RNA sequencing data of pediatric B-other acute lymphoblastic leukemia (set 2)
The dataset includes RNA sequencing FASTQ files from diagnostic tumor samples of three B-other ALL patients (ALLT-357, ALLT-361, ALLK-108). NEBNext Ultra Directional RNA Library Prep Kit (New England Biolabs) was used in library preparation, and Ribo-Zero Magnetic Kit (Illumina) was utilized in rRNA removal. The diagnostic tumor samples were sequenced using Illumina Novaseq 6000, and the target sequencing depth was 21 Gb.
- 18/05/2026
- 3 samples
- DAC: EGAC00001001551
- Technology: Illumina NovaSeq 6000
Two PIs (Tampere/Kuopio) and a legal representative of the Tampere University Hospital
Data will be shared if the proposed project falls within the patient/caretaker consent
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS50000001803 | RNASeq |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
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| EGAF50000808661 | fq.gz | 6.3 GB |
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| EGAF50000808662 | fq.gz | 7.7 GB |
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| EGAF50000808663 | fq.gz | 7.8 GB |
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| EGAF50000808684 | fq.gz | 6.2 GB |
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| EGAF50000808686 | fq.gz | 7.3 GB |
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| EGAF50000808702 | fq.gz | 7.5 GB |
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| 6 Files (42.8 GB) | ||||