Raw sequencing data from low-input chromosome conformation capture in CD4+ T cells
This dataset contains raw sequencing data from low-input PCHi-C in human primary CD4+ T cells isolated from healthy donors. The data are released as paired-end Illumina FASTQ files. Promoter Capture Hi-C used DpnII digestion and Tn5-based low-input library preparation, followed by targeted capture with custom-designed biotinylated RNA probes targeting most of the annotated gene promoters.
- 24/12/2025
- 4 samples
- DAC: EGAC50000000445
- Technology: Illumina NovaSeq 6000
Access to data from Ray-Jones et al., Nat Comms 2024
Thanks for your interest in our datasets. Please follow the link above to our Data Access Request form, which will require you to provide a project description and the signatures of the data users and your institutional contact. The document is hosted on Google Drive. Go to File -> Download to download it in a format of your choice. Please email the completed document to eqtl-chic-dac-WC@groups.imperial.ac.uk.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001316 | Epigenetics |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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| EGAF50000450698 | fq.gz | 6.6 GB |
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| EGAF50000450699 | fq.gz | 6.7 GB |
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| EGAF50000450700 | fq.gz | 9.8 GB |
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| EGAF50000450701 | fq.gz | 10.2 GB |
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| EGAF50000450702 | fq.gz | 8.3 GB |
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| EGAF50000450703 | fq.gz | 8.6 GB |
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| EGAF50000450704 | fq.gz | 8.3 GB |
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| EGAF50000450705 | fq.gz | 7.7 GB |
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| 8 Files (66.1 GB) | ||||