WGS data of paediatric hyperdiploid B cell acute lymphoblastic leukemia (set4)
The dataset includes FASTQ and CRAM files from diagnostic and matched remission (control) samples of one hyperdiploid ALL patient (ALLK-134). Sequencing libraries were made using Novogene NGS DNA Library Prep Set (Cat No. PT004). Both diagnostic (90x) and remission (30x) samples were sequenced using Illumina NovaSeq X Plus.
- 23/03/2026
- 2 samples
- DAC: EGAC00001001551
- Technology: Illumina NovaSeq X Plus
Two PIs (Tampere/Kuopio) and a legal representative of the Tampere University Hospital
Data will be shared if the proposed project falls within the patient/caretaker consent
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001690 | Whole Genome Sequencing |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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| EGAF50000695045 | fq.gz | 28.0 GB |
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| EGAF50000695094 | crai | 2.5 MB |
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| EGAF50000695172 | cram | 8.3 GB |
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| EGAF50000695183 | crai | 967.8 kB |
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| EGAF50000695184 | cram | 24.5 GB |
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| EGAF50000695228 | fq.gz | 23.0 GB |
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| EGAF50000695229 | fq.gz | 22.9 GB |
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| EGAF50000695230 | fq.gz | 17.1 GB |
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| EGAF50000695231 | fq.gz | 17.2 GB |
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| EGAF50000695232 | fq.gz | 16.2 GB |
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| EGAF50000695243 | fq.gz | 16.3 GB |
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| EGAF50000695248 | fq.gz | 16.2 GB |
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| EGAF50000695249 | fq.gz | 16.2 GB |
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| EGAF50000695251 | fq.gz | 28.1 GB |
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| 14 Files (233.9 GB) | ||||