WGS data of paediatric hyperdiploid B cell acute lymphoblastic leukemia (set1)
The dataset includes FASTQ and BAM files from diagnostic and matched remission (control) samples of three hyperdiploid ALL patients (ALLT-329, ALLT-347, ALLT-356). Sequencing libraries were made using NEB Next® Ultra™ DNA Library Prep Kit. Both diagnostic (60x) and remission (30x) samples were sequenced using Illumina HiSeq X.
- 23/03/2026
- 6 samples
- DAC: EGAC00001001551
- Technology: Illumina HiSeq X
Two PIs (Tampere/Kuopio) and a legal representative of the Tampere University Hospital
Data will be shared if the proposed project falls within the patient/caretaker consent
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001690 | Whole Genome Sequencing |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
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|---|---|---|---|---|
| EGAF50000695052 | bai | 9.3 MB |
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| EGAF50000695063 | bam | 110.2 GB |
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| EGAF50000695064 | bam | 58.5 GB |
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| EGAF50000695066 | bai | 9.4 MB |
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| EGAF50000695067 | bai | 9.3 MB |
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| EGAF50000695077 | fq.gz | 3.9 GB |
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| EGAF50000695078 | fq.gz | 4.0 GB |
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| EGAF50000695079 | fq.gz | 4.1 GB |
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| EGAF50000695082 | bai | 9.3 MB |
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| EGAF50000695096 | fq.gz | 4.1 GB |
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| EGAF50000695097 | fq.gz | 4.2 GB |
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| EGAF50000695098 | fq.gz | 4.0 GB |
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| EGAF50000695099 | fq.gz | 4.2 GB |
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| EGAF50000695100 | fq.gz | 4.0 GB |
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| EGAF50000695101 | fq.gz | 4.1 GB |
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| EGAF50000695102 | fq.gz | 4.1 GB |
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| EGAF50000695103 | fq.gz | 4.2 GB |
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| EGAF50000695104 | fq.gz | 4.1 GB |
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| EGAF50000695105 | fq.gz | 4.0 GB |
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| EGAF50000695106 | fq.gz | 4.1 GB |
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| EGAF50000695107 | fq.gz | 41.6 GB |
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| EGAF50000695108 | fq.gz | 6.2 GB |
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| EGAF50000695109 | fq.gz | 7.3 GB |
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| EGAF50000695110 | fq.gz | 6.4 GB |
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| EGAF50000695111 | fq.gz | 4.2 GB |
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| EGAF50000695112 | fq.gz | 4.3 GB |
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| EGAF50000695150 | fq.gz | 4.0 GB |
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| EGAF50000695151 | fq.gz | 4.0 GB |
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| EGAF50000695153 | fq.gz | 31.1 GB |
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| EGAF50000695155 | fq.gz | 4.3 GB |
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| EGAF50000695156 | fq.gz | 4.1 GB |
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| EGAF50000695157 | fq.gz | 4.2 GB |
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| EGAF50000695158 | fq.gz | 4.2 GB |
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| EGAF50000695159 | fq.gz | 4.3 GB |
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| EGAF50000695160 | fq.gz | 4.4 GB |
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| EGAF50000695161 | fq.gz | 4.3 GB |
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| EGAF50000695162 | fq.gz | 4.2 GB |
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| EGAF50000695163 | fq.gz | 4.3 GB |
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| EGAF50000695164 | fq.gz | 4.3 GB |
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| EGAF50000695165 | fq.gz | 4.4 GB |
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| EGAF50000695166 | fq.gz | 4.3 GB |
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| EGAF50000695167 | fq.gz | 4.5 GB |
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| EGAF50000695181 | bam | 82.2 GB |
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| EGAF50000695198 | bai | 9.3 MB |
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| EGAF50000695199 | bam | 49.4 GB |
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| EGAF50000695201 | bai | 9.3 MB |
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| EGAF50000695202 | bam | 86.8 GB |
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| EGAF50000695203 | bam | 40.2 GB |
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| EGAF50000695205 | fq.gz | 4.0 GB |
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| EGAF50000695206 | fq.gz | 3.9 GB |
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| EGAF50000695211 | fq.gz | 4.1 GB |
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| EGAF50000695222 | fq.gz | 6.1 GB |
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| EGAF50000695223 | fq.gz | 6.1 GB |
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| EGAF50000695224 | fq.gz | 6.4 GB |
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| EGAF50000695225 | fq.gz | 6.3 GB |
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| EGAF50000695235 | fq.gz | 6.1 GB |
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| EGAF50000695236 | fq.gz | 6.1 GB |
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| EGAF50000695239 | fq.gz | 5.9 GB |
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| EGAF50000695240 | fq.gz | 7.5 GB |
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| EGAF50000695242 | fq.gz | 8.8 GB |
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| EGAF50000695245 | fq.gz | 7.2 GB |
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| EGAF50000695247 | fq.gz | 6.3 GB |
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| EGAF50000695250 | fq.gz | 7.5 GB |
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| EGAF50000695265 | fq.gz | 6.4 GB |
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| EGAF50000695266 | fq.gz | 8.5 GB |
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| EGAF50000695267 | fq.gz | 3.9 GB |
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| EGAF50000695268 | fq.gz | 4.3 GB |
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| EGAF50000695269 | fq.gz | 4.2 GB |
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| EGAF50000695270 | fq.gz | 47.2 GB |
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| EGAF50000695271 | fq.gz | 7.6 GB |
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| EGAF50000695277 | fq.gz | 4.2 GB |
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| EGAF50000695280 | fq.gz | 4.3 GB |
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| EGAF50000695281 | fq.gz | 4.4 GB |
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| EGAF50000695282 | fq.gz | 4.7 GB |
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| EGAF50000695283 | fq.gz | 4.4 GB |
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| EGAF50000695284 | fq.gz | 4.6 GB |
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| EGAF50000695285 | fq.gz | 4.4 GB |
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| EGAF50000695286 | fq.gz | 4.6 GB |
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| EGAF50000695292 | fq.gz | 4.0 GB |
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| EGAF50000695293 | fq.gz | 4.2 GB |
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| EGAF50000695297 | fq.gz | 4.5 GB |
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| EGAF50000695301 | fq.gz | 7.2 GB |
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| EGAF50000695313 | fq.gz | 29.9 GB |
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| EGAF50000695320 | fq.gz | 8.5 GB |
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| 84 Files (917.5 GB) | ||||