About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Tumor Profiler Project - OV cell-free DNA data additional samples

The dataset contains amplicon sequencing data from 7 samples from 7 different patients with ovarian cancers. Cell free DNA was collected from plasma. Sequencing was performed on an Ion Torrent platform and the sequencing data is provided in bam format. These samples are from patients not classified as having high-grade serous adenocarcinoma.

Request Access

DUO:0000021
version: 2021-02-23

ethics approval required

This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.

DUO:0000022
version: 2021-02-23

geographical restriction

This data use modifier indicates that use is limited to within a specific geographic region.

Tumor Profiler Data Access Agreement

Data sharing for the TuPro Study datasets is limited to countries deemed to provide an adequate level of data protection under Swiss legislation (https://www.bj.admin.ch/bj/en/home/staat/datenschutz/internationales/anerkennung-staaten.html) in compliance with the Swiss Human Research Act and the conditions specified in patient informed consent.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000000885 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000353610 bam 12.2 GB
EGAF50000353621 bam 7.8 GB
EGAF50000353627 bam 13.2 GB
EGAF50000353634 bam 16.6 GB
EGAF50000353640 bam 13.1 GB
EGAF50000353648 bam 18.5 GB
EGAF50000353653 bam 13.0 GB
7 Files (94.4 GB)