About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Plasma cell-free whole genome sequencing

This dataset contains whole genome sequencing data generated from plasma cell-free DNA of metastatic breast cancer patients and healthy individuals. Sequencing was performed on Illumina platforms to an average depth of approximately 10× and the dataset includes raw sequencing reads in FASTQ format.

Request Access

All requests to access data will be assessed by the Peter MacCallum Cancer Centre Data Governance Office. Emails may be directed to dgo@petermac.org.

Please email dgo@petermac.org to obtain the detailed policy regarding data access.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000001759 Cancer Genomics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000786070 fastq.gz 1.2 GB
EGAF50000786071 fastq.gz 8.6 GB
EGAF50000786072 fastq.gz 2.2 GB
EGAF50000786073 fastq.gz 2.2 GB
EGAF50000786074 fastq.gz 8.8 GB
EGAF50000786075 fastq.gz 2.2 GB
EGAF50000786076 fastq.gz 408.3 MB
EGAF50000786077 fastq.gz 8.2 GB
EGAF50000786078 fastq.gz 8.2 GB
EGAF50000786079 fastq.gz 9.0 GB
EGAF50000786080 fastq.gz 7.5 GB
EGAF50000786081 fastq.gz 7.0 GB
EGAF50000786082 fastq.gz 2.4 GB
EGAF50000786083 fastq.gz 7.6 GB
EGAF50000786084 fastq.gz 7.0 GB
EGAF50000786085 fastq.gz 9.2 GB
EGAF50000786086 fastq.gz 13.7 GB
EGAF50000786087 fastq.gz 8.4 GB
EGAF50000786088 fastq.gz 6.5 GB
EGAF50000786089 fastq.gz 8.3 GB
EGAF50000786090 fastq.gz 8.9 GB
EGAF50000786091 fastq.gz 2.0 GB
EGAF50000786092 fastq.gz 8.5 GB
EGAF50000786093 fastq.gz 6.0 GB
EGAF50000786094 fastq.gz 1.7 GB
EGAF50000786095 fastq.gz 7.3 GB
EGAF50000786096 fastq.gz 8.6 GB
EGAF50000786097 fastq.gz 13.8 GB
EGAF50000786098 fastq.gz 8.2 GB
EGAF50000786099 fastq.gz 2.2 GB
EGAF50000786100 fastq.gz 8.5 GB
EGAF50000786101 fastq.gz 8.0 GB
EGAF50000786102 fastq.gz 8.2 GB
EGAF50000786103 fastq.gz 7.2 GB
EGAF50000786104 fastq.gz 8.4 GB
EGAF50000786105 fastq.gz 1.9 GB
EGAF50000786106 fastq.gz 7.7 GB
EGAF50000786107 fastq.gz 6.7 GB
EGAF50000786108 fastq.gz 7.5 GB
EGAF50000786109 fastq.gz 5.8 GB
EGAF50000786110 fastq.gz 1.5 GB
EGAF50000786111 fastq.gz 8.3 GB
EGAF50000786112 fastq.gz 9.5 GB
EGAF50000786113 fastq.gz 1.8 GB
EGAF50000786114 fastq.gz 7.2 GB
EGAF50000786115 fastq.gz 1.6 GB
EGAF50000786116 fastq.gz 426.9 MB
EGAF50000786117 fastq.gz 1.6 GB
EGAF50000786118 fastq.gz 2.0 GB
EGAF50000786119 fastq.gz 7.5 GB
EGAF50000786120 fastq.gz 5.7 GB
EGAF50000786121 fastq.gz 7.3 GB
EGAF50000786122 fastq.gz 7.3 GB
EGAF50000786123 fastq.gz 1.4 GB
EGAF50000786124 fastq.gz 384.0 MB
EGAF50000786125 fastq.gz 1.5 GB
EGAF50000786126 fastq.gz 5.9 GB
EGAF50000786127 fastq.gz 8.4 GB
EGAF50000786128 fastq.gz 2.1 GB
EGAF50000786129 fastq.gz 8.8 GB
EGAF50000786130 fastq.gz 2.3 GB
EGAF50000786131 fastq.gz 8.9 GB
EGAF50000786132 fastq.gz 8.5 GB
EGAF50000786133 fastq.gz 2.2 GB
EGAF50000786134 fastq.gz 5.7 GB
EGAF50000786135 fastq.gz 1.5 GB
EGAF50000786136 fastq.gz 7.4 GB
EGAF50000786137 fastq.gz 4.2 GB
EGAF50000786138 fastq.gz 1.1 GB
EGAF50000786139 fastq.gz 1.8 GB
EGAF50000786140 fastq.gz 2.2 GB
EGAF50000786141 fastq.gz 5.8 GB
EGAF50000786142 fastq.gz 13.0 GB
EGAF50000786143 fastq.gz 4.4 GB
EGAF50000786144 fastq.gz 3.2 GB
EGAF50000786145 fastq.gz 7.4 GB
EGAF50000786146 fastq.gz 8.7 GB
EGAF50000786147 fastq.gz 8.1 GB
EGAF50000786148 fastq.gz 1.8 GB
EGAF50000786149 fastq.gz 1.2 GB
EGAF50000786150 fastq.gz 2.1 GB
EGAF50000786215 fastq.gz 1.2 GB
EGAF50000786216 fastq.gz 323.7 MB
EGAF50000786217 fastq.gz 1.2 GB
EGAF50000786218 fastq.gz 2.1 GB
EGAF50000786219 fastq.gz 8.6 GB
EGAF50000786220 fastq.gz 8.6 GB
EGAF50000786221 fastq.gz 2.2 GB
EGAF50000786222 fastq.gz 8.5 GB
EGAF50000786223 fastq.gz 8.8 GB
EGAF50000786224 fastq.gz 2.3 GB
EGAF50000786225 fastq.gz 8.4 GB
EGAF50000786226 fastq.gz 7.9 GB
EGAF50000786227 fastq.gz 2.1 GB
EGAF50000786228 fastq.gz 2.1 GB
EGAF50000786229 fastq.gz 2.5 GB
EGAF50000786230 fastq.gz 9.7 GB
EGAF50000786231 fastq.gz 8.4 GB
EGAF50000786232 fastq.gz 8.9 GB
EGAF50000786233 fastq.gz 9.0 GB
EGAF50000786234 fastq.gz 9.2 GB
EGAF50000786235 fastq.gz 2.4 GB
EGAF50000786236 fastq.gz 9.4 GB
EGAF50000786237 fastq.gz 8.5 GB
EGAF50000786238 fastq.gz 8.6 GB
EGAF50000786239 fastq.gz 8.5 GB
EGAF50000786240 fastq.gz 6.5 GB
EGAF50000786241 fastq.gz 6.9 GB
EGAF50000786242 fastq.gz 1.9 GB
EGAF50000786243 fastq.gz 6.1 GB
EGAF50000786244 fastq.gz 1.6 GB
EGAF50000786245 fastq.gz 7.2 GB
EGAF50000786246 fastq.gz 1.8 GB
EGAF50000786247 fastq.gz 4.9 GB
EGAF50000786248 fastq.gz 1.3 GB
EGAF50000786249 fastq.gz 5.4 GB
EGAF50000786250 fastq.gz 7.0 GB
EGAF50000786251 fastq.gz 1.7 GB
EGAF50000786252 fastq.gz 1.8 GB
EGAF50000786253 fastq.gz 7.4 GB
EGAF50000786254 fastq.gz 4.7 GB
EGAF50000786255 fastq.gz 1.2 GB
EGAF50000786256 fastq.gz 4.9 GB
EGAF50000786257 fastq.gz 8.2 GB
EGAF50000786258 fastq.gz 4.6 GB
EGAF50000786259 fastq.gz 1.2 GB
EGAF50000786260 fastq.gz 4.8 GB
EGAF50000786261 fastq.gz 7.5 GB
EGAF50000786262 fastq.gz 1.9 GB
EGAF50000786263 fastq.gz 7.6 GB
EGAF50000786264 fastq.gz 4.2 GB
EGAF50000786265 fastq.gz 1.1 GB
EGAF50000786266 fastq.gz 4.3 GB
EGAF50000786267 fastq.gz 8.5 GB
EGAF50000786268 fastq.gz 2.1 GB
EGAF50000786269 fastq.gz 2.4 GB
EGAF50000786270 fastq.gz 635.9 MB
EGAF50000786271 fastq.gz 2.5 GB
EGAF50000786272 fastq.gz 4.9 GB
EGAF50000786273 fastq.gz 1.3 GB
EGAF50000786274 fastq.gz 5.1 GB
EGAF50000786275 fastq.gz 6.6 GB
EGAF50000786276 fastq.gz 1.7 GB
EGAF50000786277 fastq.gz 1.9 GB
EGAF50000786278 fastq.gz 7.6 GB
EGAF50000786279 fastq.gz 1.6 GB
EGAF50000786280 fastq.gz 1.6 GB
EGAF50000786281 fastq.gz 5.9 GB
EGAF50000786282 fastq.gz 6.7 GB
EGAF50000786283 fastq.gz 1.7 GB
EGAF50000786284 fastq.gz 1.4 GB
EGAF50000786285 fastq.gz 5.8 GB
EGAF50000786286 fastq.gz 6.2 GB
EGAF50000786287 fastq.gz 1.5 GB
EGAF50000786288 fastq.gz 5.2 GB
EGAF50000786289 fastq.gz 1.3 GB
EGAF50000786290 fastq.gz 5.4 GB
EGAF50000786291 fastq.gz 2.1 GB
EGAF50000786292 fastq.gz 8.1 GB
EGAF50000786293 fastq.gz 8.2 GB
EGAF50000786294 fastq.gz 1.5 GB
EGAF50000786295 fastq.gz 6.3 GB
EGAF50000786296 fastq.gz 7.3 GB
EGAF50000786297 fastq.gz 8.3 GB
EGAF50000786298 fastq.gz 2.1 GB
EGAF50000786299 fastq.gz 8.8 GB
EGAF50000786300 fastq.gz 1.8 GB
EGAF50000786301 fastq.gz 16.5 GB
EGAF50000786302 fastq.gz 4.3 GB
EGAF50000786303 fastq.gz 13.0 GB
EGAF50000786304 fastq.gz 3.3 GB
EGAF50000786305 fastq.gz 12.2 GB
EGAF50000786306 fastq.gz 3.1 GB
EGAF50000786307 fastq.gz 12.8 GB
EGAF50000786308 fastq.gz 3.0 GB
EGAF50000786309 fastq.gz 797.6 MB
EGAF50000786310 fastq.gz 3.1 GB
EGAF50000786311 fastq.gz 2.1 GB
EGAF50000786312 fastq.gz 2.8 GB
EGAF50000786313 fastq.gz 12.9 GB
EGAF50000786314 fastq.gz 3.0 GB
EGAF50000786315 fastq.gz 13.3 GB
EGAF50000786316 fastq.gz 11.5 GB
EGAF50000786317 fastq.gz 2.9 GB
EGAF50000786318 fastq.gz 16.9 GB
EGAF50000786319 fastq.gz 4.2 GB
EGAF50000786320 fastq.gz 12.9 GB
EGAF50000786321 fastq.gz 3.2 GB
EGAF50000786322 fastq.gz 3.5 GB
EGAF50000786323 fastq.gz 11.9 GB
EGAF50000786324 fastq.gz 3.0 GB
EGAF50000786325 fastq.gz 12.5 GB
EGAF50000786326 fastq.gz 3.1 GB
EGAF50000786327 fastq.gz 18.7 GB
EGAF50000786328 fastq.gz 4.7 GB
EGAF50000786329 fastq.gz 13.0 GB
EGAF50000786330 fastq.gz 12.4 GB
EGAF50000786331 fastq.gz 11.2 GB
EGAF50000786332 fastq.gz 2.9 GB
EGAF50000786333 fastq.gz 12.1 GB
EGAF50000786334 fastq.gz 13.0 GB
EGAF50000786335 fastq.gz 3.3 GB
EGAF50000786336 fastq.gz 14.1 GB
EGAF50000786337 fastq.gz 10.4 GB
EGAF50000786338 fastq.gz 2.6 GB
EGAF50000786339 fastq.gz 7.6 GB
EGAF50000786340 fastq.gz 5.2 GB
EGAF50000786341 fastq.gz 1.4 GB
EGAF50000786342 fastq.gz 5.5 GB
EGAF50000786343 fastq.gz 7.6 GB
EGAF50000786344 fastq.gz 1.9 GB
EGAF50000786345 fastq.gz 3.9 GB
EGAF50000786346 fastq.gz 1.0 GB
EGAF50000786347 fastq.gz 4.1 GB
EGAF50000786348 fastq.gz 8.1 GB
EGAF50000786349 fastq.gz 8.2 GB
EGAF50000786350 fastq.gz 5.6 GB
EGAF50000786351 fastq.gz 1.4 GB
EGAF50000786352 fastq.gz 5.9 GB
EGAF50000786353 fastq.gz 6.8 GB
EGAF50000786354 fastq.gz 1.3 GB
EGAF50000786355 fastq.gz 359.7 MB
EGAF50000786356 fastq.gz 5.1 GB
EGAF50000786357 fastq.gz 1.6 GB
EGAF50000786358 fastq.gz 7.1 GB
EGAF50000786359 fastq.gz 5.5 GB
EGAF50000786360 fastq.gz 1.4 GB
EGAF50000786361 fastq.gz 1.9 GB
EGAF50000786362 fastq.gz 5.6 GB
EGAF50000786363 fastq.gz 2.3 GB
EGAF50000786364 fastq.gz 8.5 GB
EGAF50000786365 fastq.gz 5.1 GB
EGAF50000786366 fastq.gz 13.8 GB
EGAF50000786367 fastq.gz 7.7 GB
EGAF50000786381 fastq.gz 11.9 GB
EGAF50000786382 fastq.gz 12.6 GB
EGAF50000786383 fastq.gz 3.2 GB
EGAF50000786384 fastq.gz 13.3 GB
EGAF50000786385 fastq.gz 12.1 GB
EGAF50000786386 fastq.gz 3.1 GB
EGAF50000786387 fastq.gz 12.8 GB
EGAF50000786388 fastq.gz 12.3 GB
EGAF50000786389 fastq.gz 3.1 GB
EGAF50000786390 fastq.gz 13.0 GB
EGAF50000786391 fastq.gz 11.7 GB
EGAF50000786392 fastq.gz 3.0 GB
EGAF50000786393 fastq.gz 12.6 GB
EGAF50000786394 fastq.gz 14.2 GB
EGAF50000786395 fastq.gz 3.6 GB
EGAF50000786396 fastq.gz 15.2 GB
EGAF50000786397 fastq.gz 13.7 GB
EGAF50000786398 fastq.gz 3.4 GB
EGAF50000786399 fastq.gz 1.7 GB
EGAF50000786400 fastq.gz 452.5 MB
EGAF50000786401 fastq.gz 1.7 GB
EGAF50000786402 fastq.gz 7.5 GB
EGAF50000786403 fastq.gz 1.9 GB
EGAF50000786404 fastq.gz 12.7 GB
EGAF50000786405 fastq.gz 3.2 GB
EGAF50000786406 fastq.gz 7.5 GB
EGAF50000786407 fastq.gz 4.6 GB
EGAF50000786408 fastq.gz 14.5 GB
EGAF50000786409 fastq.gz 12.0 GB
EGAF50000786410 fastq.gz 3.1 GB
EGAF50000786411 fastq.gz 14.7 GB
EGAF50000786412 fastq.gz 3.7 GB
EGAF50000786413 fastq.gz 13.4 GB
EGAF50000786414 fastq.gz 1.2 GB
EGAF50000786415 fastq.gz 4.8 GB
EGAF50000786416 fastq.gz 13.2 GB
EGAF50000786417 fastq.gz 3.3 GB
EGAF50000786418 fastq.gz 12.5 GB
EGAF50000786419 fastq.gz 14.1 GB
EGAF50000786420 fastq.gz 8.4 GB
EGAF50000786421 fastq.gz 2.1 GB
EGAF50000786422 fastq.gz 8.9 GB
EGAF50000786423 fastq.gz 15.9 GB
EGAF50000786424 fastq.gz 17.5 GB
EGAF50000786425 fastq.gz 13.5 GB
EGAF50000786426 fastq.gz 13.8 GB
EGAF50000786427 fastq.gz 14.2 GB
EGAF50000786428 fastq.gz 4.5 GB
EGAF50000786429 fastq.gz 6.7 GB
EGAF50000786430 fastq.gz 1.7 GB
EGAF50000786431 fastq.gz 3.4 GB
EGAF50000786432 fastq.gz 3.5 GB
EGAF50000786433 fastq.gz 12.3 GB
EGAF50000786434 fastq.gz 12.6 GB
EGAF50000786435 fastq.gz 6.8 GB
EGAF50000786436 fastq.gz 7.4 GB
EGAF50000786437 fastq.gz 14.3 GB
EGAF50000786438 fastq.gz 14.5 GB
EGAF50000786439 fastq.gz 3.1 GB
EGAF50000786440 fastq.gz 3.2 GB
EGAF50000786441 fastq.gz 14.7 GB
EGAF50000786442 fastq.gz 11.2 GB
EGAF50000786443 fastq.gz 18.7 GB
EGAF50000786444 fastq.gz 1.2 GB
EGAF50000786445 fastq.gz 315.2 MB
EGAF50000786446 fastq.gz 8.0 GB
EGAF50000786447 fastq.gz 5.2 GB
EGAF50000786448 fastq.gz 1.3 GB
EGAF50000786449 fastq.gz 5.4 GB
EGAF50000786450 fastq.gz 2.1 GB
EGAF50000786451 fastq.gz 11.1 GB
EGAF50000786452 fastq.gz 14.3 GB
EGAF50000786453 fastq.gz 3.6 GB
EGAF50000786454 fastq.gz 12.0 GB
EGAF50000786455 fastq.gz 16.4 GB
EGAF50000786456 fastq.gz 4.1 GB
EGAF50000786457 fastq.gz 7.7 GB
EGAF50000786458 fastq.gz 1.9 GB
EGAF50000786459 fastq.gz 8.1 GB
EGAF50000786460 fastq.gz 17.6 GB
EGAF50000786461 fastq.gz 8.3 GB
EGAF50000786462 fastq.gz 2.1 GB
EGAF50000786463 fastq.gz 7.8 GB
EGAF50000786464 fastq.gz 11.8 GB
EGAF50000786465 fastq.gz 12.6 GB
EGAF50000786466 fastq.gz 12.1 GB
EGAF50000786467 fastq.gz 17.3 GB
EGAF50000786468 fastq.gz 12.4 GB
EGAF50000786469 fastq.gz 15.1 GB
EGAF50000786470 fastq.gz 12.8 GB
EGAF50000786471 fastq.gz 8.4 GB
EGAF50000786472 fastq.gz 3.2 GB
EGAF50000786473 fastq.gz 12.0 GB
EGAF50000786474 fastq.gz 3.0 GB
EGAF50000786475 fastq.gz 13.6 GB
EGAF50000786476 fastq.gz 3.5 GB
EGAF50000786477 fastq.gz 11.1 GB
EGAF50000786478 fastq.gz 2.8 GB
EGAF50000786479 fastq.gz 11.6 GB
EGAF50000786480 fastq.gz 13.4 GB
EGAF50000786481 fastq.gz 13.0 GB
EGAF50000786482 fastq.gz 5.2 GB
EGAF50000786483 fastq.gz 1.4 GB
EGAF50000786484 fastq.gz 5.5 GB
EGAF50000786485 fastq.gz 14.6 GB
EGAF50000786486 fastq.gz 17.7 GB
EGAF50000786487 fastq.gz 19.9 GB
EGAF50000786488 fastq.gz 3.1 GB
EGAF50000786489 fastq.gz 13.3 GB
EGAF50000786636 fastq.gz 12.8 GB
EGAF50000786637 fastq.gz 3.2 GB
EGAF50000786638 fastq.gz 13.6 GB
EGAF50000786639 fastq.gz 13.0 GB
EGAF50000786640 fastq.gz 3.3 GB
EGAF50000786641 fastq.gz 13.7 GB
EGAF50000786642 fastq.gz 12.4 GB
EGAF50000786643 fastq.gz 3.2 GB
EGAF50000786644 fastq.gz 12.9 GB
EGAF50000786645 fastq.gz 16.8 GB
EGAF50000786646 fastq.gz 4.2 GB
EGAF50000786647 fastq.gz 17.9 GB
EGAF50000786648 fastq.gz 11.2 GB
EGAF50000786649 fastq.gz 2.9 GB
357 Files (2.4 TB)