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Transcriptomic analysis of metastatic colorectal cancer

Metastatic colorectal cancer (mCRC) is the main cause of CRC mortality, with limited treatment options. Although immunotherapy has benefited some cancer patients, mCRC typically lacks the molecular features that respond to this treatment. However, recent studies indicate that the immune microenvironment of mCRC may be modified to enhance the effect of immune checkpoint inhibitors. This dataset was used to explore the metastatic immune microenvironment by comparing immune cell populations in colorectal liver (CLM), lung (mLu) and peritoneal (PM) metastases.

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Oslo University Hospital Data Access Policy

Oslo University Hospital DAC Guide This guide document attempts at providing a generic overview of General Data Protection Regulation (GDPR)-related concepts that you as a Data Access Committee (DAC) member to a dataset in FEGA Norway need to be aware of in relation to function/policies in your own institution and the GDPR. Reviewing requests for data access to a dataset submitted in FEGA Norway A researcher initiates contact with the DAC main contact person for your dataset Negotiate a Data Access Agreement (DAA) Often in the form of a Data Transfer Agreement, where the requester takes on an independent Data Controller responsibility. Other alternatives are specific Data Processing Agreements or joint Data Controller Agreement, but these require detailed clarifications and regulations up front. FEGA Norway has developed a generic Data Access Agreement of different types: DTA-based template DPA-based template In the event of an approved data access request after a signed DAA, your institution would normally require you to file a notification about The signed DAA and a copy of it Additional considerations regarding the processing of the request, including the requestors ability to secure the data and processing in compliance with the regulations of the dataset. This should be filed through standard mechanisms for notification on projects containing sensitive data in your organisation. Contactfega-norway-support@elixir.no

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000652 RNASeq

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF50000218302 fastq.gz 4.8 GB
EGAF50000218303 fastq.gz 5.2 GB
EGAF50000218304 fastq.gz 8.3 GB
EGAF50000218305 fastq.gz 8.8 GB
EGAF50000218306 fastq.gz 4.4 GB
EGAF50000218307 fastq.gz 4.1 GB
EGAF50000218308 fastq.gz 4.9 GB
EGAF50000218309 fastq.gz 5.3 GB
EGAF50000218310 fastq.gz 4.9 GB
EGAF50000218311 fastq.gz 5.2 GB
EGAF50000218312 fastq.gz 4.7 GB
EGAF50000218313 fastq.gz 5.1 GB
EGAF50000218314 fastq.gz 4.2 GB
EGAF50000218315 fastq.gz 4.5 GB
EGAF50000218316 fastq.gz 5.1 GB
EGAF50000218317 fastq.gz 5.5 GB
EGAF50000218318 fastq.gz 1.8 GB
EGAF50000218319 fastq.gz 1.7 GB
EGAF50000218320 fastq.gz 7.5 GB
EGAF50000218321 fastq.gz 8.0 GB
EGAF50000218322 fastq.gz 6.1 GB
EGAF50000218323 fastq.gz 6.4 GB
EGAF50000218324 fastq.gz 5.7 GB
EGAF50000218325 fastq.gz 5.3 GB
EGAF50000218326 fastq.gz 10.4 GB
EGAF50000218327 fastq.gz 11.1 GB
EGAF50000218328 fastq.gz 6.1 GB
EGAF50000218329 fastq.gz 6.5 GB
EGAF50000218330 fastq.gz 7.0 GB
EGAF50000218331 fastq.gz 6.5 GB
EGAF50000218332 fastq.gz 4.3 GB
EGAF50000218333 fastq.gz 4.5 GB
EGAF50000218334 fastq.gz 2.7 GB
EGAF50000218335 fastq.gz 2.8 GB
EGAF50000218336 fastq.gz 5.5 GB
EGAF50000218337 fastq.gz 5.9 GB
EGAF50000218338 fastq.gz 4.4 GB
EGAF50000218339 fastq.gz 4.7 GB
EGAF50000218340 fastq.gz 3.8 GB
EGAF50000218341 fastq.gz 4.0 GB
EGAF50000218342 fastq.gz 3.6 GB
EGAF50000218343 fastq.gz 3.8 GB
EGAF50000218344 fastq.gz 5.5 GB
EGAF50000218345 fastq.gz 5.2 GB
EGAF50000218346 fastq.gz 4.6 GB
EGAF50000218347 fastq.gz 4.8 GB
EGAF50000218348 fastq.gz 4.2 GB
EGAF50000218349 fastq.gz 4.5 GB
EGAF50000218350 fastq.gz 3.9 GB
EGAF50000218351 fastq.gz 4.1 GB
EGAF50000218352 fastq.gz 3.3 GB
EGAF50000218353 fastq.gz 3.5 GB
EGAF50000218354 fastq.gz 4.1 GB
EGAF50000218355 fastq.gz 4.4 GB
EGAF50000218356 fastq.gz 3.1 GB
EGAF50000218357 fastq.gz 3.3 GB
EGAF50000218358 fastq.gz 3.1 GB
EGAF50000218359 fastq.gz 3.3 GB
EGAF50000218360 fastq.gz 4.0 GB
EGAF50000218361 fastq.gz 4.2 GB
EGAF50000218362 fastq.gz 2.6 GB
EGAF50000218363 fastq.gz 2.7 GB
EGAF50000218364 fastq.gz 3.9 GB
EGAF50000218365 fastq.gz 4.1 GB
EGAF50000218366 fastq.gz 13.9 GB
EGAF50000218367 fastq.gz 13.0 GB
EGAF50000218368 fastq.gz 10.1 GB
EGAF50000218369 fastq.gz 10.7 GB
EGAF50000218370 fastq.gz 4.8 GB
EGAF50000218371 fastq.gz 4.5 GB
EGAF50000218372 fastq.gz 7.2 GB
EGAF50000218373 fastq.gz 7.7 GB
EGAF50000218374 fastq.gz 6.5 GB
EGAF50000218375 fastq.gz 7.0 GB
EGAF50000218376 fastq.gz 3.0 GB
EGAF50000218377 fastq.gz 3.3 GB
EGAF50000218378 fastq.gz 6.6 GB
EGAF50000218379 fastq.gz 6.2 GB
EGAF50000218380 fastq.gz 4.3 GB
EGAF50000218381 fastq.gz 4.6 GB
80 Files (424.9 GB)