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bulk RNA-seq data

a total number of 99 bulk RNA-seq lymphoma samples

Request Access

University health network data access commitee; EGAC00001000912

DATA ACCESS AGREEMENT These terms and conditions govern access to the managed access datasets (details of which are set out in Appendix I) to which the User Institution has requested access. The User Institution agrees to be bound by these terms and conditions. Definitions Authorized Personnel: The individuals at the User Institution to whom the Data Access Committee (DAC) grants access to the Data. This includes the User, and those individuals under the direct supervision of the User, as well as any other individuals listed in Appendix II. Details of the initial Authorized Personnel are set out in Appendix II. Data: The managed access datasets to which the User Institution has requested access, as is outlined in the Appendix 1 attached hereto. Data Producers: The Principal Investigator responsible for the creation of this Data and other investigators responsible for the creation of this Data. External Collaborator: A collaborator of the User, working for an institution other than the User Institution. Project: The project for which the User Institution has requested access to these Data. A description of the Project is set out in Appendix II. Publications: Includes, without limitation, articles published in print journals, electronic journals, reviews, books, posters and other written and verbal presentations of research. Research Participant: An individual whose data form part of these Data. Research Purposes: Shall mean research that is seeking to advance the understanding of genetics and genomics, including the treatment of disorders, and work on statistical methods that may be applied to such research. Research Ethics Board Approval shall mean approval of the Project by the User Institution’s research ethics board or other research ethics board or independent review board for whom said User Institution obtains research ethics approval(s). User: The principal investigator for the Project. User Institution(s): The Institution that has requested access to the Data. University Health Network: The University Health Network (UHN) is the largest clinical and research hospital in Canada. UHN is affiliated with the University of Toronto and is a member of the Toronto Academic Health Science Network. 1. The User Institution agrees to only use these Data for the purpose of the Project (described in Appendix II) within the Research Purposes, and only in accordance with Research Ethics Board Approval, and any conditions or restrictions imposed pursuant to such Research Ethics Board Approval. The User Institution further agrees that it will only use these Data for Research Purposes which are within the limitations (if any) set out in Appendix I. 2. The User Institution agrees to preserve, at all times, the confidentiality of these Data. In particular, it undertakes not to use, or attempt to use these Data to compromise or otherwise breach the anonymity of the Research Participants, including agreeing to not attempt to re-identify or contact any Research Participant. Without prejudice to the generality of the foregoing, the User Institution agrees to use at least the measures set out in Appendix I to protect the Data. Despite the confidentiality of the Data, the User Institution may publish aggregate data and other results arising from use of the Data and may refer to the Data by reference to the accession number(s) as documented in Appendix I in further support of any publication resulting from use of said Data. 3. The User Institution agrees to protect the confidentiality of Research Participants in any research papers or publications that they prepare by taking all reasonable care to limit the possibility of re-identification. 4. The User Institution agrees not to link or combine these Data to other information or archived data in a way that could re-identify the Research Participants, even if access to that other data has been formally granted to the User Institution or is freely available without restriction. 5. The User Institution agrees only to transfer or disclose these Data, in whole or part, or any material derived from these Data, to the Authorized Personnel. Should the User Institution wish to share these Data with an External Collaborator, the External Collaborator must complete a separate application for access to these Data and enter into a separate Data Access Agreement. 6. The User Institution agrees that the Data Producers, and all other parties involved in the creation, funding or provision of these Data: a) make no warranty or representation, express or implied as to the accuracy, quality or comprehensiveness of these Data; b) exclude to the fullest extent permitted by law all liability for actions, claims, proceedings, demands, losses (including but not limited to loss of profit), costs, awards damages and payments made by the Recipient that may arise (whether directly or indirectly) in any way whatsoever from the Recipient’s use of these Data or from the unavailability of, or break in access to, these Data for whatever reason and; c) bear no responsibility for the further analysis or interpretation of these Data. 7. The User Institution agrees recognize the contribution of the Data Producers and include a proper acknowledgement in all reports or publications resulting from the use of these Data. 8. The User Institution agrees to follow the Publication Policy in Appendix III. This includes respecting the moratorium period for the Data Producers to publish the first peer-reviewed report describing and analyzing these Data. 9. The User Institution agrees not to make intellectual property claims on these Data and not to use intellectual property protection in ways that would prevent or block access to, or use of, any element of these Data, or conclusion drawn directly from these Data. 10. The User Institution can elect to perform further research that would add intellectual and resource capital to these data and decide to obtain intellectual property rights on these downstream discoveries. 11. The User Institution agrees to destroy/delete the Data held, once it is no longer being used for the Project, or in the event that the User departs the User Institution or otherwise can no longer complete the Project, with the proviso that the User Institution can retain a copy of the Data for archival purposes only in conformity with audit or legal requirements. 12. The User Institution will notify the DAC within 30 days of any changes or departures of the User, at which point the Project will terminate and the User Institution delete or destroy the Data (as per Section 11) unless otherwise agreed by the DAC. 13. The User Institution will notify the DAC prior to any significant changes to the protocol for the Project. 14. The User Institution will notify the DAC as soon as it becomes aware of a breach of the terms or conditions of this agreement. 15. Either party may terminate this agreement by written notice to the other party. If this agreement terminates for any reason, the User Institution will be required to destroy any Data held, including copies and backup copies. This clause does not prevent the User Institution from retaining these data for archival purpose in conformity with audit or legal requirements. 16. The User Institution accepts that it may be necessary for the Data Producers to alter the terms of this agreement from time to time. In the event that changes are required, the Data Producers or their appointed agent will contact the User Institution to inform it of the changes and the User Institution may elect to accept the changes or terminate the agreement. 17. If requested, the User Institution will allow data security and management documentation to be inspected to verify that it is complying with the terms of this agreement. 18. The User Institution agrees to distribute a copy of these terms to the Authorized Personnel. The User Institution will procure that the Authorized Personnel comply with the terms of this agreement. 19. The Parties agree to remain silent on choice of law.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000435 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00008487311 fastq.gz 843.1 MB
EGAF00008487312 fastq.gz 850.9 MB
EGAF00008487313 fastq.gz 912.1 MB
EGAF00008487314 fastq.gz 949.4 MB
EGAF00008487315 fastq.gz 943.1 MB
EGAF00008487316 fastq.gz 3.7 GB
EGAF00008487318 fastq.gz 4.0 GB
EGAF00008487324 fastq.gz 5.0 GB
EGAF00008487325 fastq.gz 5.3 GB
EGAF00008487326 fastq.gz 5.3 GB
EGAF00008487327 fastq.gz 5.5 GB
EGAF00008487330 fastq.gz 922.3 MB
EGAF00008487331 fastq.gz 4.2 GB
EGAF00008487333 fastq.gz 4.8 GB
EGAF00008487334 fastq.gz 3.9 GB
EGAF00008487335 fastq.gz 4.8 GB
EGAF00008487336 fastq.gz 4.1 GB
EGAF00008487337 fastq.gz 4.5 GB
EGAF00008487338 fastq.gz 5.3 GB
EGAF00008487339 fastq.gz 4.0 GB
EGAF00008487340 fastq.gz 4.5 GB
EGAF00008487341 fastq.gz 4.4 GB
EGAF00008487342 fastq.gz 4.0 GB
EGAF00008487344 fastq.gz 4.1 GB
EGAF00008487345 fastq.gz 4.1 GB
EGAF00008487346 fastq.gz 4.2 GB
EGAF00008487348 fastq.gz 5.5 GB
EGAF00008487353 fastq.gz 4.1 GB
EGAF00008487354 fastq.gz 4.1 GB
EGAF00008487355 fastq.gz 3.9 GB
EGAF00008487356 fastq.gz 1.3 GB
EGAF00008487360 fastq.gz 4.3 GB
EGAF00008487363 fastq.gz 3.9 GB
EGAF00008487368 fastq.gz 4.4 GB
EGAF00008487370 fastq.gz 4.4 GB
EGAF00008487371 fastq.gz 4.8 GB
EGAF00008487372 fastq.gz 4.0 GB
EGAF00008487374 fastq.gz 4.0 GB
EGAF00008487376 fastq.gz 4.3 GB
EGAF00008487377 fastq.gz 4.5 GB
EGAF00008487378 fastq.gz 4.4 GB
EGAF00008487379 fastq.gz 1.1 GB
EGAF00008487380 fastq.gz 4.9 GB
EGAF00008487384 fastq.gz 3.9 GB
EGAF00008487385 fastq.gz 4.4 GB
EGAF00008487387 fastq.gz 4.2 GB
EGAF00008487388 fastq.gz 3.7 GB
EGAF00008487390 fastq.gz 3.9 GB
EGAF00008487391 fastq.gz 4.0 GB
EGAF00008487392 fastq.gz 3.9 GB
EGAF00008487393 fastq.gz 3.7 GB
EGAF00008487398 fastq.gz 4.0 GB
EGAF00008487404 fastq.gz 3.8 GB
EGAF00008487407 fastq.gz 3.8 GB
EGAF00008487410 fastq.gz 3.9 GB
EGAF00008487415 fastq.gz 3.8 GB
EGAF00008487416 fastq.gz 3.9 GB
EGAF00008487417 fastq.gz 3.9 GB
EGAF00008487418 fastq.gz 3.9 GB
EGAF00008487421 fastq.gz 3.8 GB
EGAF00008487426 fastq.gz 3.7 GB
EGAF00008487428 fastq.gz 4.1 GB
EGAF00008487429 fastq.gz 3.9 GB
EGAF00008487430 fastq.gz 3.9 GB
EGAF00008487431 fastq.gz 3.9 GB
EGAF00008487433 fastq.gz 4.0 GB
EGAF00008487434 fastq.gz 4.4 GB
EGAF00008487437 fastq.gz 3.8 GB
EGAF00008487438 fastq.gz 4.1 GB
EGAF00008487439 fastq.gz 4.3 GB
EGAF00008487440 fastq.gz 4.0 GB
EGAF00008487442 fastq.gz 4.1 GB
EGAF00008487446 fastq.gz 3.8 GB
EGAF00008487448 fastq.gz 4.6 GB
EGAF00008487449 fastq.gz 4.4 GB
EGAF00008487450 fastq.gz 4.4 GB
EGAF00008487451 fastq.gz 3.9 GB
EGAF00008487452 fastq.gz 5.1 GB
EGAF00008487453 fastq.gz 4.0 GB
EGAF00008487454 fastq.gz 4.4 GB
EGAF00008487455 fastq.gz 4.5 GB
EGAF00008487456 fastq.gz 4.2 GB
EGAF00008487457 fastq.gz 4.0 GB
EGAF00008487458 fastq.gz 4.2 GB
EGAF00008487459 fastq.gz 5.3 GB
EGAF00008487460 fastq.gz 3.6 GB
EGAF00008487461 fastq.gz 4.1 GB
EGAF00008487462 fastq.gz 4.9 GB
EGAF00008487463 fastq.gz 4.1 GB
EGAF00008487464 fastq.gz 3.9 GB
EGAF00008487465 fastq.gz 4.5 GB
EGAF00008487466 fastq.gz 4.9 GB
EGAF00008487467 fastq.gz 3.9 GB
EGAF00008487468 fastq.gz 4.2 GB
EGAF00008487469 fastq.gz 4.3 GB
EGAF00008487470 fastq.gz 4.7 GB
EGAF00008487472 fastq.gz 5.4 GB
EGAF00008487473 fastq.gz 4.2 GB
EGAF00008487474 fastq.gz 4.8 GB
EGAF00008487475 fastq.gz 4.0 GB
EGAF00008487476 fastq.gz 4.7 GB
EGAF00008487477 fastq.gz 4.8 GB
EGAF00008487480 fastq.gz 4.7 GB
EGAF00008487481 fastq.gz 23.8 GB
EGAF00008487483 fastq.gz 5.3 GB
EGAF00008487484 fastq.gz 4.0 GB
EGAF00008487486 fastq.gz 4.7 GB
EGAF00008487487 fastq.gz 5.0 GB
EGAF00008487489 fastq.gz 21.5 GB
EGAF00008487491 fastq.gz 4.0 GB
EGAF00008487493 fastq.gz 4.2 GB
EGAF00008487494 fastq.gz 4.9 GB
EGAF00008487495 fastq.gz 4.0 GB
EGAF00008487497 fastq.gz 951.0 MB
EGAF00008487498 fastq.gz 5.0 GB
EGAF00008487499 fastq.gz 5.1 GB
EGAF00008487500 fastq.gz 5.2 GB
EGAF00008487501 fastq.gz 4.4 GB
EGAF00008487502 fastq.gz 5.2 GB
EGAF00008487507 fastq.gz 4.2 GB
EGAF00008487508 fastq.gz 4.7 GB
EGAF00008487511 fastq.gz 4.6 GB
EGAF00008487513 fastq.gz 4.0 GB
EGAF00008487514 fastq.gz 4.8 GB
EGAF00008487515 fastq.gz 5.2 GB
EGAF00008487519 fastq.gz 4.3 GB
EGAF00008487522 fastq.gz 4.3 GB
EGAF00008487523 fastq.gz 3.9 GB
EGAF00008487524 fastq.gz 3.5 GB
EGAF00008487526 fastq.gz 4.6 GB
EGAF00008487527 fastq.gz 941.0 MB
EGAF00008487530 fastq.gz 4.8 GB
EGAF00008487531 fastq.gz 9.4 GB
EGAF00008487533 fastq.gz 4.2 GB
EGAF00008487534 fastq.gz 3.7 GB
EGAF00008487535 fastq.gz 9.9 GB
EGAF00008487541 fastq.gz 4.5 GB
EGAF00008487542 fastq.gz 4.6 GB
EGAF00008487546 fastq.gz 4.3 GB
EGAF00008487547 fastq.gz 3.8 GB
EGAF00008487548 fastq.gz 4.2 GB
EGAF00008487551 fastq.gz 5.5 GB
EGAF00008487555 fastq.gz 4.2 GB
EGAF00008487562 fastq.gz 7.8 GB
EGAF00008487566 fastq.gz 4.0 GB
EGAF00008487567 fastq.gz 8.2 GB
EGAF00008487571 fastq.gz 7.7 GB
EGAF00008487573 fastq.gz 8.5 GB
EGAF00008487578 fastq.gz 7.6 GB
EGAF00008487579 fastq.gz 4.8 GB
EGAF00008487580 fastq.gz 7.7 GB
EGAF00008487583 fastq.gz 8.3 GB
EGAF00008487586 fastq.gz 7.9 GB
EGAF00008487588 fastq.gz 8.3 GB
EGAF00008487590 fastq.gz 8.3 GB
EGAF00008487593 fastq.gz 7.8 GB
EGAF00008487594 fastq.gz 8.6 GB
EGAF00008487596 fastq.gz 3.7 GB
EGAF00008487598 fastq.gz 9.0 GB
EGAF00008487601 fastq.gz 1.2 GB
EGAF00008487604 fastq.gz 7.5 GB
EGAF00008487606 fastq.gz 7.8 GB
EGAF00008487609 fastq.gz 8.5 GB
EGAF00008487611 fastq.gz 7.7 GB
EGAF00008487616 fastq.gz 7.6 GB
EGAF00008487621 fastq.gz 7.7 GB
EGAF00008487622 fastq.gz 7.9 GB
EGAF00008487624 fastq.gz 8.2 GB
EGAF00008487626 fastq.gz 5.6 GB
EGAF00008487627 fastq.gz 7.2 GB
EGAF00008487628 fastq.gz 5.8 GB
EGAF00008487635 fastq.gz 8.2 GB
EGAF00008487636 fastq.gz 8.1 GB
EGAF00008487639 fastq.gz 7.0 GB
EGAF00008487644 fastq.gz 7.5 GB
EGAF00008487649 fastq.gz 7.4 GB
EGAF00008487652 fastq.gz 7.7 GB
EGAF00008487663 fastq.gz 7.8 GB
EGAF00008487665 fastq.gz 5.2 GB
EGAF00008487666 fastq.gz 5.8 GB
EGAF00008487669 fastq.gz 5.7 GB
EGAF00008487673 fastq.gz 18.5 GB
EGAF00008487676 fastq.gz 7.6 GB
EGAF00008487678 fastq.gz 8.4 GB
EGAF00008487680 fastq.gz 8.6 GB
EGAF00008487683 fastq.gz 7.0 GB
EGAF00008487684 fastq.gz 5.9 GB
EGAF00008487686 fastq.gz 8.2 GB
EGAF00008487687 fastq.gz 6.9 GB
EGAF00008487693 fastq.gz 17.1 GB
EGAF00008487694 fastq.gz 7.5 GB
EGAF00008487697 fastq.gz 7.0 GB
EGAF00008487699 fastq.gz 15.7 GB
EGAF00008487700 fastq.gz 16.4 GB
EGAF00008487701 fastq.gz 7.6 GB
EGAF00008487702 fastq.gz 1.3 GB
EGAF00008487706 fastq.gz 17.0 GB
EGAF00008487708 fastq.gz 18.5 GB
198 Files (1.1 TB)