10X single cell RNA- and feature barcode sequencing of 38 AML samples
This dataset contains fastq-files from single cell 3' RNA- and feature barcode sequencing of AML samples using 10X technology (Chromium Single Cell 3ʹ Reagent Kit v3). In total, the dataset contains data from 38 AML samples from either bone marrow or peripheral blood, representing the following genetic subtypes: NPM1-mutated, myelodysplasia related, TP53-mutated, CBFB::MYH11, RUNX1::RUNX1T1, AML without class-defining mutations, and AML meeting criteria of two subtypes. The data consists of sequenced gene expression libraries from 38 samples and feature barcoding libraries covering a panel of 10-14 surface proteins for 34 samples.
- 30/06/2025
- 72 samples
- DAC: EGAC50000000619
- Technology: unspecified
- Archive: Federated EGA Sweden Federated EGA Node
Request for data
To request access to these data, please contact request@researchdata.lu.se. Lund University will assess each request based on Swedish laws and regulations.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001084 | Transcriptome Analysis |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report | |
|---|---|---|---|---|
| EGAF50000380929 | fastq.gz | 3.6 GB | ||
| EGAF50000380930 | fastq.gz | 8.0 GB | ||
| EGAF50000380999 | fastq.gz | 3.6 GB | ||
| EGAF50000381000 | fastq.gz | 8.1 GB | ||
| EGAF50000381001 | fastq.gz | 3.1 GB | ||
| EGAF50000381002 | fastq.gz | 7.9 GB | ||
| EGAF50000381003 | fastq.gz | 3.8 GB | ||
| EGAF50000381004 | fastq.gz | 8.9 GB | ||
| EGAF50000381005 | fastq.gz | 4.2 GB | ||
| EGAF50000381006 | fastq.gz | 9.6 GB | ||
| EGAF50000381007 | fastq.gz | 4.2 GB | ||
| EGAF50000381008 | fastq.gz | 9.4 GB | ||
| EGAF50000381009 | fastq.gz | 4.2 GB | ||
| EGAF50000381010 | fastq.gz | 9.7 GB | ||
| EGAF50000381011 | fastq.gz | 1.9 GB | ||
| EGAF50000381012 | fastq.gz | 5.0 GB | ||
| EGAF50000381013 | fastq.gz | 2.1 GB | ||
| EGAF50000381014 | fastq.gz | 5.8 GB | ||
| EGAF50000381015 | fastq.gz | 4.6 GB | ||
| EGAF50000381016 | fastq.gz | 10.3 GB | ||
| EGAF50000381017 | fastq.gz | 3.7 GB | ||
| EGAF50000381018 | fastq.gz | 8.8 GB | ||
| EGAF50000381019 | fastq.gz | 5.6 GB | ||
| EGAF50000381020 | fastq.gz | 15.2 GB | ||
| EGAF50000381021 | fastq.gz | 3.8 GB | ||
| EGAF50000381022 | fastq.gz | 8.6 GB | ||
| EGAF50000381023 | fastq.gz | 3.8 GB | ||
| EGAF50000381024 | fastq.gz | 9.2 GB | ||
| EGAF50000381025 | fastq.gz | 3.0 GB | ||
| EGAF50000381026 | fastq.gz | 6.9 GB | ||
| EGAF50000381027 | fastq.gz | 2.0 GB | ||
| EGAF50000381028 | fastq.gz | 4.7 GB | ||
| EGAF50000381029 | fastq.gz | 4.0 GB | ||
| EGAF50000381030 | fastq.gz | 8.6 GB | ||
| EGAF50000381031 | fastq.gz | 1.8 GB | ||
| EGAF50000381032 | fastq.gz | 4.6 GB | ||
| EGAF50000381033 | fastq.gz | 3.7 GB | ||
| EGAF50000381034 | fastq.gz | 8.7 GB | ||
| EGAF50000381035 | fastq.gz | 3.6 GB | ||
| EGAF50000381036 | fastq.gz | 8.7 GB | ||
| EGAF50000381037 | fastq.gz | 3.7 GB | ||
| EGAF50000381038 | fastq.gz | 8.5 GB | ||
| EGAF50000381039 | fastq.gz | 1.0 GB | ||
| EGAF50000381040 | fastq.gz | 2.6 GB | ||
| EGAF50000381041 | fastq.gz | 3.7 GB | ||
| EGAF50000381042 | fastq.gz | 8.9 GB | ||
| EGAF50000381043 | fastq.gz | 3.6 GB | ||
| EGAF50000381044 | fastq.gz | 8.6 GB | ||
| EGAF50000381045 | fastq.gz | 3.4 GB | ||
| EGAF50000381046 | fastq.gz | 8.3 GB | ||
| EGAF50000381047 | fastq.gz | 3.9 GB | ||
| EGAF50000381048 | fastq.gz | 6.0 GB | ||
| EGAF50000381049 | fastq.gz | 4.7 GB | ||
| EGAF50000381050 | fastq.gz | 6.9 GB | ||
| EGAF50000381051 | fastq.gz | 1.6 GB | ||
| EGAF50000381052 | fastq.gz | 4.1 GB | ||
| EGAF50000381053 | fastq.gz | 3.7 GB | ||
| EGAF50000381054 | fastq.gz | 8.7 GB | ||
| EGAF50000381055 | fastq.gz | 1.5 GB | ||
| EGAF50000381056 | fastq.gz | 3.8 GB | ||
| EGAF50000381057 | fastq.gz | 3.1 GB | ||
| EGAF50000381058 | fastq.gz | 7.2 GB | ||
| EGAF50000381059 | fastq.gz | 3.5 GB | ||
| EGAF50000381060 | fastq.gz | 8.2 GB | ||
| EGAF50000381061 | fastq.gz | 3.7 GB | ||
| EGAF50000381062 | fastq.gz | 8.8 GB | ||
| EGAF50000381063 | fastq.gz | 2.4 GB | ||
| EGAF50000381064 | fastq.gz | 6.1 GB | ||
| EGAF50000381065 | fastq.gz | 3.6 GB | ||
| EGAF50000381066 | fastq.gz | 8.8 GB | ||
| EGAF50000381067 | fastq.gz | 4.2 GB | ||
| EGAF50000381068 | fastq.gz | 9.6 GB | ||
| EGAF50000381069 | fastq.gz | 1.7 GB | ||
| EGAF50000381070 | fastq.gz | 4.1 GB | ||
| EGAF50000381071 | fastq.gz | 3.7 GB | ||
| EGAF50000381072 | fastq.gz | 8.7 GB | ||
| EGAF50000381073 | fastq.gz | 471.8 MB | ||
| EGAF50000381074 | fastq.gz | 932.7 MB | ||
| EGAF50000381075 | fastq.gz | 438.7 MB | ||
| EGAF50000381076 | fastq.gz | 852.1 MB | ||
| EGAF50000381077 | fastq.gz | 618.3 MB | ||
| EGAF50000381078 | fastq.gz | 1.3 GB | ||
| EGAF50000381079 | fastq.gz | 765.5 MB | ||
| EGAF50000381080 | fastq.gz | 1.6 GB | ||
| EGAF50000381081 | fastq.gz | 942.1 MB | ||
| EGAF50000381082 | fastq.gz | 2.0 GB | ||
| EGAF50000381083 | fastq.gz | 587.7 MB | ||
| EGAF50000381084 | fastq.gz | 1.2 GB | ||
| EGAF50000381085 | fastq.gz | 583.2 MB | ||
| EGAF50000381086 | fastq.gz | 1.2 GB | ||
| EGAF50000381091 | fastq.gz | 1.5 GB | ||
| EGAF50000381092 | fastq.gz | 1.1 GB | ||
| EGAF50000381093 | fastq.gz | 572.9 MB | ||
| EGAF50000381094 | fastq.gz | 1.1 GB | ||
| EGAF50000381097 | fastq.gz | 842.5 MB | ||
| EGAF50000381098 | fastq.gz | 1.8 GB | ||
| EGAF50000381099 | fastq.gz | 682.5 MB | ||
| EGAF50000381100 | fastq.gz | 1.4 GB | ||
| EGAF50000381101 | fastq.gz | 619.4 MB | ||
| EGAF50000381102 | fastq.gz | 1.3 GB | ||
| EGAF50000381103 | fastq.gz | 1.2 GB | ||
| EGAF50000381104 | fastq.gz | 2.7 GB | ||
| EGAF50000381105 | fastq.gz | 840.1 MB | ||
| EGAF50000381106 | fastq.gz | 1.8 GB | ||
| EGAF50000381109 | fastq.gz | 852.0 MB | ||
| EGAF50000381110 | fastq.gz | 1.8 GB | ||
| EGAF50000381111 | fastq.gz | 771.5 MB | ||
| EGAF50000381112 | fastq.gz | 1.6 GB | ||
| EGAF50000381113 | fastq.gz | 858.3 MB | ||
| EGAF50000381114 | fastq.gz | 1.8 GB | ||
| EGAF50000381115 | fastq.gz | 1.0 GB | ||
| EGAF50000381116 | fastq.gz | 2.2 GB | ||
| EGAF50000381117 | fastq.gz | 544.7 MB | ||
| EGAF50000381118 | fastq.gz | 1.1 GB | ||
| EGAF50000381119 | fastq.gz | 452.4 MB | ||
| EGAF50000381120 | fastq.gz | 897.1 MB | ||
| EGAF50000381121 | fastq.gz | 406.8 MB | ||
| EGAF50000381122 | fastq.gz | 797.1 MB | ||
| EGAF50000381123 | fastq.gz | 518.8 MB | ||
| EGAF50000381124 | fastq.gz | 1.1 GB | ||
| EGAF50000381125 | fastq.gz | 1.4 GB | ||
| EGAF50000381126 | fastq.gz | 3.1 GB | ||
| EGAF50000381127 | fastq.gz | 1.2 GB | ||
| EGAF50000381128 | fastq.gz | 2.5 GB | ||
| EGAF50000381129 | fastq.gz | 688.8 MB | ||
| EGAF50000381130 | fastq.gz | 1.4 GB | ||
| EGAF50000381131 | fastq.gz | 1.4 GB | ||
| EGAF50000381132 | fastq.gz | 2.9 GB | ||
| EGAF50000381133 | fastq.gz | 650.5 MB | ||
| EGAF50000381134 | fastq.gz | 1.4 GB | ||
| EGAF50000381135 | fastq.gz | 308.3 MB | ||
| EGAF50000381136 | fastq.gz | 592.9 MB | ||
| EGAF50000381137 | fastq.gz | 714.2 MB | ||
| EGAF50000381138 | fastq.gz | 1.5 GB | ||
| EGAF50000381139 | fastq.gz | 722.8 MB | ||
| EGAF50000381140 | fastq.gz | 1.5 GB | ||
| EGAF50000381141 | fastq.gz | 783.8 MB | ||
| EGAF50000381142 | fastq.gz | 1.7 GB | ||
| EGAF50000381143 | fastq.gz | 856.6 MB | ||
| EGAF50000381144 | fastq.gz | 1.9 GB | ||
| EGAF50000381145 | fastq.gz | 1.1 GB | ||
| EGAF50000381146 | fastq.gz | 2.3 GB | ||
| EGAF50000381147 | fastq.gz | 649.4 MB | ||
| EGAF50000381148 | fastq.gz | 1.4 GB | ||
| 144 Files (502.3 GB) | ||||