WGS data of paediatric hyperdiploid B cell acute lymphoblastic leukemia (set2)
The dataset includes FASTQ and BAM files from diagnostic and matched remission (control) samples of two hyperdiploid ALL patients (ALLT-315, ALLT-320). Sequencing libraries were made using PCR free-based WGS library preparation (PCR-), using TruSeq DNA PCRfree library preparation kit v1. Both diagnostic (60x) and remission (30x) samples were sequenced using Illumina HiSeq X.
- 23/03/2026
- 4 samples
- DAC: EGAC00001001551
- Technology: Illumina HiSeq X
Two PIs (Tampere/Kuopio) and a legal representative of the Tampere University Hospital
Data will be shared if the proposed project falls within the patient/caretaker consent
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001690 | Whole Genome Sequencing |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
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|---|---|---|---|---|
| EGAF50000695072 | bai | 9.5 MB |
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| EGAF50000695073 | bam | 134.8 GB |
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| EGAF50000695074 | bai | 9.3 MB |
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| EGAF50000695080 | bam | 135.9 GB |
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| EGAF50000695081 | bam | 73.1 GB |
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| EGAF50000695083 | fastq.gz | 77.9 GB |
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| EGAF50000695089 | fastq.gz | 40.1 GB |
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| EGAF50000695095 | fastq.gz | 71.7 GB |
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| EGAF50000695176 | bam | 68.9 GB |
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| EGAF50000695180 | bai | 9.4 MB |
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| EGAF50000695188 | fastq.gz | 38.0 GB |
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| EGAF50000695192 | fastq.gz | 36.5 GB |
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| EGAF50000695197 | bai | 9.5 MB |
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| EGAF50000695200 | fastq.gz | 77.2 GB |
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| EGAF50000695204 | fastq.gz | 71.4 GB |
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| EGAF50000695300 | fastq.gz | 41.0 GB |
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| 16 Files (866.6 GB) | ||||