Tumor Profiler Project - OV cell-free DNA data
The dataset contains amplicon sequencing data from 48 samples from 35 different patients with ovarian cancers. Cell free DNA was collected from plasma. Sequencing was performed on an Ion Torrent platform and the sequencing data is provided in bam format.
- 22/04/2025
- 48 samples
- DAC: EGAC50000000199
- Technology: Ion Torrent S5
DUO:0000021 version: 2021-02-23
ethics approval required
This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.
DUO:0000022 version: 2021-02-23
geographical restriction
This data use modifier indicates that use is limited to within a specific geographic region.
Tumor Profiler Data Access Agreement
Data sharing for the TuPro Study datasets is limited to countries deemed to provide an adequate level of data protection under Swiss legislation (https://www.bj.admin.ch/bj/en/home/staat/datenschutz/internationales/anerkennung-staaten.html) in compliance with the Swiss Human Research Act and the conditions specified in patient informed consent.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000000885 | Cancer Genomics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
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|---|---|---|---|---|
| EGAF50000353410 | bam | 13.6 GB |
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| EGAF50000353411 | bam | 14.0 GB |
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| EGAF50000353412 | bam | 17.4 GB |
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| EGAF50000353611 | bam | 15.1 GB |
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| EGAF50000353612 | bam | 32.7 GB |
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| EGAF50000353613 | bam | 13.9 GB |
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| EGAF50000353614 | bam | 14.9 GB |
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| EGAF50000353615 | bam | 11.3 GB |
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| EGAF50000353616 | bam | 14.7 GB |
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| EGAF50000353617 | bam | 18.2 GB |
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| EGAF50000353618 | bam | 14.4 GB |
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| EGAF50000353619 | bam | 10.4 GB |
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| EGAF50000353620 | bam | 11.7 GB |
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| EGAF50000353622 | bam | 10.3 GB |
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| EGAF50000353623 | bam | 12.2 GB |
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| EGAF50000353624 | bam | 18.8 GB |
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| EGAF50000353625 | bam | 23.3 GB |
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| EGAF50000353626 | bam | 16.7 GB |
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| EGAF50000353628 | bam | 12.9 GB |
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| EGAF50000353629 | bam | 13.8 GB |
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| EGAF50000353630 | bam | 13.0 GB |
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| EGAF50000353631 | bam | 14.7 GB |
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| EGAF50000353632 | bam | 18.8 GB |
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| EGAF50000353633 | bam | 14.4 GB |
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| EGAF50000353635 | bam | 10.5 GB |
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| EGAF50000353636 | bam | 13.8 GB |
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| EGAF50000353637 | bam | 14.4 GB |
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| EGAF50000353638 | bam | 10.6 GB |
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| EGAF50000353639 | bam | 15.2 GB |
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| EGAF50000353641 | bam | 11.4 GB |
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| EGAF50000353642 | bam | 12.1 GB |
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| EGAF50000353643 | bam | 15.4 GB |
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| EGAF50000353644 | bam | 22.1 GB |
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| EGAF50000353645 | bam | 15.6 GB |
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| EGAF50000353646 | bam | 13.7 GB |
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| EGAF50000353647 | bam | 12.5 GB |
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| EGAF50000353649 | bam | 9.3 GB |
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| EGAF50000353650 | bam | 11.6 GB |
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| EGAF50000353651 | bam | 12.4 GB |
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| EGAF50000353652 | bam | 17.4 GB |
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| EGAF50000353654 | bam | 12.1 GB |
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| EGAF50000353655 | bam | 4.5 GB |
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| EGAF50000353656 | bam | 11.2 GB |
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| EGAF50000353657 | bam | 17.1 GB |
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| EGAF50000353658 | bam | 9.2 GB |
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| EGAF50000353659 | bam | 10.5 GB |
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| EGAF50000353660 | bam | 13.1 GB |
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| EGAF50000353661 | bam | 14.5 GB |
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| 48 Files (681.3 GB) | ||||