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Shallow whole genome sequencing data from circulating tumour DNA (ctDNA) data of High Grade Serous Ovarian Cancer Patients (batch 1)

The dataset contains shallow whole genome sequencing data of 128 high-grade serous carcinoma (HGSC) patients sequenced with Novoseq 6000. The 128 samples are plasma samples that have been collected before treatment. The files provided are paired fastq files.

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The data can only be used for cancer research that is inline with the research areas delineated in the patient consent. These include cancer biomarkers, prognostic factors, mechanisms behind the tumor evolution during treatment and treatment options. The data can also be used for validation of studies published by the contributing consortia (MUPETFaasi2, HERCULES, CHEMORESPONSE).

The data can only be used for cancer research that is inline with the research areas delineated in the patient consent. These include cancer biomarkers, prognostic factors, mechanisms behind the tumor evolution during treatment and treatment options. The data can also be used for validation of studies published by the contributing consortia (MUPETFaasi2, HERCULES, CHEMORESPONSE). See link for full description

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000674 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00008609813 fq.gz 484.5 MB
EGAF00008609814 fq.gz 264.0 MB
EGAF00008609815 fq.gz 262.7 MB
EGAF00008609816 fq.gz 490.5 MB
EGAF00008609817 fq.gz 294.6 MB
EGAF00008609818 fq.gz 626.5 MB
EGAF00008609819 fq.gz 291.9 MB
EGAF00008609820 fq.gz 650.5 MB
EGAF00008609821 fq.gz 341.8 MB
EGAF00008609822 fq.gz 339.7 MB
EGAF00008609823 fq.gz 243.1 MB
EGAF00008609824 fq.gz 242.8 MB
EGAF00008609825 fq.gz 288.0 MB
EGAF00008609826 fq.gz 291.9 MB
EGAF00008609827 fq.gz 348.2 MB
EGAF00008609828 fq.gz 345.0 MB
EGAF00008609829 fq.gz 365.9 MB
EGAF00008609830 fq.gz 371.6 MB
EGAF00008609831 fq.gz 414.4 MB
EGAF00008609832 fq.gz 418.0 MB
EGAF00008609833 fq.gz 344.6 MB
EGAF00008609834 fq.gz 342.5 MB
EGAF00008609835 fq.gz 293.3 MB
EGAF00008609836 fq.gz 297.4 MB
EGAF00008609837 fq.gz 316.6 MB
EGAF00008609838 fq.gz 325.7 MB
EGAF00008609839 fq.gz 385.7 MB
EGAF00008609840 fq.gz 394.4 MB
EGAF00008609841 fq.gz 344.0 MB
EGAF00008609842 fq.gz 342.7 MB
EGAF00008609843 fq.gz 358.0 MB
EGAF00008609844 fq.gz 358.1 MB
EGAF00008609845 fq.gz 360.5 MB
EGAF00008609846 fq.gz 285.4 MB
EGAF00008609847 fq.gz 286.8 MB
EGAF00008609848 fq.gz 366.8 MB
EGAF00008609849 fq.gz 391.9 MB
EGAF00008609850 fq.gz 274.1 MB
EGAF00008609851 fq.gz 398.0 MB
EGAF00008609852 fq.gz 276.0 MB
EGAF00008609853 fq.gz 437.6 MB
EGAF00008609854 fq.gz 300.2 MB
EGAF00008609855 fq.gz 455.7 MB
EGAF00008609856 fq.gz 305.5 MB
EGAF00008609857 fq.gz 364.0 MB
EGAF00008609858 fq.gz 360.3 MB
EGAF00008609859 fq.gz 224.3 MB
EGAF00008609860 fq.gz 224.5 MB
EGAF00008609861 fq.gz 376.8 MB
EGAF00008609862 fq.gz 374.9 MB
EGAF00008609863 fq.gz 253.4 MB
EGAF00008609864 fq.gz 251.9 MB
EGAF00008609865 fq.gz 364.3 MB
EGAF00008609866 fq.gz 370.4 MB
EGAF00008609867 fq.gz 353.2 MB
EGAF00008609868 fq.gz 356.7 MB
EGAF00008609869 fq.gz 297.1 MB
EGAF00008609870 fq.gz 298.7 MB
EGAF00008609871 fq.gz 244.3 MB
EGAF00008609872 fq.gz 246.6 MB
EGAF00008609873 fq.gz 241.1 MB
EGAF00008609874 fq.gz 246.6 MB
EGAF00008609875 fq.gz 360.4 MB
EGAF00008609876 fq.gz 365.2 MB
EGAF00008609877 fq.gz 383.9 MB
EGAF00008609878 fq.gz 245.4 MB
EGAF00008609879 fq.gz 391.5 MB
EGAF00008609880 fq.gz 244.4 MB
EGAF00008609881 fq.gz 269.9 MB
EGAF00008609882 fq.gz 269.8 MB
EGAF00008609883 fq.gz 393.8 MB
EGAF00008609884 fq.gz 257.0 MB
EGAF00008609885 fq.gz 42.0 MB
EGAF00008609886 fq.gz 262.5 MB
EGAF00008609887 fq.gz 392.3 MB
EGAF00008609888 fq.gz 43.0 MB
EGAF00008609889 fq.gz 301.2 MB
EGAF00008609890 fq.gz 298.9 MB
EGAF00008609891 fq.gz 318.9 MB
EGAF00008609892 fq.gz 321.8 MB
EGAF00008609893 fq.gz 189.3 MB
EGAF00008609894 fq.gz 189.6 MB
EGAF00008609895 fq.gz 165.4 MB
EGAF00008609896 fq.gz 167.6 MB
EGAF00008609897 fq.gz 295.8 MB
EGAF00008609898 fq.gz 294.7 MB
EGAF00008609899 fq.gz 249.4 MB
EGAF00008609900 fq.gz 249.8 MB
EGAF00008609901 fq.gz 51.5 MB
EGAF00008609902 fq.gz 51.3 MB
EGAF00008609903 fq.gz 254.8 MB
EGAF00008609904 fq.gz 249.2 MB
EGAF00008609905 fq.gz 479.3 MB
EGAF00008609906 fq.gz 499.7 MB
EGAF00008609907 fq.gz 467.7 MB
EGAF00008609908 fq.gz 470.2 MB
EGAF00008609909 fq.gz 374.0 MB
EGAF00008609910 fq.gz 389.8 MB
EGAF00008609911 fq.gz 382.5 MB
EGAF00008609912 fq.gz 396.8 MB
EGAF00008609913 fq.gz 282.3 MB
EGAF00008609914 fq.gz 281.8 MB
EGAF00008609915 fq.gz 428.4 MB
EGAF00008609916 fq.gz 443.6 MB
EGAF00008609917 fq.gz 322.9 MB
EGAF00008609918 fq.gz 329.5 MB
EGAF00008609919 fq.gz 395.7 MB
EGAF00008609920 fq.gz 407.8 MB
EGAF00008609921 fq.gz 389.5 MB
EGAF00008609922 fq.gz 363.5 MB
EGAF00008609923 fq.gz 401.3 MB
EGAF00008609924 fq.gz 371.4 MB
EGAF00008609925 fq.gz 492.9 MB
EGAF00008609926 fq.gz 350.6 MB
EGAF00008609927 fq.gz 504.5 MB
EGAF00008609928 fq.gz 196.9 MB
EGAF00008609929 fq.gz 357.1 MB
EGAF00008609930 fq.gz 193.0 MB
EGAF00008609931 fq.gz 349.6 MB
EGAF00008609932 fq.gz 353.4 MB
EGAF00008609933 fq.gz 352.5 MB
EGAF00008609934 fq.gz 353.9 MB
EGAF00008609935 fq.gz 383.9 MB
EGAF00008609936 fq.gz 386.5 MB
EGAF00008609937 fq.gz 391.3 MB
EGAF00008609938 fq.gz 396.8 MB
EGAF00008609939 fq.gz 400.6 MB
EGAF00008609940 fq.gz 406.2 MB
EGAF00008609941 fq.gz 341.4 MB
EGAF00008609942 fq.gz 344.1 MB
EGAF00008609943 fq.gz 414.8 MB
EGAF00008609944 fq.gz 229.3 MB
EGAF00008609945 fq.gz 423.0 MB
EGAF00008609946 fq.gz 233.6 MB
EGAF00008609947 fq.gz 370.5 MB
EGAF00008609948 fq.gz 381.1 MB
EGAF00008609949 fq.gz 449.4 MB
EGAF00008609950 fq.gz 450.8 MB
EGAF00008609951 fq.gz 457.9 MB
EGAF00008609952 fq.gz 463.2 MB
EGAF00008609953 fq.gz 392.0 MB
EGAF00008609954 fq.gz 400.2 MB
EGAF00008609955 fq.gz 272.7 MB
EGAF00008609956 fq.gz 278.1 MB
EGAF00008609957 fq.gz 250.4 MB
EGAF00008609958 fq.gz 257.0 MB
EGAF00008609959 fq.gz 151.0 MB
EGAF00008609960 fq.gz 151.6 MB
EGAF00008609961 fq.gz 294.9 MB
EGAF00008609962 fq.gz 301.0 MB
EGAF00008609963 fq.gz 360.6 MB
EGAF00008609964 fq.gz 368.2 MB
EGAF00008609965 fq.gz 372.2 MB
EGAF00008609966 fq.gz 378.1 MB
EGAF00008609967 fq.gz 401.0 MB
EGAF00008609968 fq.gz 402.0 MB
EGAF00008609969 fq.gz 536.7 MB
EGAF00008609970 fq.gz 261.5 MB
EGAF00008609971 fq.gz 266.3 MB
EGAF00008609972 fq.gz 535.3 MB
EGAF00008609973 fq.gz 435.9 MB
EGAF00008609974 fq.gz 431.9 MB
EGAF00008609975 fq.gz 363.6 MB
EGAF00008609976 fq.gz 365.8 MB
EGAF00008609977 fq.gz 285.8 MB
EGAF00008609978 fq.gz 284.1 MB
EGAF00008609979 fq.gz 426.2 MB
EGAF00008609980 fq.gz 430.7 MB
EGAF00008609981 fq.gz 610.4 MB
EGAF00008609982 fq.gz 370.1 MB
EGAF00008609983 fq.gz 625.5 MB
EGAF00008609984 fq.gz 378.2 MB
EGAF00008609985 fq.gz 527.5 MB
EGAF00008609986 fq.gz 531.1 MB
EGAF00008609987 fq.gz 380.7 MB
EGAF00008609988 fq.gz 379.8 MB
EGAF00008609989 fq.gz 330.0 MB
EGAF00008609990 fq.gz 334.3 MB
EGAF00008609991 fq.gz 321.7 MB
EGAF00008609992 fq.gz 324.7 MB
EGAF00008609993 fq.gz 440.3 MB
EGAF00008609994 fq.gz 441.2 MB
EGAF00008609995 fq.gz 366.7 MB
EGAF00008609996 fq.gz 39.3 MB
EGAF00008609997 fq.gz 365.6 MB
EGAF00008609998 fq.gz 38.7 MB
EGAF00008609999 fq.gz 302.0 MB
EGAF00008610000 fq.gz 295.5 MB
EGAF00008610001 fq.gz 302.1 MB
EGAF00008610002 fq.gz 118.4 MB
EGAF00008610003 fq.gz 304.6 MB
EGAF00008610004 fq.gz 121.9 MB
EGAF00008610005 fq.gz 275.8 MB
EGAF00008610006 fq.gz 283.0 MB
EGAF00008610007 fq.gz 1.5 MB
EGAF00008610008 fq.gz 273.9 MB
EGAF00008610009 fq.gz 1.5 MB
EGAF00008610010 fq.gz 280.0 MB
EGAF00008610011 fq.gz 429.9 MB
EGAF00008610012 fq.gz 38.2 MB
EGAF00008610013 fq.gz 37.2 MB
EGAF00008610014 fq.gz 427.7 MB
EGAF00008610015 fq.gz 265.9 MB
EGAF00008610016 fq.gz 273.2 MB
EGAF00008610017 fq.gz 444.1 MB
EGAF00008610018 fq.gz 32.1 MB
EGAF00008610019 fq.gz 445.1 MB
EGAF00008610020 fq.gz 32.2 MB
EGAF00008610021 fq.gz 471.4 MB
EGAF00008610022 fq.gz 480.8 MB
EGAF00008610023 fq.gz 235.5 MB
EGAF00008610024 fq.gz 230.0 MB
EGAF00008610025 fq.gz 255.9 MB
EGAF00008610026 fq.gz 260.9 MB
EGAF00008610027 fq.gz 204.0 MB
EGAF00008610028 fq.gz 205.0 MB
EGAF00008610029 fq.gz 317.4 MB
EGAF00008610030 fq.gz 321.0 MB
EGAF00008610031 fq.gz 211.6 MB
EGAF00008610032 fq.gz 207.9 MB
EGAF00008610033 fq.gz 104.5 MB
EGAF00008610034 fq.gz 106.1 MB
EGAF00008610035 fq.gz 283.2 MB
EGAF00008610036 fq.gz 286.7 MB
EGAF00008610037 fq.gz 267.9 MB
EGAF00008610038 fq.gz 271.2 MB
EGAF00008610039 fq.gz 49.1 MB
EGAF00008610040 fq.gz 455.6 MB
EGAF00008610041 fq.gz 48.8 MB
EGAF00008610042 fq.gz 460.3 MB
EGAF00008610043 fq.gz 240.7 MB
EGAF00008610044 fq.gz 234.4 MB
EGAF00008610045 fq.gz 280.4 MB
EGAF00008610046 fq.gz 557.3 MB
EGAF00008610047 fq.gz 285.2 MB
EGAF00008610048 fq.gz 565.3 MB
EGAF00008610049 fq.gz 363.6 MB
EGAF00008610050 fq.gz 373.8 MB
EGAF00008610051 fq.gz 382.1 MB
EGAF00008610052 fq.gz 369.6 MB
EGAF00008610053 fq.gz 270.7 MB
EGAF00008610054 fq.gz 461.7 MB
EGAF00008610055 fq.gz 271.4 MB
EGAF00008610056 fq.gz 461.3 MB
EGAF00008610057 fq.gz 337.6 MB
EGAF00008610058 fq.gz 341.8 MB
EGAF00008610059 fq.gz 260.3 MB
EGAF00008610060 fq.gz 264.0 MB
EGAF00008610061 fq.gz 318.2 MB
EGAF00008610062 fq.gz 326.6 MB
EGAF00008610063 fq.gz 455.8 MB
EGAF00008610064 fq.gz 39.7 MB
EGAF00008610065 fq.gz 463.6 MB
EGAF00008610066 fq.gz 40.0 MB
EGAF00008610067 fq.gz 792.3 MB
EGAF00008610068 fq.gz 226.5 MB
EGAF00008610069 fq.gz 222.4 MB
EGAF00008610070 fq.gz 824.5 MB
EGAF00008610071 fq.gz 523.2 MB
EGAF00008610072 fq.gz 335.0 MB
EGAF00008610073 fq.gz 532.2 MB
EGAF00008610074 fq.gz 333.9 MB
EGAF00008610075 fq.gz 382.0 MB
EGAF00008610076 fq.gz 384.4 MB
EGAF00008610077 fq.gz 339.5 MB
EGAF00008610078 fq.gz 350.4 MB
EGAF00008610079 fq.gz 342.6 MB
EGAF00008610080 fq.gz 359.9 MB
EGAF00008610081 fq.gz 278.5 MB
EGAF00008610082 fq.gz 288.6 MB
EGAF00008610083 fq.gz 244.2 MB
EGAF00008610084 fq.gz 249.6 MB
EGAF00008610085 fq.gz 335.3 MB
EGAF00008610086 fq.gz 347.9 MB
EGAF00008610087 fq.gz 315.8 MB
EGAF00008610088 fq.gz 328.5 MB
EGAF00008610089 fq.gz 413.3 MB
EGAF00008610090 fq.gz 1.7 MB
EGAF00008610091 fq.gz 417.2 MB
EGAF00008610092 fq.gz 360.3 MB
EGAF00008610093 fq.gz 1.7 MB
EGAF00008610094 fq.gz 370.8 MB
EGAF00008610095 fq.gz 365.3 MB
EGAF00008610096 fq.gz 374.1 MB
284 Files (92.7 GB)