Single-cell transcriptomic and T Cell Receptor repertoire characterization of MR1-M3Ade tetramer positive cells from PBMCs of healthy donors
The dataset contains raw FASTQ files from scRNA-seq and scTCR-seq generated using the 10X Genomics chip K (PN: 1000287), combined with the Single Cell Immune Profiling kit (PN: 1000265) from MR1-M3Ade tetramer positive T cells from PBMCs of 6 healthy donors and MR1-M3Ade tetramer negative T cells from PBMCs of 5 of the same 6 donors.
- 23/09/2026
- 11 samples
- DAC: EGAC00001002981
- Technology: Illumina NovaSeq 6000
- Archive: European Genome-phenome Archive (EGA)
Data Access Policy of Datasets controlled by MF-DAC
ATTENTION: Please check the following policy and the documents/information to provide in order to get access to the requested datasets. You can find the governing policy on Zenodo under the link: https://zenodo.org/records/12517622 Please provide all information as requested in the document to the MF-DAC. Additionally, you can find more information about the Data Access Committee of the Medical Faculty of the University of Basel (MF-DAC) under the following link on Zenodo: https://zenodo.org/records/10137776
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000479 | Transcriptome Analysis |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
|
|---|---|---|---|---|
| EGAF50000163136 | 13.6 GB |
|
||
| EGAF50000163137 | 31.6 GB |
|
||
| EGAF50000163138 | 2.8 GB |
|
||
| EGAF50000163139 | 5.7 GB |
|
||
| EGAF50000163140 | 2.7 GB |
|
||
| EGAF50000163141 | 5.5 GB |
|
||
| EGAF50000163142 | 2.7 GB |
|
||
| EGAF50000163143 | 5.4 GB |
|
||
| EGAF50000163144 | 57.0 GB |
|
||
| EGAF50000163145 | 55.5 GB |
|
||
| EGAF50000163146 | 53.2 GB |
|
||
| EGAF50000163147 | 51.8 GB |
|
||
| EGAF50000163148 | 55.4 GB |
|
||
| EGAF50000163149 | 53.2 GB |
|
||
| EGAF50000163150 | 51.0 GB |
|
||
| EGAF50000163151 | 48.8 GB |
|
||
| EGAF50000163152 | 12.8 GB |
|
||
| EGAF50000163153 | 29.5 GB |
|
||
| EGAF50000163154 | 12.6 GB |
|
||
| EGAF50000163155 | 29.2 GB |
|
||
| EGAF50000163156 | 12.9 GB |
|
||
| EGAF50000163157 | 30.2 GB |
|
||
| EGAF50000163158 | 12.8 GB |
|
||
| EGAF50000163159 | 30.0 GB |
|
||
| EGAF50000163160 | 13.4 GB |
|
||
| EGAF50000163161 | 31.3 GB |
|
||
| EGAF50000163162 | 10.5 GB |
|
||
| EGAF50000163163 | 24.4 GB |
|
||
| EGAF50000163164 | 10.5 GB |
|
||
| EGAF50000163165 | 24.3 GB |
|
||
| EGAF50000163166 | 68.7 GB |
|
||
| EGAF50000163167 | 70.4 GB |
|
||
| EGAF50000163168 | 19.6 GB |
|
||
| EGAF50000163169 | 19.1 GB |
|
||
| EGAF50000163170 | 25.6 GB |
|
||
| EGAF50000163171 | 24.8 GB |
|
||
| EGAF50000163172 | 14.7 GB |
|
||
| EGAF50000163173 | 13.5 GB |
|
||
| EGAF50000163174 | 12.3 GB |
|
||
| EGAF50000163175 | 13.4 GB |
|
||
| EGAF50000163176 | 10.6 GB |
|
||
| EGAF50000163177 | 9.3 GB |
|
||
| EGAF50000163178 | 12.0 GB |
|
||
| EGAF50000163179 | 10.4 GB |
|
||
| EGAF50000163180 | 2.5 GB |
|
||
| EGAF50000163181 | 5.4 GB |
|
||
| EGAF50000163182 | 2.5 GB |
|
||
| EGAF50000163183 | 5.3 GB |
|
||
| EGAF50000163184 | 2.6 GB |
|
||
| EGAF50000163185 | 5.5 GB |
|
||
| EGAF50000163186 | 2.6 GB |
|
||
| EGAF50000163187 | 5.4 GB |
|
||
| EGAF50000163188 | 2.8 GB |
|
||
| EGAF50000163189 | 5.7 GB |
|
||
| EGAF50000163190 | 18.6 GB |
|
||
| EGAF50000163191 | 17.5 GB |
|
||
| EGAF50000163192 | 4.9 GB |
|
||
| EGAF50000163193 | 4.4 GB |
|
||
| EGAF50000163194 | 2.4 GB |
|
||
| EGAF50000163195 | 2.2 GB |
|
||
| 60 Files (1.2 TB) | ||||