cryopreserved PBMC
This dataset consists of 12 RNA samples derived from peripheral blood mononuclear cells (PBMCs) collected from three healthy donors. The samples cover four experimental conditions: fresh PBMCs (ID: 517210–517212), PBMCs subjected to a single freeze–thaw cycle (ID: 517213–517215), PBMCs refrozen in freezing mix (ID: 517216–517218), and PBMCs refrozen in TRIzol (ID: 517219–517221). Each sample is provided as a FASTQ file, and RNA sequencing was performed using the Illumina platform. This dataset enables the assessment of cryopreservation effects on PBMC transcriptomic profiles.
- 20/08/2025
- 12 samples
- DAC: EGAC00001002939
- Technology: Illumina NovaSeq 6000
VIB Policy for Data Access and Data Transfer
Applicability This policy applies to the access to and transfer of VIB research datasets that contain non-anonymous Personal Data which are subject to the provisions of the General Data Protection Regulation (EU) 2016/679. Access/transfer conditions - The access/transfer is subject to approval by the VIB Data Access Committee. - The proposed research purpose should not be incompatible with the primary research purpose for which the data were originally generated. - The Recipient shall have in place adequate safeguards for the protection of Personal Data. - Access is subject to a Data Transfer/Access Agreement which will be managed by VIB Innovation & Business. - The Data Transfer/Access will be limited to the Data that are necessary for the proposed research. Access/transfer procedure - Requests to access or obtain non-anonymous datasets should be submitted within the EGA portal, which will then generate a notification to the responsible corresponding author that has uploaded the dataset into the repository, and with a copy to dac@vib.be. - VIB will send a request form to the applicant to complete. - The completed form should amongst other request should contain the following information: o Name, affiliation (legal entity) and contact information of the requesting recipient party. o Reference to the specific dataset(s) for which access or transfer is requested. o Description of the research purpose for which the data will be used. - The VIB Data Access Committee takes decisions to approve access/transfer within 14 days upon receipt of the completed request form. - Data access will be given / Data will be transferred after completion of the Data Transfer/Access Agreement.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001196 | Transcriptome Analysis |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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| EGAF50000417391 | fastq.gz | 1.5 GB |
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| EGAF50000417392 | fastq.gz | 1.3 GB |
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| EGAF50000417393 | fastq.gz | 1.1 GB |
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| EGAF50000417394 | fastq.gz | 1.3 GB |
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| EGAF50000417395 | fastq.gz | 1.4 GB |
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| EGAF50000417396 | fastq.gz | 1.4 GB |
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| EGAF50000417397 | fastq.gz | 840.1 MB |
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| EGAF50000417398 | fastq.gz | 1.1 GB |
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| EGAF50000417399 | fastq.gz | 1.4 GB |
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| EGAF50000417400 | fastq.gz | 1.3 GB |
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| EGAF50000417401 | fastq.gz | 1.5 GB |
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| EGAF50000417402 | fastq.gz | 1.4 GB |
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| 12 Files (15.6 GB) | ||||
