093496	fastq.gz	884.4 MB	Report
EGAF50000093497	fastq.gz	1.1 GB	Report
EGAF50000093498	fastq.gz	862.2 MB	Report
EGAF50000093499	fastq.gz	861.8 MB	Report
EGAF50000093500	fastq.gz	1.1 GB	Report
EGAF50000093501	fastq.gz	535.3 MB	Report
EGAF50000093502	fastq.gz	947.2 MB	Report
EGAF50000093503	xlsx	29.5 kB
229 Files (211.0 GB)