About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Targeted DNA sequencing and mRNA sequencing data from patients with peritoneal metastasis from colorectal cancer

Patients with peritoneal metastasis from colorectal cancer (PM-CRC) have inferior prognosis and respond particularly poorly to chemotherapy. This study aims to identify the molecular explanation for the observed clinical behavior and suggest novel treatment strategies in PM-CRC. Tumor samples (230) from a Norwegian national cohort undergoing surgery and hyperthermic intraperitoneal chemotherapy (HIPEC) with mitomycin C (MMC) for PM-CRC were subjected to targeted DNA sequencing, and associations with clinical data were analyzed. mRNA sequencing was conducted on a subset of 30 samples to compare gene expression in tumors harboring BRAF or KRAS mutations and wild-type tumors.

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Oslo University Hospital Data Access Policy

Oslo University Hospital DAC Guide This guide document attempts at providing a generic overview of General Data Protection Regulation (GDPR)-related concepts that you as a Data Access Committee (DAC) member to a dataset in FEGA Norway need to be aware of in relation to function/policies in your own institution and the GDPR. Reviewing requests for data access to a dataset submitted in FEGA Norway A researcher initiates contact with the DAC main contact person for your dataset Negotiate a Data Access Agreement (DAA) Often in the form of a Data Transfer Agreement, where the requester takes on an independent Data Controller responsibility. Other alternatives are specific Data Processing Agreements or joint Data Controller Agreement, but these require detailed clarifications and regulations up front. FEGA Norway has developed a generic Data Access Agreement of different types: DTA-based template DPA-based template In the event of an approved data access request after a signed DAA, your institution would normally require you to file a notification about The signed DAA and a copy of it Additional considerations regarding the processing of the request, including the requestors ability to secure the data and processing in compliance with the regulations of the dataset. This should be filed through standard mechanisms for notification on projects containing sensitive data in your organisation. Contactfega-norway-support@elixir.no

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000404 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000133347 bai 1.8 MB
EGAF50000133348 bai 1.7 MB
EGAF50000133349 bam 559.3 MB
EGAF50000133350 bam 757.6 MB
EGAF50000133351 bai 1.6 MB
EGAF50000133352 bam 496.1 MB
EGAF50000133353 bai 1.7 MB
EGAF50000133354 bai 2.1 MB
EGAF50000133355 bam 418.1 MB
EGAF50000133356 bai 1.7 MB
EGAF50000133357 bam 712.5 MB
EGAF50000133358 bai 1.8 MB
EGAF50000133359 bam 495.7 MB
EGAF50000133360 bai 1.7 MB
EGAF50000133361 bam 202.0 MB
EGAF50000133362 bai 1.7 MB
EGAF50000133363 bam 392.2 MB
EGAF50000133364 bai 1.8 MB
EGAF50000133365 bam 181.6 MB
EGAF50000133366 bai 2.2 MB
EGAF50000133367 bam 357.0 MB
EGAF50000133368 bai 1.8 MB
EGAF50000133369 bam 592.1 MB
EGAF50000133370 bam 318.6 MB
EGAF50000133371 bai 2.6 MB
EGAF50000133372 bai 1.7 MB
EGAF50000133373 bam 244.7 MB
EGAF50000133374 bai 2.6 MB
EGAF50000133375 bam 1.8 GB
EGAF50000133376 bai 1.0 MB
EGAF50000133377 bam 73.8 kB
EGAF50000133378 bam 2.2 GB
EGAF50000133379 bai 2.0 MB
EGAF50000133380 bam 755.5 MB
EGAF50000133381 bai 1.7 MB
EGAF50000133382 bam 193.1 MB
EGAF50000133383 bai 2.2 MB
EGAF50000133384 bam 821.5 MB
EGAF50000133385 bai 1.7 MB
EGAF50000133386 bai 3.0 MB
EGAF50000133387 bam 361.3 MB
EGAF50000133388 bam 3.5 GB
EGAF50000133389 bai 1.6 MB
EGAF50000133390 bam 231.1 MB
EGAF50000133391 bai 1.6 MB
EGAF50000133392 bam 429.7 MB
EGAF50000133393 bai 1.6 MB
EGAF50000133394 bam 348.2 MB
EGAF50000133395 bai 3.1 MB
EGAF50000133396 bam 3.3 GB
EGAF50000133397 bai 1.6 MB
EGAF50000133398 bai 1.6 MB
EGAF50000133399 bam 137.7 MB
EGAF50000133400 bam 290.3 MB
EGAF50000133401 bai 1.5 MB
EGAF50000133402 bam 21.4 MB
EGAF50000133403 bai 1.1 MB
EGAF50000133404 bam 99.5 kB
EGAF50000133405 bai 1.6 MB
EGAF50000133406 bam 179.6 MB
EGAF50000133407 bai 1.6 MB
EGAF50000133408 bam 207.4 MB
EGAF50000133409 bai 1.6 MB
EGAF50000133410 bam 167.5 MB
EGAF50000133411 bai 1.6 MB
EGAF50000133412 bam 130.4 MB
EGAF50000133413 bai 1.6 MB
EGAF50000133414 bam 304.6 MB
EGAF50000133415 bai 1.7 MB
EGAF50000133416 bam 321.0 MB
EGAF50000133417 bai 1.6 MB
EGAF50000133418 bai 3.2 MB
EGAF50000133419 bam 310.3 MB
EGAF50000133420 bam 3.2 GB
EGAF50000133421 bai 1.8 MB
EGAF50000133422 bam 288.3 MB
EGAF50000133423 bai 2.9 MB
EGAF50000133424 bam 2.9 GB
EGAF50000133425 bai 2.8 MB
EGAF50000133426 bai 1.7 MB
EGAF50000133427 bam 497.8 MB
EGAF50000133428 bai 3.0 MB
EGAF50000133429 bam 3.8 GB
EGAF50000133430 bam 3.8 GB
EGAF50000133431 bai 1.6 MB
EGAF50000133432 bam 294.8 MB
EGAF50000133433 bai 2.6 MB
EGAF50000133434 bai 1.6 MB
EGAF50000133435 bam 3.3 GB
EGAF50000133436 bam 203.0 MB
EGAF50000133437 bai 2.5 MB
EGAF50000133438 bam 3.6 GB
EGAF50000133439 bai 2.2 MB
EGAF50000133440 bam 1.4 GB
EGAF50000133441 bai 1.6 MB
EGAF50000133442 bam 181.4 MB
EGAF50000133443 bai 2.4 MB
EGAF50000133444 bai 2.3 MB
EGAF50000133445 bam 3.1 GB
EGAF50000133446 bai 1.5 MB
EGAF50000133447 bam 128.1 MB
EGAF50000133448 bam 3.2 GB
EGAF50000133449 bai 1.7 MB
EGAF50000133450 bam 439.6 MB
EGAF50000133451 bai 2.3 MB
EGAF50000133452 bam 2.9 GB
EGAF50000133453 bai 1.5 MB
EGAF50000133454 bam 69.6 MB
EGAF50000133455 bai 1.5 MB
EGAF50000133456 bam 41.8 MB
EGAF50000133457 bai 2.6 MB
EGAF50000133458 bai 1.6 MB
EGAF50000133459 bam 191.8 MB
EGAF50000133460 bai 1.8 MB
EGAF50000133461 bam 444.4 MB
EGAF50000133462 bam 3.6 GB
EGAF50000133463 bai 1.7 MB
EGAF50000133464 bam 831.2 MB
EGAF50000133465 bai 1.6 MB
EGAF50000133466 bam 45.0 MB
EGAF50000133467 bai 1.6 MB
EGAF50000133468 bam 427.5 MB
EGAF50000133469 bai 2.5 MB
EGAF50000133470 bam 3.3 GB
EGAF50000133471 bai 2.0 MB
EGAF50000133472 bam 859.8 MB
EGAF50000133473 bai 1.6 MB
EGAF50000133474 bam 381.7 MB
EGAF50000133475 bai 2.4 MB
EGAF50000133476 bam 2.2 GB
EGAF50000133477 bai 2.5 MB
EGAF50000133478 bam 2.0 GB
EGAF50000133479 bai 2.7 MB
EGAF50000133480 bai 2.0 MB
EGAF50000133481 bam 3.4 GB
EGAF50000133482 bam 1.9 GB
EGAF50000133483 bai 1.8 MB
EGAF50000133484 bam 465.5 MB
EGAF50000133485 bai 2.2 MB
EGAF50000133486 bam 1.6 GB
EGAF50000133487 bai 1.6 MB
EGAF50000133488 bam 108.2 MB
EGAF50000133489 bai 2.1 MB
EGAF50000133490 bai 1.9 MB
EGAF50000133491 bam 730.7 MB
EGAF50000133492 bai 2.0 MB
EGAF50000133493 bam 1.5 GB
EGAF50000133494 bai 2.6 MB
EGAF50000133495 bam 2.0 GB
EGAF50000133496 bam 1.7 GB
EGAF50000133497 bai 2.6 MB
EGAF50000133498 bai 1.8 MB
EGAF50000133499 bam 524.3 MB
EGAF50000133500 bam 3.1 GB
EGAF50000133501 bai 1.7 MB
EGAF50000133502 bam 702.8 MB
EGAF50000133503 bai 1.8 MB
EGAF50000133504 bam 971.4 MB
EGAF50000133505 bai 1.7 MB
EGAF50000133506 bam 399.8 MB
EGAF50000133507 bai 1.9 MB
EGAF50000133508 bam 1.4 GB
EGAF50000133509 bai 2.1 MB
EGAF50000133510 bai 1.9 MB
EGAF50000133511 bam 488.5 MB
EGAF50000133512 bai 1.8 MB
EGAF50000133513 bam 322.1 MB
EGAF50000133514 bai 2.3 MB
EGAF50000133515 bam 1.9 GB
EGAF50000133516 bam 3.1 GB
EGAF50000133517 bai 1.7 MB
EGAF50000133518 bam 339.2 MB
EGAF50000133519 bai 2.7 MB
EGAF50000133520 bai 1.5 MB
EGAF50000133521 bam 396.9 MB
EGAF50000133522 bai 2.2 MB
EGAF50000133523 bam 3.7 GB
EGAF50000133524 bai 3.0 MB
EGAF50000133525 bam 3.0 GB
EGAF50000133526 bai 2.0 MB
EGAF50000133527 bam 741.1 MB
EGAF50000133528 bai 1.9 MB
EGAF50000133529 bam 382.2 MB
EGAF50000133530 bai 2.0 MB
EGAF50000133531 bam 512.3 MB
EGAF50000133532 bai 4.4 MB
EGAF50000133533 bam 3.9 GB
EGAF50000133534 bai 1.8 MB
EGAF50000133535 bam 292.7 MB
EGAF50000133536 bai 1.9 MB
EGAF50000133537 bam 447.5 MB
EGAF50000133538 bam 2.6 GB
EGAF50000133539 bai 1.8 MB
EGAF50000133540 bam 951.3 MB
EGAF50000133541 bam 1.9 GB
EGAF50000133542 bam 2.3 GB
EGAF50000133543 bai 2.6 MB
EGAF50000133544 bai 2.2 MB
EGAF50000133545 bam 3.9 GB
EGAF50000133546 bam 3.5 GB
EGAF50000133547 bai 2.3 MB
EGAF50000133548 bai 2.1 MB
EGAF50000133549 bam 3.1 GB
EGAF50000133550 bam 2.7 GB
EGAF50000133551 bai 2.2 MB
EGAF50000133552 bai 2.3 MB
EGAF50000133553 bam 3.0 GB
EGAF50000133554 bai 2.3 MB
EGAF50000133555 bam 3.2 GB
EGAF50000133556 bam 3.1 GB
EGAF50000133557 bai 2.1 MB
EGAF50000133558 bai 2.6 MB
EGAF50000133559 bam 2.4 GB
EGAF50000133560 bai 2.5 MB
EGAF50000133561 bam 3.2 GB
EGAF50000133562 bam 3.1 GB
EGAF50000133563 bai 1.5 MB
EGAF50000133564 bam 129.6 MB
EGAF50000133565 bai 1.7 MB
EGAF50000133566 bai 2.4 MB
EGAF50000133567 bam 451.6 MB
EGAF50000133568 bam 1.5 GB
EGAF50000133569 bai 2.4 MB
EGAF50000133570 bai 2.2 MB
EGAF50000133571 bam 3.1 GB
EGAF50000133572 bam 3.7 GB
EGAF50000133573 bai 2.4 MB
EGAF50000133574 bai 2.6 MB
EGAF50000133575 bam 3.9 GB
EGAF50000133576 bai 2.5 MB
EGAF50000133577 bam 4.1 GB
EGAF50000133578 bai 1.6 MB
EGAF50000133579 bam 863.2 MB
EGAF50000133580 bam 3.8 GB
EGAF50000133581 bai 2.4 MB
EGAF50000133582 bai 2.6 MB
EGAF50000133583 bam 3.4 GB
EGAF50000133584 bai 2.5 MB
EGAF50000133585 bam 3.8 GB
EGAF50000133586 bai 1.7 MB
EGAF50000133587 bam 3.4 GB
EGAF50000133588 bai 1.7 MB
EGAF50000133589 bam 1.8 GB
EGAF50000133590 bai 2.2 MB
EGAF50000133591 bam 1.6 GB
EGAF50000133592 bai 2.4 MB
EGAF50000133593 bam 1.1 GB
EGAF50000133594 bai 2.1 MB
EGAF50000133595 bam 3.4 GB
EGAF50000133596 bam 2.9 GB
EGAF50000133597 bai 2.3 MB
EGAF50000133598 bai 2.3 MB
EGAF50000133599 bam 3.2 GB
EGAF50000133600 bam 3.4 GB
EGAF50000133601 bai 3.6 MB
EGAF50000133602 bai 2.3 MB
EGAF50000133603 bam 3.5 GB
EGAF50000133604 bam 3.2 GB
EGAF50000133605 bai 2.3 MB
EGAF50000133606 bai 2.7 MB
EGAF50000133607 bam 3.4 GB
EGAF50000133608 bam 2.1 GB
EGAF50000133609 bai 2.3 MB
EGAF50000133610 bai 2.6 MB
EGAF50000133611 bam 3.5 GB
EGAF50000133612 bam 3.5 GB
EGAF50000133613 bai 540.8 kB
EGAF50000133614 bam 66.4 kB
EGAF50000133615 bai 2.4 MB
EGAF50000133616 bam 2.7 GB
EGAF50000133617 bai 2.3 MB
EGAF50000133618 bai 2.4 MB
EGAF50000133619 bam 2.6 GB
EGAF50000133620 bai 1.6 MB
EGAF50000133621 bam 160.0 MB
EGAF50000133622 bam 2.8 GB
EGAF50000133623 bai 1.7 MB
EGAF50000133624 bam 911.3 MB
EGAF50000133625 bai 2.6 MB
EGAF50000133626 bai 2.6 MB
EGAF50000133627 bam 4.2 GB
EGAF50000133628 bam 776.9 MB
EGAF50000133629 bai 2.7 MB
EGAF50000133630 bai 2.7 MB
EGAF50000133631 bam 900.7 MB
EGAF50000133632 bam 4.1 GB
EGAF50000133633 bai 1.6 MB
EGAF50000133634 bam 870.6 MB
EGAF50000133635 bai 1.6 MB
EGAF50000133636 bam 921.6 MB
EGAF50000133637 bai 1.6 MB
EGAF50000133638 bam 860.7 MB
EGAF50000133639 bai 1.6 MB
EGAF50000133640 bam 299.2 MB
EGAF50000133641 bai 1.6 MB
EGAF50000133642 bai 2.2 MB
EGAF50000133643 bam 3.5 GB
EGAF50000133644 bam 256.6 MB
EGAF50000133645 bai 1.6 MB
EGAF50000133646 bam 338.0 MB
EGAF50000133647 bai 2.3 MB
EGAF50000133648 bam 3.7 GB
EGAF50000133649 bai 1.7 MB
EGAF50000133650 bai 2.4 MB
EGAF50000133651 bam 128.5 MB
EGAF50000133652 bam 3.9 GB
EGAF50000133653 bai 1.6 MB
EGAF50000133654 bam 211.2 MB
EGAF50000133655 bai 1.7 MB
EGAF50000133656 bam 509.3 MB
EGAF50000133657 bai 1.6 MB
EGAF50000133658 bai 1.9 MB
EGAF50000133659 bam 566.8 MB
EGAF50000133660 bam 167.0 MB
EGAF50000133661 bai 1.8 MB
EGAF50000133662 bai 1.7 MB
EGAF50000133663 bam 384.8 MB
EGAF50000133664 bai 1.6 MB
EGAF50000133665 bam 360.5 MB
EGAF50000133666 bai 1.5 MB
EGAF50000133667 bam 68.9 MB
EGAF50000133668 bai 1.6 MB
EGAF50000133669 bam 211.7 MB
EGAF50000133670 bam 265.0 MB
EGAF50000133671 bai 1.6 MB
EGAF50000133672 bam 121.7 MB
EGAF50000133673 bai 1.6 MB
EGAF50000133674 bam 72.9 MB
EGAF50000133675 bai 1.7 MB
EGAF50000133676 bam 140.2 MB
EGAF50000133677 bai 1.7 MB
EGAF50000133678 bai 1.6 MB
EGAF50000133679 bam 166.4 MB
EGAF50000133680 bam 368.6 MB
EGAF50000133681 bai 1.6 MB
EGAF50000133682 bai 1.8 MB
EGAF50000133683 bam 416.7 MB
EGAF50000133684 bai 1.6 MB
EGAF50000133685 bam 398.6 MB
EGAF50000133686 bai 1.7 MB
EGAF50000133687 bam 405.7 MB
EGAF50000133688 bai 1.7 MB
EGAF50000133689 bam 400.2 MB
EGAF50000133690 bai 1.7 MB
EGAF50000133691 bam 100.3 MB
EGAF50000133692 bai 1.6 MB
EGAF50000133693 bam 205.4 MB
EGAF50000133694 bai 1.7 MB
EGAF50000133695 bam 194.1 MB
EGAF50000133696 bai 2.8 MB
EGAF50000133697 bam 338.3 MB
EGAF50000133698 bai 1.6 MB
EGAF50000133699 bam 431.4 MB
EGAF50000133700 bai 3.1 MB
EGAF50000133701 bam 3.0 GB
EGAF50000133702 bam 3.3 GB
EGAF50000133703 bai 1.7 MB
EGAF50000133704 bam 219.2 MB
EGAF50000133705 bai 1.7 MB
EGAF50000133706 bam 248.6 MB
EGAF50000133707 bai 1.7 MB
EGAF50000133708 bam 261.4 MB
EGAF50000133709 bai 1.8 MB
EGAF50000133710 bam 427.3 MB
EGAF50000133711 bai 302.1 kB
EGAF50000133712 bam 11.2 kB
EGAF50000133713 bai 1.7 MB
EGAF50000133714 bai 1.7 MB
EGAF50000133715 bam 290.6 MB
EGAF50000133716 bai 3.1 MB
EGAF50000133717 bam 368.0 MB
EGAF50000133718 bam 3.3 GB
EGAF50000133719 bai 2.0 MB
EGAF50000133720 bam 324.8 MB
EGAF50000133721 bai 1.8 MB
EGAF50000133722 bam 341.6 MB
EGAF50000133723 bai 3.1 MB
EGAF50000133724 bam 3.8 GB
EGAF50000133725 bai 1.8 MB
EGAF50000133726 bam 276.9 MB
EGAF50000133727 bai 1.7 MB
EGAF50000133728 bai 1.9 MB
EGAF50000133729 bam 319.5 MB
EGAF50000133730 bam 436.1 MB
EGAF50000133731 bai 1.7 MB
EGAF50000133732 bam 681.2 MB
EGAF50000133733 bai 1.7 MB
EGAF50000133734 bam 226.4 MB
EGAF50000133735 bai 1.6 MB
EGAF50000133736 bam 129.4 MB
EGAF50000133737 bai 1.6 MB
EGAF50000133738 bam 82.2 MB
EGAF50000133739 bam 357.0 MB
EGAF50000133740 bai 1.7 MB
EGAF50000133741 bai 2.6 MB
EGAF50000133742 bam 4.0 GB
EGAF50000133743 bai 2.2 MB
EGAF50000133744 bam 2.5 GB
EGAF50000133745 bai 2.2 MB
EGAF50000133746 bai 2.0 MB
EGAF50000133747 bai 2.1 MB
EGAF50000133748 bam 2.3 GB
EGAF50000133749 bai 2.4 MB
EGAF50000133750 bai 2.3 MB
EGAF50000133751 bam 2.8 GB
EGAF50000133752 bai 2.3 MB
EGAF50000133753 bam 2.7 GB
EGAF50000133754 bai 2.5 MB
EGAF50000133755 bam 2.7 GB
EGAF50000133756 bam 3.5 GB
EGAF50000133757 bai 2.4 MB
EGAF50000133758 bam 3.1 GB
EGAF50000133759 bam 2.6 GB
EGAF50000133760 bai 2.2 MB
EGAF50000133761 bai 2.2 MB
EGAF50000133762 bai 2.3 MB
EGAF50000133763 bam 2.8 GB
EGAF50000133764 bam 815.3 MB
EGAF50000133765 bai 2.6 MB
EGAF50000133766 bai 422.3 kB
EGAF50000133767 bam 78.0 kB
EGAF50000133768 bai 2.3 MB
EGAF50000133769 bam 3.2 GB
EGAF50000133770 bai 2.2 MB
EGAF50000133771 bam 2.6 GB
EGAF50000133772 bai 86.0 kB
EGAF50000133773 bam 9.0 kB
EGAF50000133774 bam 2.8 GB
EGAF50000133775 bai 1.6 MB
EGAF50000133776 bam 359.3 MB
EGAF50000133777 bai 155.0 kB
EGAF50000133778 bam 30.6 kB
EGAF50000133779 bai 2.2 MB
EGAF50000133780 bai 2.2 MB
EGAF50000133781 bam 3.0 GB
EGAF50000133782 bam 3.9 GB
EGAF50000133783 bai 2.5 MB
EGAF50000133784 bam 3.6 GB
EGAF50000133785 bam 353.7 MB
EGAF50000133786 bai 1.6 MB
EGAF50000133787 bai 2.4 MB
EGAF50000133788 bai 2.6 MB
EGAF50000133789 bam 3.0 GB
EGAF50000133790 bam 4.2 GB
EGAF50000133791 bai 1.5 MB
EGAF50000133792 bam 417.4 MB
EGAF50000133793 bam 951.4 MB
EGAF50000133794 bai 2.1 MB
EGAF50000133795 bai 1.6 MB
EGAF50000133796 bam 2.8 GB
EGAF50000133797 bai 2.2 MB
EGAF50000133798 bam 3.0 GB
EGAF50000133799 bam 578.5 MB
EGAF50000133800 bai 1.8 MB
EGAF50000133801 bai 2.0 MB
EGAF50000133802 bam 532.7 MB
EGAF50000133803 fastq.gz 140.1 MB
EGAF50000133804 fastq.gz 162.6 MB
EGAF50000133805 fastq.gz 128.8 MB
EGAF50000133806 fastq.gz 140.2 MB
EGAF50000133807 fastq.gz 151.4 MB
EGAF50000133808 fastq.gz 163.6 MB
EGAF50000133809 fastq.gz 131.2 MB
EGAF50000133810 fastq.gz 144.9 MB
EGAF50000133811 fastq.gz 271.0 MB
EGAF50000133812 fastq.gz 246.2 MB
EGAF50000133813 fastq.gz 83.8 MB
EGAF50000133814 fastq.gz 149.0 MB
EGAF50000133815 fastq.gz 134.2 MB
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700 Files (401.9 GB)