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As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Duplex sequencing of selected breast cancer patients

Investigation of post-zygotic and germline variants using whole exome and ultra-deep duplex sequencing in paired uninvolved margin and primaty tumor samples from 126 breast cancer patients with differing survival outcomes, with skin or blood samples as reference. Pairs of uninvolved margin and blood samples were also collected for 15 reduction mammoplasty patients without personal or familial history of cancer, serving as controls.

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In line with the Data Processing Agreement.

In line with the Data Processing Agreement.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000538 Resequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000178346 fastq.gz 1.6 GB Report
EGAF50000178657 fastq.gz 1.7 GB Report
EGAF50000178658 fastq.gz 1.4 GB Report
EGAF50000178659 fastq.gz 1.5 GB Report
EGAF50000178660 fastq.gz 1.6 GB Report
EGAF50000178661 fastq.gz 1.6 GB Report
EGAF50000178662 fastq.gz 1.7 GB Report
EGAF50000178663 fastq.gz 1.7 GB Report
EGAF50000178664 fastq.gz 1.7 GB Report
EGAF50000178665 fastq.gz 2.3 GB Report
EGAF50000178666 fastq.gz 2.5 GB Report
EGAF50000178667 fastq.gz 1.7 GB Report
EGAF50000178668 fastq.gz 1.6 GB Report
EGAF50000178669 fastq.gz 1.8 GB Report
EGAF50000178670 fastq.gz 1.7 GB Report
EGAF50000178671 fastq.gz 1.9 GB Report
EGAF50000178672 fastq.gz 1.2 GB Report
EGAF50000178673 fastq.gz 1.4 GB Report
EGAF50000178674 fastq.gz 1.5 GB Report
EGAF50000178675 fastq.gz 1.7 GB Report
EGAF50000178676 fastq.gz 1.6 GB Report
EGAF50000178677 fastq.gz 1.6 GB Report
EGAF50000178699 fastq.gz 1.9 GB Report
EGAF50000178724 fastq.gz 1.7 GB Report
EGAF50000178725 fastq.gz 1.4 GB Report
EGAF50000178790 fastq.gz 1.3 GB Report
EGAF50000178888 fastq.gz 2.1 GB Report
EGAF50000178889 fastq.gz 1.4 GB Report
EGAF50000178890 fastq.gz 1.7 GB Report
EGAF50000178891 fastq.gz 1.9 GB Report
EGAF50000178892 fastq.gz 1.9 GB Report
EGAF50000178893 fastq.gz 1.4 GB Report
EGAF50000178894 fastq.gz 1.5 GB Report
EGAF50000178895 fastq.gz 1.4 GB Report
EGAF50000178896 fastq.gz 1.6 GB Report
EGAF50000178897 fastq.gz 1.5 GB Report
EGAF50000178898 fastq.gz 1.5 GB Report
EGAF50000178899 fastq.gz 1.6 GB Report
EGAF50000178900 fastq.gz 1.8 GB Report
EGAF50000178901 fastq.gz 1.9 GB Report
EGAF50000178902 fastq.gz 1.5 GB Report
EGAF50000178903 fastq.gz 1.6 GB Report
EGAF50000178928 fastq.gz 1.7 GB Report
EGAF50000178929 fastq.gz 1.9 GB Report
44 Files (73.4 GB)