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Whole genome sequencing of neuroendocrine tumors of the small intestine

This dataset contains whole genome sequences for 13 patients with neuroendocrine (unique/multiple) tumor(s) of the small intestine. There are in total 25 tumor and 12 matched normal genomes. Libraries were prepared using a Illumina DNA PCR Free kit following the manufacturer’s recommendations and sequencing was performed on Illumina Novaseq6000 machine with a 2x151bp paired-end fashion. It contains data for : - 1 patient with 4 tumors and 1 matched normal - 1 patient with 3 tumors and 1 matched normal - 1 patient with 2 tumors, 1 liver metastasis and 1 matched normal - 2 patients with 1 tumor, 1 mesenteric nodule and 1 matched normal - 7 patients with 1 tumor and 1 matched normal - 1 patient with 3 tumors and 1 mesenteric nodule

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Non commercial research only - GDPR compliant

Non Commercial Use only Please provide details project synopsis for review by ethical / GDPR / Scientific Committee - Prefered projects : Cancers, Digestive Diseases, Rare Diseases Restriction of use within countries enforcing a strict Patient Data / Personal Data Protection Regulation such as EU GDPR or EU approved countries 2 years maximum use - Exceptions possible in specific cases if approved by ethical committee All publications of project results involving direct or indirect use of the results must acknowledge the contribution support of : "Centre Leon Berard - CLB - Comprehensive Cancer Center, Lyon France" "Cancer Research Center of Lyon - CRCL - U1052 - UMR5286, Lyon France" User shall provide a short summary report of its results to the dataset supplier for patient transparency purpose Population origins or ancestry research prohibited

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000642 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000215759 fastq.gz 7.8 GB
EGAF50000215794 fastq.gz 7.2 GB
EGAF50000215795 fastq.gz 7.3 GB
EGAF50000215796 fastq.gz 7.2 GB
EGAF50000215797 fastq.gz 7.4 GB
EGAF50000215798 fastq.gz 6.1 GB
EGAF50000215799 fastq.gz 6.5 GB
EGAF50000215800 fastq.gz 8.9 GB
EGAF50000215801 fastq.gz 6.9 GB
EGAF50000215802 fastq.gz 7.3 GB
EGAF50000215803 fastq.gz 13.7 GB
EGAF50000215804 fastq.gz 14.2 GB
EGAF50000215805 fastq.gz 8.0 GB
EGAF50000215806 fastq.gz 8.4 GB
EGAF50000215807 fastq.gz 6.9 GB
EGAF50000215808 fastq.gz 11.0 GB
EGAF50000215809 fastq.gz 10.6 GB
EGAF50000215810 fastq.gz 7.3 GB
EGAF50000215811 fastq.gz 8.7 GB
EGAF50000215812 fastq.gz 11.0 GB
EGAF50000215813 fastq.gz 14.0 GB
EGAF50000215814 fastq.gz 14.4 GB
EGAF50000215815 fastq.gz 13.8 GB
EGAF50000215816 fastq.gz 14.3 GB
EGAF50000215817 fastq.gz 8.6 GB
EGAF50000215818 fastq.gz 8.9 GB
EGAF50000215819 fastq.gz 8.6 GB
EGAF50000215820 fastq.gz 8.7 GB
EGAF50000215821 fastq.gz 9.0 GB
EGAF50000215822 fastq.gz 7.0 GB
EGAF50000215823 fastq.gz 7.2 GB
EGAF50000215824 fastq.gz 8.8 GB
EGAF50000215825 fastq.gz 8.0 GB
EGAF50000215826 fastq.gz 8.2 GB
EGAF50000215827 fastq.gz 8.4 GB
EGAF50000215828 fastq.gz 8.6 GB
EGAF50000215829 fastq.gz 10.9 GB
EGAF50000215830 fastq.gz 11.2 GB
EGAF50000215831 fastq.gz 11.0 GB
EGAF50000215832 fastq.gz 9.9 GB
EGAF50000215833 fastq.gz 10.2 GB
EGAF50000215834 fastq.gz 7.7 GB
EGAF50000215835 fastq.gz 9.2 GB
EGAF50000215836 fastq.gz 8.8 GB
EGAF50000215837 fastq.gz 9.1 GB
EGAF50000215838 fastq.gz 8.9 GB
EGAF50000215839 fastq.gz 8.6 GB
EGAF50000215840 fastq.gz 8.9 GB
EGAF50000215841 fastq.gz 10.4 GB
EGAF50000215842 fastq.gz 10.9 GB
EGAF50000215843 fastq.gz 11.0 GB
EGAF50000215844 fastq.gz 8.8 GB
EGAF50000215845 fastq.gz 9.0 GB
EGAF50000215846 fastq.gz 8.9 GB
EGAF50000215847 fastq.gz 9.1 GB
EGAF50000215848 fastq.gz 8.7 GB
EGAF50000215849 fastq.gz 8.9 GB
EGAF50000215850 fastq.gz 8.6 GB
EGAF50000215851 fastq.gz 8.4 GB
EGAF50000215852 fastq.gz 9.2 GB
EGAF50000215853 fastq.gz 9.0 GB
EGAF50000215854 fastq.gz 8.3 GB
EGAF50000215855 fastq.gz 7.6 GB
EGAF50000215856 fastq.gz 7.4 GB
EGAF50000215894 fastq.gz 8.0 GB
EGAF50000215897 fastq.gz 8.0 GB
EGAF50000215898 fastq.gz 8.1 GB
EGAF50000215899 fastq.gz 8.4 GB
EGAF50000215900 fastq.gz 8.1 GB
EGAF50000215901 fastq.gz 8.4 GB
EGAF50000215902 fastq.gz 8.1 GB
EGAF50000215903 fastq.gz 8.2 GB
EGAF50000215904 fastq.gz 8.5 GB
EGAF50000215905 fastq.gz 8.2 GB
EGAF50000215906 fastq.gz 8.1 GB
EGAF50000215907 fastq.gz 10.8 GB
EGAF50000215908 fastq.gz 10.5 GB
EGAF50000215909 fastq.gz 6.1 GB
EGAF50000215910 fastq.gz 11.0 GB
EGAF50000215913 fastq.gz 8.6 GB
EGAF50000215915 fastq.gz 7.3 GB
EGAF50000215921 fastq.gz 6.9 GB
EGAF50000215922 fastq.gz 7.4 GB
EGAF50000215923 fastq.gz 8.9 GB
EGAF50000215924 fastq.gz 10.4 GB
EGAF50000215925 fastq.gz 6.5 GB
EGAF50000215926 fastq.gz 6.2 GB
EGAF50000215927 fastq.gz 8.7 GB
EGAF50000215928 fastq.gz 6.9 GB
EGAF50000215929 fastq.gz 7.1 GB
EGAF50000215930 fastq.gz 7.2 GB
EGAF50000215931 fastq.gz 7.2 GB
EGAF50000215932 fastq.gz 8.5 GB
EGAF50000215933 fastq.gz 11.4 GB
EGAF50000215934 fastq.gz 11.0 GB
EGAF50000215935 fastq.gz 8.1 GB
EGAF50000215936 fastq.gz 8.0 GB
EGAF50000215937 fastq.gz 8.2 GB
EGAF50000215938 fastq.gz 7.4 GB
EGAF50000215939 fastq.gz 8.2 GB
EGAF50000215940 fastq.gz 8.3 GB
EGAF50000215941 fastq.gz 8.6 GB
EGAF50000215942 fastq.gz 7.9 GB
EGAF50000215943 fastq.gz 8.2 GB
EGAF50000215944 fastq.gz 7.4 GB
EGAF50000215945 fastq.gz 7.7 GB
EGAF50000215990 fastq.gz 7.7 GB
EGAF50000215991 fastq.gz 7.9 GB
EGAF50000215992 fastq.gz 9.0 GB
EGAF50000215993 fastq.gz 9.3 GB
EGAF50000216004 fastq.gz 9.0 GB
EGAF50000216005 fastq.gz 9.0 GB
EGAF50000216006 fastq.gz 8.8 GB
EGAF50000216011 fastq.gz 9.5 GB
EGAF50000216012 fastq.gz 9.9 GB
EGAF50000216013 fastq.gz 9.7 GB
EGAF50000216014 fastq.gz 10.0 GB
EGAF50000216015 fastq.gz 9.8 GB
EGAF50000216055 fastq.gz 10.8 GB
EGAF50000216056 fastq.gz 9.1 GB
EGAF50000216057 fastq.gz 8.7 GB
EGAF50000216060 fastq.gz 8.3 GB
EGAF50000216061 fastq.gz 8.1 GB
EGAF50000216062 fastq.gz 8.3 GB
EGAF50000216063 fastq.gz 8.9 GB
EGAF50000216064 fastq.gz 6.7 GB
EGAF50000216065 fastq.gz 6.8 GB
EGAF50000216066 fastq.gz 6.7 GB
EGAF50000216067 fastq.gz 6.8 GB
EGAF50000216068 fastq.gz 8.2 GB
EGAF50000216069 fastq.gz 8.0 GB
EGAF50000216070 fastq.gz 7.9 GB
EGAF50000216071 fastq.gz 7.9 GB
EGAF50000216072 fastq.gz 8.8 GB
EGAF50000216073 fastq.gz 8.7 GB
EGAF50000216074 fastq.gz 9.2 GB
EGAF50000216075 fastq.gz 8.8 GB
EGAF50000216076 fastq.gz 9.2 GB
EGAF50000216077 fastq.gz 9.2 GB
EGAF50000216078 fastq.gz 8.9 GB
EGAF50000216079 fastq.gz 10.7 GB
EGAF50000216114 fastq.gz 7.6 GB
EGAF50000216115 fastq.gz 7.3 GB
EGAF50000216116 fastq.gz 8.1 GB
EGAF50000216117 fastq.gz 8.3 GB
EGAF50000216118 fastq.gz 7.2 GB
EGAF50000216119 fastq.gz 7.5 GB
EGAF50000216120 fastq.gz 7.0 GB
EGAF50000216121 fastq.gz 7.0 GB
EGAF50000216122 fastq.gz 7.3 GB
EGAF50000216123 fastq.gz 13.5 GB
EGAF50000216124 fastq.gz 10.1 GB
EGAF50000216125 fastq.gz 6.8 GB
EGAF50000216126 fastq.gz 6.9 GB
EGAF50000216127 fastq.gz 9.2 GB
EGAF50000216128 fastq.gz 8.5 GB
EGAF50000216129 fastq.gz 8.9 GB
EGAF50000216130 fastq.gz 8.6 GB
EGAF50000216131 fastq.gz 8.9 GB
EGAF50000216132 fastq.gz 8.6 GB
EGAF50000216133 fastq.gz 9.0 GB
EGAF50000216134 fastq.gz 10.7 GB
EGAF50000216135 fastq.gz 10.6 GB
EGAF50000216136 fastq.gz 10.9 GB
EGAF50000216137 fastq.gz 11.1 GB
EGAF50000216251 fastq.gz 10.9 GB
EGAF50000216252 fastq.gz 10.7 GB
EGAF50000216253 fastq.gz 11.0 GB
EGAF50000216254 fastq.gz 11.2 GB
EGAF50000216255 fastq.gz 7.2 GB
EGAF50000216256 fastq.gz 8.5 GB
EGAF50000216257 fastq.gz 8.1 GB
EGAF50000216258 fastq.gz 8.5 GB
EGAF50000216259 fastq.gz 8.1 GB
EGAF50000216260 fastq.gz 8.4 GB
EGAF50000216261 fastq.gz 8.6 GB
EGAF50000216262 fastq.gz 8.8 GB
EGAF50000216263 fastq.gz 10.5 GB
EGAF50000216264 fastq.gz 10.9 GB
EGAF50000216265 fastq.gz 10.5 GB
EGAF50000216266 fastq.gz 10.9 GB
EGAF50000216267 fastq.gz 10.6 GB
EGAF50000216268 fastq.gz 6.9 GB
EGAF50000216269 fastq.gz 8.9 GB
EGAF50000216270 fastq.gz 8.6 GB
EGAF50000216271 fastq.gz 8.8 GB
EGAF50000216272 fastq.gz 8.7 GB
EGAF50000216273 fastq.gz 8.9 GB
EGAF50000216274 fastq.gz 8.4 GB
EGAF50000216275 fastq.gz 8.5 GB
EGAF50000216276 fastq.gz 8.7 GB
EGAF50000216277 fastq.gz 8.7 GB
EGAF50000216292 fastq.gz 6.9 GB
EGAF50000216293 fastq.gz 7.1 GB
EGAF50000216294 fastq.gz 8.9 GB
EGAF50000216295 fastq.gz 7.2 GB
EGAF50000216296 fastq.gz 7.1 GB
EGAF50000216297 fastq.gz 7.9 GB
EGAF50000216298 fastq.gz 8.1 GB
EGAF50000216316 fastq.gz 9.1 GB
EGAF50000216317 fastq.gz 9.0 GB
EGAF50000216318 fastq.gz 9.3 GB
EGAF50000216319 fastq.gz 8.1 GB
EGAF50000216320 fastq.gz 6.0 GB
EGAF50000216321 fastq.gz 5.8 GB
EGAF50000216322 fastq.gz 7.6 GB
EGAF50000216323 fastq.gz 7.3 GB
EGAF50000216326 fastq.gz 7.3 GB
EGAF50000216327 fastq.gz 7.5 GB
EGAF50000216328 fastq.gz 7.6 GB
EGAF50000216329 fastq.gz 9.0 GB
EGAF50000216330 fastq.gz 6.0 GB
EGAF50000216331 fastq.gz 5.8 GB
EGAF50000216332 fastq.gz 5.8 GB
EGAF50000216333 fastq.gz 7.8 GB
EGAF50000216334 fastq.gz 8.2 GB
EGAF50000216335 fastq.gz 5.9 GB
EGAF50000216336 fastq.gz 7.6 GB
EGAF50000216337 fastq.gz 7.6 GB
EGAF50000216338 fastq.gz 9.1 GB
EGAF50000216339 fastq.gz 10.9 GB
EGAF50000216357 fastq.gz 7.9 GB
EGAF50000216358 fastq.gz 7.8 GB
EGAF50000216359 fastq.gz 7.9 GB
EGAF50000216360 fastq.gz 8.1 GB
EGAF50000216361 fastq.gz 8.0 GB
EGAF50000216362 fastq.gz 6.9 GB
EGAF50000216363 fastq.gz 6.8 GB
EGAF50000216380 fastq.gz 7.7 GB
EGAF50000216381 fastq.gz 8.0 GB
EGAF50000216382 fastq.gz 7.7 GB
EGAF50000216383 fastq.gz 7.9 GB
EGAF50000216384 fastq.gz 7.7 GB
EGAF50000216385 fastq.gz 7.8 GB
EGAF50000216386 fastq.gz 8.6 GB
EGAF50000216387 fastq.gz 8.4 GB
EGAF50000216388 fastq.gz 8.7 GB
EGAF50000216389 fastq.gz 7.4 GB
EGAF50000216390 fastq.gz 7.9 GB
EGAF50000216391 fastq.gz 8.2 GB
EGAF50000216392 fastq.gz 8.3 GB
EGAF50000216393 fastq.gz 10.6 GB
EGAF50000216394 fastq.gz 11.1 GB
EGAF50000216395 fastq.gz 6.9 GB
EGAF50000216396 fastq.gz 7.1 GB
EGAF50000216397 fastq.gz 7.1 GB
EGAF50000216398 fastq.gz 8.6 GB
EGAF50000216399 fastq.gz 8.8 GB
EGAF50000216400 fastq.gz 8.9 GB
EGAF50000216401 fastq.gz 8.6 GB
EGAF50000216402 fastq.gz 7.2 GB
EGAF50000216403 fastq.gz 14.1 GB
EGAF50000216404 fastq.gz 8.9 GB
EGAF50000216405 fastq.gz 8.7 GB
EGAF50000216406 fastq.gz 8.9 GB
EGAF50000216407 fastq.gz 8.8 GB
EGAF50000216408 fastq.gz 8.7 GB
EGAF50000216409 fastq.gz 9.0 GB
EGAF50000216410 fastq.gz 9.1 GB
EGAF50000216411 fastq.gz 8.8 GB
EGAF50000216412 fastq.gz 6.0 GB
EGAF50000216413 fastq.gz 6.0 GB
EGAF50000216414 fastq.gz 8.3 GB
EGAF50000216415 fastq.gz 8.5 GB
EGAF50000216416 fastq.gz 8.6 GB
EGAF50000216417 fastq.gz 11.5 GB
EGAF50000216418 fastq.gz 11.1 GB
EGAF50000216419 fastq.gz 11.4 GB
EGAF50000216420 fastq.gz 8.1 GB
EGAF50000216421 fastq.gz 8.3 GB
EGAF50000216422 fastq.gz 9.1 GB
EGAF50000216423 fastq.gz 8.7 GB
EGAF50000216424 fastq.gz 9.1 GB
EGAF50000216425 fastq.gz 10.6 GB
EGAF50000216426 fastq.gz 10.9 GB
EGAF50000216437 fastq.gz 8.3 GB
EGAF50000216438 fastq.gz 8.2 GB
EGAF50000216439 fastq.gz 8.5 GB
EGAF50000216440 fastq.gz 11.0 GB
EGAF50000216441 fastq.gz 10.5 GB
EGAF50000216442 fastq.gz 6.5 GB
EGAF50000216443 fastq.gz 7.2 GB
EGAF50000216444 fastq.gz 7.1 GB
EGAF50000216445 fastq.gz 6.1 GB
EGAF50000216446 fastq.gz 6.5 GB
EGAF50000216447 fastq.gz 7.5 GB
EGAF50000216448 fastq.gz 6.9 GB
EGAF50000216449 fastq.gz 7.3 GB
EGAF50000216450 fastq.gz 7.3 GB
EGAF50000216451 fastq.gz 7.0 GB
EGAF50000216461 fastq.gz 8.8 GB
EGAF50000216462 fastq.gz 8.3 GB
EGAF50000216463 fastq.gz 8.7 GB
EGAF50000216464 fastq.gz 8.4 GB
EGAF50000216465 fastq.gz 8.7 GB
EGAF50000216466 fastq.gz 9.1 GB
296 Files (2.5 TB)