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sWGS data from 362 tumor with non muscle invasive bladder cancer and 30 blood samples (15 males and 15 females)

A better understanding of the molecular landscape of non-muscle-invasive bladder cancer (NMIBC) is essential to improve risk assessment and identify potential therapeutic targets. Here, we perform a comprehensive genomic analysis of patients diagnosed with NMIBC based on whole-exome- (n=438), shallow whole-genome- (n=362), and total RNA-sequencing (n=414). This dataset contains 876 BAM files corresponding to the full WES dataset. This dataset contains 392 BAM files corresponding to the full sWGS dataset. Tumor samples were sequenced to median coverage of 2.14x (1.24-9.01).

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000513 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000173178 bam 7.7 GB
EGAF50000173179 bam 7.7 GB
EGAF50000173180 bam 6.7 GB
EGAF50000173181 bam 7.4 GB
EGAF50000173182 bam 6.8 GB
EGAF50000173183 bam 7.5 GB
EGAF50000173184 bam 7.0 GB
EGAF50000173185 bam 6.4 GB
EGAF50000173186 bam 7.1 GB
EGAF50000173187 bam 6.8 GB
EGAF50000173188 bam 6.9 GB
EGAF50000173189 bam 6.5 GB
EGAF50000173190 bam 6.9 GB
EGAF50000173191 bam 8.9 GB
EGAF50000173192 bam 7.8 GB
EGAF50000173193 bam 5.9 GB
EGAF50000173194 bam 7.0 GB
EGAF50000173195 bam 7.6 GB
EGAF50000173196 bam 8.2 GB
EGAF50000173197 bam 6.8 GB
EGAF50000173198 bam 6.5 GB
EGAF50000173199 bam 6.9 GB
EGAF50000173200 bam 7.0 GB
EGAF50000173201 bam 7.2 GB
EGAF50000173202 bam 6.2 GB
EGAF50000173203 bam 7.4 GB
EGAF50000173204 bam 7.0 GB
EGAF50000173205 bam 7.6 GB
EGAF50000173206 bam 7.2 GB
EGAF50000173207 bam 7.6 GB
EGAF50000173208 bam 7.6 GB
EGAF50000173209 bam 8.0 GB
EGAF50000173210 bam 6.9 GB
EGAF50000173211 bam 8.3 GB
EGAF50000173212 bam 7.5 GB
EGAF50000173213 bam 7.5 GB
EGAF50000173214 bam 8.7 GB
EGAF50000173215 bam 7.8 GB
EGAF50000173216 bam 7.5 GB
EGAF50000173217 bam 7.9 GB
EGAF50000173218 bam 6.8 GB
EGAF50000173219 bam 8.6 GB
EGAF50000173220 bam 6.7 GB
EGAF50000173221 bam 8.8 GB
EGAF50000173222 bam 7.6 GB
EGAF50000173223 bam 7.5 GB
EGAF50000173224 bam 7.8 GB
EGAF50000173225 bam 8.0 GB
EGAF50000173226 bam 6.7 GB
EGAF50000173227 bam 7.3 GB
EGAF50000173228 bam 7.0 GB
EGAF50000173229 bam 8.0 GB
EGAF50000173230 bam 8.3 GB
EGAF50000173231 bam 8.6 GB
EGAF50000173232 bam 7.1 GB
EGAF50000173233 bam 6.0 GB
EGAF50000173234 bam 7.1 GB
EGAF50000173235 bam 6.9 GB
EGAF50000173236 bam 8.1 GB
EGAF50000173237 bam 9.0 GB
EGAF50000173238 bam 7.2 GB
EGAF50000173239 bam 7.0 GB
EGAF50000173240 bam 8.0 GB
EGAF50000173241 bam 7.1 GB
EGAF50000173242 bam 7.2 GB
EGAF50000173243 bam 7.4 GB
EGAF50000173244 bam 7.3 GB
EGAF50000173245 bam 7.6 GB
EGAF50000173246 bam 7.1 GB
EGAF50000173247 bam 7.7 GB
EGAF50000173248 bam 6.3 GB
EGAF50000173249 bam 8.0 GB
EGAF50000173250 bam 7.1 GB
EGAF50000173251 bam 7.5 GB
EGAF50000173252 bam 7.4 GB
EGAF50000173253 bam 7.3 GB
EGAF50000173254 bam 7.2 GB
EGAF50000173255 bam 6.5 GB
EGAF50000173256 bam 7.2 GB
EGAF50000173257 bam 7.0 GB
EGAF50000173258 bam 7.6 GB
EGAF50000173259 bam 8.0 GB
EGAF50000173260 bam 6.3 GB
EGAF50000173261 bam 7.2 GB
EGAF50000173262 bam 7.2 GB
EGAF50000173263 bam 8.3 GB
EGAF50000173264 bam 12.2 GB
EGAF50000173265 bam 6.8 GB
EGAF50000173266 bam 7.5 GB
EGAF50000173267 bam 7.1 GB
EGAF50000173268 bam 8.9 GB
EGAF50000173269 bam 7.7 GB
EGAF50000173270 bam 7.9 GB
EGAF50000173271 bam 8.2 GB
EGAF50000173272 bam 7.9 GB
EGAF50000173273 bam 7.2 GB
EGAF50000173274 bam 6.6 GB
EGAF50000173275 bam 6.9 GB
EGAF50000173276 bam 7.2 GB
EGAF50000173277 bam 7.3 GB
EGAF50000173278 bam 9.1 GB
EGAF50000173279 bam 6.7 GB
EGAF50000173280 bam 6.1 GB
EGAF50000173281 bam 6.9 GB
EGAF50000173282 bam 6.9 GB
EGAF50000173283 bam 6.3 GB
EGAF50000173284 bam 6.2 GB
EGAF50000173285 bam 8.1 GB
EGAF50000173286 bam 6.7 GB
EGAF50000173287 bam 6.7 GB
EGAF50000173288 bam 7.0 GB
EGAF50000173289 bam 6.3 GB
EGAF50000173290 bam 13.4 GB
EGAF50000173291 bam 9.5 GB
EGAF50000173292 bam 10.6 GB
EGAF50000173293 bam 5.6 GB
EGAF50000173294 bam 6.3 GB
EGAF50000173295 bam 5.9 GB
EGAF50000173296 bam 7.1 GB
EGAF50000173297 bam 6.7 GB
EGAF50000173298 bam 6.0 GB
EGAF50000173299 bam 6.4 GB
EGAF50000173300 bam 5.9 GB
EGAF50000173301 bam 6.7 GB
EGAF50000173302 bam 6.2 GB
EGAF50000173303 bam 7.5 GB
EGAF50000173304 bam 11.8 GB
EGAF50000173305 bam 10.4 GB
EGAF50000173306 bam 7.5 GB
EGAF50000173307 bam 7.4 GB
EGAF50000173308 bam 7.0 GB
EGAF50000173309 bam 7.9 GB
EGAF50000173310 bam 7.0 GB
EGAF50000173311 bam 8.8 GB
EGAF50000173312 bam 8.4 GB
EGAF50000173313 bam 10.2 GB
EGAF50000173314 bam 6.7 GB
EGAF50000173315 bam 6.9 GB
EGAF50000173316 bam 6.3 GB
EGAF50000173317 bam 7.8 GB
EGAF50000173318 bam 8.7 GB
EGAF50000173319 bam 7.5 GB
EGAF50000173320 bam 7.0 GB
EGAF50000173321 bam 8.0 GB
EGAF50000173322 bam 7.0 GB
EGAF50000173323 bam 7.9 GB
EGAF50000173324 bam 7.7 GB
EGAF50000173325 bam 6.8 GB
EGAF50000173326 bam 7.0 GB
EGAF50000173327 bam 7.8 GB
EGAF50000173328 bam 6.3 GB
EGAF50000173329 bam 6.8 GB
EGAF50000173330 bam 6.2 GB
EGAF50000173331 bam 9.8 GB
EGAF50000173332 bam 9.3 GB
EGAF50000173333 bam 7.4 GB
EGAF50000173334 bam 8.8 GB
EGAF50000173335 bam 7.1 GB
EGAF50000173336 bam 6.6 GB
EGAF50000173337 bam 5.4 GB
EGAF50000173338 bam 6.3 GB
EGAF50000173339 bam 6.2 GB
EGAF50000173340 bam 7.7 GB
EGAF50000173341 bam 7.7 GB
EGAF50000173342 bam 7.2 GB
EGAF50000173343 bam 8.2 GB
EGAF50000173344 bam 7.0 GB
EGAF50000173345 bam 6.8 GB
EGAF50000173346 bam 7.1 GB
EGAF50000173347 bam 7.1 GB
EGAF50000173348 bam 7.1 GB
EGAF50000173349 bam 7.1 GB
EGAF50000173350 bam 11.5 GB
EGAF50000173351 bam 11.1 GB
EGAF50000173352 bam 6.4 GB
EGAF50000173353 bam 7.7 GB
EGAF50000173354 bam 7.0 GB
EGAF50000173355 bam 1.5 GB
EGAF50000173356 bam 9.3 GB
EGAF50000173357 bam 6.3 GB
EGAF50000173358 bam 13.4 GB
EGAF50000173359 bam 6.6 GB
EGAF50000173360 bam 13.3 GB
EGAF50000173361 bam 4.5 GB
EGAF50000173362 bam 6.6 GB
EGAF50000173363 bam 2.7 GB
EGAF50000173364 bam 7.0 GB
EGAF50000173365 bam 12.2 GB
EGAF50000173366 bam 7.8 GB
EGAF50000173367 bam 13.3 GB
EGAF50000173368 bam 25.1 GB
EGAF50000173369 bam 6.4 GB
EGAF50000173370 bam 6.2 GB
EGAF50000173371 bam 4.5 GB
EGAF50000173372 bam 6.9 GB
EGAF50000173373 bam 7.4 GB
EGAF50000173374 bam 8.1 GB
EGAF50000173375 bam 7.6 GB
EGAF50000173376 bam 8.6 GB
EGAF50000173377 bam 7.7 GB
EGAF50000173378 bam 6.8 GB
EGAF50000173379 bam 7.3 GB
EGAF50000173380 bam 6.6 GB
EGAF50000173381 bam 9.0 GB
EGAF50000173382 bam 8.8 GB
EGAF50000173383 bam 9.4 GB
EGAF50000173384 bam 6.6 GB
EGAF50000173385 bam 7.6 GB
EGAF50000173386 bam 7.1 GB
EGAF50000173387 bam 6.4 GB
EGAF50000173388 bam 7.9 GB
EGAF50000173389 bam 8.0 GB
EGAF50000173390 bam 7.0 GB
EGAF50000173391 bam 10.2 GB
EGAF50000173392 bam 7.6 GB
EGAF50000173393 bam 8.3 GB
EGAF50000173394 bam 8.2 GB
EGAF50000173395 bam 10.9 GB
EGAF50000173396 bam 7.5 GB
EGAF50000173397 bam 10.8 GB
EGAF50000173398 bam 7.8 GB
EGAF50000173399 bam 7.7 GB
EGAF50000173400 bam 7.4 GB
EGAF50000173401 bam 6.5 GB
EGAF50000173402 bam 6.9 GB
EGAF50000173403 bam 2.1 GB
EGAF50000173404 bam 6.8 GB
EGAF50000173405 bam 6.9 GB
EGAF50000173406 bam 6.2 GB
EGAF50000173407 bam 7.4 GB
EGAF50000173408 bam 7.3 GB
EGAF50000173409 bam 7.8 GB
EGAF50000173410 bam 7.4 GB
EGAF50000173411 bam 6.9 GB
EGAF50000173412 bam 6.8 GB
EGAF50000173413 bam 7.1 GB
EGAF50000173414 bam 6.6 GB
EGAF50000173415 bam 8.2 GB
EGAF50000173416 bam 7.4 GB
EGAF50000173417 bam 6.9 GB
EGAF50000173418 bam 7.4 GB
EGAF50000173419 bam 7.0 GB
EGAF50000173420 bam 6.5 GB
EGAF50000173421 bam 6.4 GB
EGAF50000173422 bam 9.0 GB
EGAF50000173423 bam 7.8 GB
EGAF50000173424 bam 8.7 GB
EGAF50000173425 bam 7.9 GB
EGAF50000173426 bam 7.6 GB
EGAF50000173427 bam 7.3 GB
EGAF50000173428 bam 7.1 GB
EGAF50000173429 bam 7.0 GB
EGAF50000173430 bam 7.3 GB
EGAF50000173431 bam 8.1 GB
EGAF50000173432 bam 8.3 GB
EGAF50000173433 bam 7.8 GB
EGAF50000173434 bam 7.7 GB
EGAF50000173435 bam 8.2 GB
EGAF50000173436 bam 7.4 GB
EGAF50000173437 bam 7.6 GB
EGAF50000173438 bam 6.8 GB
EGAF50000173439 bam 7.8 GB
EGAF50000173440 bam 7.8 GB
EGAF50000173441 bam 6.8 GB
EGAF50000173442 bam 7.2 GB
EGAF50000173443 bam 7.7 GB
EGAF50000173444 bam 7.7 GB
EGAF50000173445 bam 8.9 GB
EGAF50000173446 bam 7.1 GB
EGAF50000173447 bam 8.2 GB
EGAF50000173448 bam 8.0 GB
EGAF50000173449 bam 7.7 GB
EGAF50000173450 bam 7.2 GB
EGAF50000173451 bam 7.5 GB
EGAF50000173452 bam 8.1 GB
EGAF50000173453 bam 7.7 GB
EGAF50000173454 bam 7.8 GB
EGAF50000173455 bam 7.5 GB
EGAF50000173456 bam 7.5 GB
EGAF50000173457 bam 7.4 GB
EGAF50000173458 bam 7.3 GB
EGAF50000173459 bam 8.4 GB
EGAF50000173460 bam 7.9 GB
EGAF50000173461 bam 7.1 GB
EGAF50000173462 bam 7.0 GB
EGAF50000173463 bam 7.2 GB
EGAF50000173464 bam 7.3 GB
EGAF50000173465 bam 7.0 GB
EGAF50000173466 bam 6.4 GB
EGAF50000173467 bam 6.2 GB
EGAF50000173468 bam 7.5 GB
EGAF50000173469 bam 11.3 GB
EGAF50000173470 bam 6.4 GB
EGAF50000173471 bam 7.2 GB
EGAF50000173472 bam 7.0 GB
EGAF50000173473 bam 2.4 GB
EGAF50000173474 bam 7.3 GB
EGAF50000173475 bam 4.0 GB
EGAF50000173476 bam 7.0 GB
EGAF50000173477 bam 8.9 GB
EGAF50000173478 bam 20.6 GB
EGAF50000173479 bam 6.9 GB
EGAF50000173480 bam 6.9 GB
EGAF50000173481 bam 7.4 GB
EGAF50000173482 bam 7.0 GB
EGAF50000173483 bam 7.9 GB
EGAF50000173484 bam 7.7 GB
EGAF50000173485 bam 6.4 GB
EGAF50000173486 bam 7.2 GB
EGAF50000173487 bam 6.9 GB
EGAF50000173488 bam 7.3 GB
EGAF50000173489 bam 7.4 GB
EGAF50000173490 bam 7.9 GB
EGAF50000173491 bam 7.9 GB
EGAF50000173492 bam 7.8 GB
EGAF50000173493 bam 6.7 GB
EGAF50000173494 bam 7.6 GB
EGAF50000173495 bam 7.2 GB
EGAF50000173496 bam 7.0 GB
EGAF50000173497 bam 6.9 GB
EGAF50000173498 bam 7.2 GB
EGAF50000173499 bam 7.0 GB
EGAF50000173500 bam 7.4 GB
EGAF50000173501 bam 6.7 GB
EGAF50000173502 bam 6.8 GB
EGAF50000173503 bam 6.8 GB
EGAF50000173504 bam 6.4 GB
EGAF50000173505 bam 8.0 GB
EGAF50000173506 bam 6.3 GB
EGAF50000173507 bam 6.6 GB
EGAF50000173508 bam 6.7 GB
EGAF50000173509 bam 6.5 GB
EGAF50000173510 bam 5.6 GB
EGAF50000173511 bam 6.8 GB
EGAF50000173512 bam 6.9 GB
EGAF50000173513 bam 6.6 GB
EGAF50000173514 bam 8.1 GB
EGAF50000173515 bam 6.9 GB
EGAF50000173516 bam 6.5 GB
EGAF50000173517 bam 6.4 GB
EGAF50000173518 bam 6.8 GB
EGAF50000173519 bam 6.2 GB
EGAF50000173520 bam 7.7 GB
EGAF50000173521 bam 6.5 GB
EGAF50000173522 bam 5.4 GB
EGAF50000173523 bam 7.2 GB
EGAF50000173524 bam 6.8 GB
EGAF50000173525 bam 7.2 GB
EGAF50000173526 bam 7.2 GB
EGAF50000173527 bam 6.7 GB
EGAF50000173528 bam 7.4 GB
EGAF50000173529 bam 9.2 GB
EGAF50000173530 bam 8.2 GB
EGAF50000173531 bam 8.0 GB
EGAF50000173532 bam 7.5 GB
EGAF50000173533 bam 7.7 GB
EGAF50000173534 bam 7.0 GB
EGAF50000173535 bam 6.9 GB
EGAF50000173536 bam 7.4 GB
EGAF50000173537 bam 8.2 GB
EGAF50000173538 bam 6.8 GB
EGAF50000173539 bam 7.5 GB
EGAF50000173540 bam 6.6 GB
EGAF50000173541 bam 7.1 GB
EGAF50000173542 bam 8.0 GB
EGAF50000173543 bam 7.9 GB
EGAF50000173544 bam 7.3 GB
EGAF50000173545 bam 6.3 GB
EGAF50000173546 bam 7.0 GB
EGAF50000173547 bam 6.5 GB
EGAF50000173548 bam 5.9 GB
EGAF50000173549 bam 7.1 GB
EGAF50000173550 bam 7.9 GB
EGAF50000173551 bam 7.9 GB
EGAF50000173552 bam 7.5 GB
EGAF50000173553 bam 6.4 GB
EGAF50000173554 bam 7.0 GB
EGAF50000173555 bam 7.0 GB
EGAF50000173556 bam 7.5 GB
EGAF50000173557 bam 7.1 GB
EGAF50000173558 bam 7.1 GB
EGAF50000173559 bam 8.5 GB
EGAF50000173560 bam 8.2 GB
EGAF50000173561 bam 6.3 GB
EGAF50000173562 bam 7.9 GB
EGAF50000173563 bam 6.9 GB
EGAF50000173564 bam 6.7 GB
EGAF50000173565 bam 7.5 GB
EGAF50000173566 bam 6.4 GB
EGAF50000173567 bam 7.4 GB
EGAF50000173568 bam 8.0 GB
EGAF50000173569 bam 7.7 GB
392 Files (2.9 TB)