About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Germline whole-genome sequencing (WGS) of colorectal cancer patients

Whole-genome sequencing (WGS) data generated from matched germline blood DNA samples obtained from patients with primary or metastatic colorectal adenocarcinoma (n=37). These data were generated as part of a multiomic study integrating whole-genome sequencing with single-cell multiome profiling to investigate recurrent epigenetic alterations in colorectal cancer evolution and the tumour microenvironment.

Request Access

Policy to access human data related to Livanova et al. paper submission

Access to this dataset is controlled by the EGAC50000001117 Committee Access may be granted to qualified researchers conducting bona fide scientific research consistent with the informed consent of the study participants, applicable ethics approvals, and the approved research purpose. Applicants must provide a description of the proposed research, institutional affiliation, names of all individuals requiring access, the requested dataset, and information on the secure computing environment in which the data will be processed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000002048 Epigenetics

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000945131 fastq.gz 7.1 GB
EGAF50000945132 fastq.gz 8.5 GB
EGAF50000945133 fastq.gz 8.4 GB
EGAF50000945134 fastq.gz 8.6 GB
EGAF50000945135 fastq.gz 9.0 GB
EGAF50000945145 fastq.gz 3.8 GB
EGAF50000945146 fastq.gz 6.1 GB
EGAF50000945147 fastq.gz 4.0 GB
EGAF50000945148 fastq.gz 3.8 GB
EGAF50000945149 fastq.gz 4.0 GB
EGAF50000945150 fastq.gz 6.0 GB
EGAF50000945151 fastq.gz 6.4 GB
EGAF50000945152 fastq.gz 5.4 GB
EGAF50000945153 fastq.gz 5.6 GB
EGAF50000945154 fastq.gz 5.6 GB
EGAF50000945155 fastq.gz 5.3 GB
EGAF50000945156 fastq.gz 5.6 GB
EGAF50000945157 fastq.gz 5.4 GB
EGAF50000945158 fastq.gz 5.4 GB
EGAF50000945159 fastq.gz 5.6 GB
EGAF50000945160 fastq.gz 5.4 GB
EGAF50000945161 fastq.gz 2.0 GB
EGAF50000945162 fastq.gz 2.1 GB
EGAF50000945163 fastq.gz 6.5 GB
EGAF50000945164 fastq.gz 6.8 GB
EGAF50000945165 fastq.gz 6.6 GB
EGAF50000945166 fastq.gz 6.5 GB
EGAF50000945167 fastq.gz 6.8 GB
EGAF50000945168 fastq.gz 6.6 GB
EGAF50000945169 fastq.gz 1.5 GB
EGAF50000945170 fastq.gz 1.5 GB
EGAF50000945171 fastq.gz 1.5 GB
EGAF50000945172 fastq.gz 1.5 GB
EGAF50000945173 fastq.gz 253.5 MB
EGAF50000945174 fastq.gz 253.9 MB
EGAF50000945175 fastq.gz 253.5 MB
EGAF50000945176 fastq.gz 6.6 GB
EGAF50000945177 fastq.gz 253.1 MB
EGAF50000945178 fastq.gz 1.5 GB
EGAF50000945179 fastq.gz 1.5 GB
EGAF50000945180 fastq.gz 1.5 GB
EGAF50000945181 fastq.gz 1.5 GB
EGAF50000945182 fastq.gz 254.7 MB
EGAF50000945183 fastq.gz 1.5 GB
EGAF50000945184 fastq.gz 1.5 GB
EGAF50000945185 fastq.gz 1.5 GB
EGAF50000945186 fastq.gz 3.3 GB
EGAF50000945187 fastq.gz 3.4 GB
EGAF50000945188 fastq.gz 3.9 GB
EGAF50000945189 fastq.gz 644.9 MB
EGAF50000945190 fastq.gz 4.1 GB
EGAF50000945191 fastq.gz 644.8 MB
EGAF50000945192 fastq.gz 3.9 GB
EGAF50000945193 fastq.gz 10.9 GB
EGAF50000945194 fastq.gz 10.3 GB
EGAF50000945195 fastq.gz 10.3 GB
EGAF50000945196 fastq.gz 10.2 GB
EGAF50000945197 fastq.gz 9.5 GB
EGAF50000945198 fastq.gz 8.6 GB
EGAF50000945199 fastq.gz 8.3 GB
EGAF50000945200 fastq.gz 6.6 GB
EGAF50000945201 fastq.gz 6.3 GB
EGAF50000945202 fastq.gz 8.2 GB
EGAF50000945203 fastq.gz 8.3 GB
EGAF50000945204 fastq.gz 8.4 GB
EGAF50000945205 fastq.gz 8.5 GB
EGAF50000945206 fastq.gz 13.0 GB
EGAF50000945207 fastq.gz 10.9 GB
EGAF50000945208 fastq.gz 13.2 GB
EGAF50000945209 fastq.gz 12.2 GB
EGAF50000945210 fastq.gz 13.1 GB
EGAF50000945211 fastq.gz 8.1 GB
EGAF50000945212 fastq.gz 8.3 GB
EGAF50000945213 fastq.gz 8.8 GB
EGAF50000945214 fastq.gz 8.8 GB
EGAF50000945215 fastq.gz 8.6 GB
EGAF50000945216 fastq.gz 6.2 GB
EGAF50000945217 fastq.gz 6.9 GB
EGAF50000945218 fastq.gz 6.6 GB
EGAF50000945219 fastq.gz 7.1 GB
EGAF50000945220 fastq.gz 6.5 GB
EGAF50000945221 fastq.gz 7.0 GB
EGAF50000945222 fastq.gz 13.4 GB
EGAF50000945223 fastq.gz 8.7 GB
EGAF50000945224 fastq.gz 8.8 GB
EGAF50000945225 fastq.gz 5.8 GB
EGAF50000945226 fastq.gz 5.9 GB
EGAF50000945227 fastq.gz 5.9 GB
EGAF50000945228 fastq.gz 5.9 GB
EGAF50000945229 fastq.gz 6.8 GB
EGAF50000945230 fastq.gz 9.6 GB
EGAF50000945231 fastq.gz 9.7 GB
EGAF50000945232 fastq.gz 6.2 GB
EGAF50000945233 fastq.gz 6.0 GB
EGAF50000945234 fastq.gz 6.3 GB
EGAF50000945235 fastq.gz 6.3 GB
EGAF50000945236 fastq.gz 9.1 GB
EGAF50000945237 fastq.gz 9.8 GB
EGAF50000945238 fastq.gz 9.2 GB
EGAF50000945239 fastq.gz 7.3 GB
EGAF50000945240 fastq.gz 6.9 GB
EGAF50000945241 fastq.gz 7.4 GB
EGAF50000945242 fastq.gz 6.7 GB
EGAF50000945243 fastq.gz 6.4 GB
EGAF50000945244 fastq.gz 8.6 GB
EGAF50000945245 fastq.gz 8.9 GB
EGAF50000945246 fastq.gz 9.0 GB
EGAF50000945247 fastq.gz 7.0 GB
EGAF50000945248 fastq.gz 7.0 GB
EGAF50000945249 fastq.gz 6.9 GB
EGAF50000945250 fastq.gz 6.9 GB
EGAF50000945251 fastq.gz 7.0 GB
EGAF50000945252 fastq.gz 9.3 GB
EGAF50000945253 fastq.gz 6.9 GB
EGAF50000945254 fastq.gz 7.1 GB
EGAF50000945255 fastq.gz 4.4 GB
EGAF50000945256 fastq.gz 4.5 GB
EGAF50000945257 fastq.gz 8.1 GB
EGAF50000945258 fastq.gz 255.6 MB
EGAF50000945259 fastq.gz 4.7 GB
EGAF50000945260 fastq.gz 3.9 GB
EGAF50000945261 fastq.gz 6.6 GB
EGAF50000945262 fastq.gz 6.0 GB
EGAF50000945263 fastq.gz 5.5 GB
EGAF50000945264 fastq.gz 7.5 GB
EGAF50000945265 fastq.gz 1.9 GB
EGAF50000945266 fastq.gz 8.7 GB
EGAF50000945267 fastq.gz 8.3 GB
EGAF50000945268 fastq.gz 9.0 GB
EGAF50000945269 fastq.gz 8.7 GB
EGAF50000945270 fastq.gz 6.6 GB
EGAF50000945271 fastq.gz 6.8 GB
EGAF50000945272 fastq.gz 6.6 GB
EGAF50000945273 fastq.gz 6.6 GB
EGAF50000945274 fastq.gz 11.1 GB
EGAF50000945275 fastq.gz 8.3 GB
EGAF50000945276 fastq.gz 11.0 GB
EGAF50000945277 fastq.gz 5.6 GB
EGAF50000945278 fastq.gz 1.5 GB
EGAF50000945279 fastq.gz 1.5 GB
EGAF50000945280 fastq.gz 4.1 GB
EGAF50000945281 fastq.gz 649.3 MB
EGAF50000945282 fastq.gz 645.5 MB
EGAF50000945283 fastq.gz 7.7 GB
EGAF50000945284 fastq.gz 10.9 GB
EGAF50000945285 fastq.gz 8.3 GB
EGAF50000945286 fastq.gz 8.7 GB
EGAF50000945287 fastq.gz 3.9 GB
EGAF50000945288 fastq.gz 9.5 GB
EGAF50000945289 fastq.gz 6.3 GB
EGAF50000945290 fastq.gz 6.7 GB
EGAF50000945665 fastq.gz 1.9 GB
EGAF50000945666 fastq.gz 2.0 GB
EGAF50000945667 fastq.gz 2.0 GB
EGAF50000946302 fastq.gz 10.9 GB
EGAF50000946303 fastq.gz 10.2 GB
EGAF50000946304 fastq.gz 10.8 GB
EGAF50000946305 fastq.gz 10.7 GB
EGAF50000946306 fastq.gz 10.8 GB
EGAF50000946307 fastq.gz 10.7 GB
EGAF50000946308 fastq.gz 10.8 GB
EGAF50000946309 fastq.gz 10.7 GB
EGAF50000946310 fastq.gz 11.0 GB
EGAF50000946311 fastq.gz 10.9 GB
EGAF50000946312 fastq.gz 5.4 GB
EGAF50000946313 fastq.gz 5.6 GB
EGAF50000946314 fastq.gz 7.0 GB
EGAF50000946315 fastq.gz 7.0 GB
EGAF50000946316 fastq.gz 1.5 GB
EGAF50000946317 fastq.gz 1.5 GB
EGAF50000946318 fastq.gz 251.5 MB
EGAF50000946319 fastq.gz 257.2 MB
EGAF50000946320 fastq.gz 1.6 GB
EGAF50000946321 fastq.gz 551.3 MB
EGAF50000946322 fastq.gz 4.1 GB
EGAF50000946323 fastq.gz 647.3 MB
EGAF50000946324 fastq.gz 3.9 GB
EGAF50000946325 fastq.gz 4.1 GB
EGAF50000946326 fastq.gz 3.9 GB
EGAF50000946327 fastq.gz 4.1 GB
EGAF50000946328 fastq.gz 3.9 GB
EGAF50000946329 fastq.gz 645.0 MB
EGAF50000946330 fastq.gz 4.1 GB
EGAF50000946331 fastq.gz 9.6 GB
EGAF50000946332 fastq.gz 9.1 GB
EGAF50000946333 fastq.gz 9.4 GB
EGAF50000946334 fastq.gz 9.0 GB
EGAF50000946335 fastq.gz 9.4 GB
EGAF50000946336 fastq.gz 9.2 GB
EGAF50000946337 fastq.gz 9.3 GB
EGAF50000946338 fastq.gz 9.6 GB
EGAF50000946339 fastq.gz 9.1 GB
EGAF50000946340 fastq.gz 9.4 GB
EGAF50000946341 fastq.gz 9.1 GB
EGAF50000946342 fastq.gz 9.4 GB
EGAF50000946343 fastq.gz 7.3 GB
EGAF50000946344 fastq.gz 7.0 GB
EGAF50000946345 fastq.gz 6.7 GB
EGAF50000946346 fastq.gz 7.1 GB
EGAF50000946347 fastq.gz 6.8 GB
EGAF50000946348 fastq.gz 7.1 GB
EGAF50000946349 fastq.gz 7.6 GB
EGAF50000946350 fastq.gz 7.2 GB
EGAF50000946351 fastq.gz 7.5 GB
EGAF50000946352 fastq.gz 7.2 GB
EGAF50000946353 fastq.gz 4.7 GB
EGAF50000946354 fastq.gz 4.6 GB
EGAF50000946355 fastq.gz 4.8 GB
EGAF50000946356 fastq.gz 4.6 GB
EGAF50000946357 fastq.gz 4.8 GB
EGAF50000946358 fastq.gz 12.3 GB
EGAF50000946359 fastq.gz 12.4 GB
EGAF50000946360 fastq.gz 12.1 GB
EGAF50000946361 fastq.gz 6.0 GB
EGAF50000946362 fastq.gz 6.1 GB
EGAF50000946363 fastq.gz 6.3 GB
EGAF50000946364 fastq.gz 6.1 GB
EGAF50000946365 fastq.gz 6.3 GB
EGAF50000946366 fastq.gz 5.8 GB
EGAF50000946367 fastq.gz 6.1 GB
EGAF50000946368 fastq.gz 6.2 GB
EGAF50000946369 fastq.gz 5.9 GB
EGAF50000946370 fastq.gz 6.2 GB
EGAF50000946371 fastq.gz 6.0 GB
EGAF50000946372 fastq.gz 6.3 GB
EGAF50000946373 fastq.gz 2.4 GB
EGAF50000946374 fastq.gz 2.3 GB
EGAF50000946375 fastq.gz 8.6 GB
EGAF50000946376 fastq.gz 8.7 GB
EGAF50000946377 fastq.gz 7.5 GB
EGAF50000946378 fastq.gz 7.3 GB
EGAF50000946379 fastq.gz 7.4 GB
EGAF50000946380 fastq.gz 7.2 GB
EGAF50000946381 fastq.gz 7.5 GB
EGAF50000946382 fastq.gz 7.3 GB
EGAF50000946383 fastq.gz 7.5 GB
EGAF50000946384 fastq.gz 7.3 GB
EGAF50000946385 fastq.gz 9.2 GB
EGAF50000946386 fastq.gz 8.6 GB
EGAF50000946387 fastq.gz 9.2 GB
EGAF50000946388 fastq.gz 8.5 GB
EGAF50000946389 fastq.gz 9.1 GB
EGAF50000946390 fastq.gz 8.4 GB
EGAF50000946391 fastq.gz 9.1 GB
EGAF50000946392 fastq.gz 9.0 GB
EGAF50000946393 fastq.gz 9.8 GB
EGAF50000946394 fastq.gz 9.2 GB
EGAF50000946395 fastq.gz 5.5 GB
EGAF50000946396 fastq.gz 5.6 GB
EGAF50000946397 fastq.gz 5.6 GB
EGAF50000946398 fastq.gz 5.0 GB
EGAF50000946399 fastq.gz 5.3 GB
EGAF50000946400 fastq.gz 5.0 GB
EGAF50000946401 fastq.gz 5.3 GB
EGAF50000946402 fastq.gz 4.9 GB
EGAF50000946403 fastq.gz 5.1 GB
EGAF50000946404 fastq.gz 5.0 GB
EGAF50000946405 fastq.gz 5.2 GB
EGAF50000946406 fastq.gz 6.7 GB
EGAF50000946407 fastq.gz 6.8 GB
EGAF50000946408 fastq.gz 6.8 GB
EGAF50000946409 fastq.gz 6.8 GB
EGAF50000946410 fastq.gz 6.6 GB
EGAF50000946411 fastq.gz 2.5 GB
EGAF50000946412 fastq.gz 2.6 GB
EGAF50000946413 fastq.gz 8.7 GB
EGAF50000946414 fastq.gz 8.5 GB
EGAF50000946415 fastq.gz 8.9 GB
EGAF50000946416 fastq.gz 8.3 GB
EGAF50000946417 fastq.gz 8.6 GB
EGAF50000946418 fastq.gz 8.4 GB
EGAF50000946419 fastq.gz 8.8 GB
EGAF50000946420 fastq.gz 7.5 GB
EGAF50000946421 fastq.gz 7.0 GB
EGAF50000946422 fastq.gz 7.7 GB
EGAF50000946423 fastq.gz 7.2 GB
EGAF50000946424 fastq.gz 7.6 GB
EGAF50000946425 fastq.gz 7.1 GB
EGAF50000946426 fastq.gz 7.1 GB
EGAF50000946427 fastq.gz 6.9 GB
EGAF50000946428 fastq.gz 7.2 GB
EGAF50000946429 fastq.gz 7.0 GB
EGAF50000946430 fastq.gz 7.3 GB
EGAF50000946431 fastq.gz 6.8 GB
EGAF50000946432 fastq.gz 7.1 GB
EGAF50000946433 fastq.gz 6.9 GB
EGAF50000946434 fastq.gz 7.1 GB
EGAF50000946435 fastq.gz 8.3 GB
EGAF50000946436 fastq.gz 8.6 GB
EGAF50000946437 fastq.gz 8.3 GB
EGAF50000946438 fastq.gz 8.6 GB
EGAF50000946439 fastq.gz 8.2 GB
EGAF50000946440 fastq.gz 8.5 GB
EGAF50000946441 fastq.gz 8.2 GB
EGAF50000946442 fastq.gz 8.5 GB
EGAF50000946443 fastq.gz 5.7 GB
EGAF50000946444 fastq.gz 5.7 GB
EGAF50000946445 fastq.gz 5.7 GB
EGAF50000946446 fastq.gz 5.8 GB
EGAF50000946447 fastq.gz 5.7 GB
EGAF50000946448 fastq.gz 5.7 GB
EGAF50000946449 fastq.gz 5.8 GB
EGAF50000946450 fastq.gz 5.8 GB
EGAF50000946451 fastq.gz 7.3 GB
EGAF50000946452 fastq.gz 6.9 GB
EGAF50000946453 fastq.gz 7.5 GB
EGAF50000946454 fastq.gz 7.1 GB
EGAF50000946455 fastq.gz 7.6 GB
EGAF50000946456 fastq.gz 7.1 GB
EGAF50000946457 fastq.gz 7.5 GB
EGAF50000946458 fastq.gz 7.1 GB
EGAF50000946459 fastq.gz 7.6 GB
EGAF50000946460 fastq.gz 7.5 GB
EGAF50000946461 fastq.gz 7.5 GB
EGAF50000946462 fastq.gz 10.1 GB
EGAF50000946463 fastq.gz 10.9 GB
EGAF50000946464 fastq.gz 10.2 GB
EGAF50000946465 fastq.gz 11.1 GB
EGAF50000946466 fastq.gz 10.0 GB
EGAF50000946467 fastq.gz 10.8 GB
EGAF50000946468 fastq.gz 10.1 GB
EGAF50000946469 fastq.gz 8.5 GB
EGAF50000946470 fastq.gz 8.8 GB
EGAF50000946471 fastq.gz 8.6 GB
EGAF50000946472 fastq.gz 8.5 GB
EGAF50000946473 fastq.gz 4.0 GB
EGAF50000946474 fastq.gz 9.3 GB
EGAF50000946475 fastq.gz 9.1 GB
EGAF50000946476 fastq.gz 9.6 GB
EGAF50000946477 fastq.gz 9.3 GB
EGAF50000946478 fastq.gz 9.2 GB
EGAF50000946479 fastq.gz 9.4 GB
EGAF50000946480 fastq.gz 9.2 GB
EGAF50000946481 fastq.gz 6.3 GB
EGAF50000946482 fastq.gz 6.7 GB
EGAF50000946483 fastq.gz 6.6 GB
EGAF50000946484 fastq.gz 6.4 GB
EGAF50000946485 fastq.gz 8.1 GB
EGAF50000946486 fastq.gz 7.8 GB
EGAF50000946487 fastq.gz 8.3 GB
EGAF50000946488 fastq.gz 8.0 GB
EGAF50000946489 fastq.gz 8.2 GB
EGAF50000946490 fastq.gz 7.9 GB
EGAF50000946491 fastq.gz 8.1 GB
EGAF50000946492 fastq.gz 7.8 GB
EGAF50000946493 fastq.gz 8.7 GB
EGAF50000946494 fastq.gz 8.7 GB
EGAF50000946495 fastq.gz 6.6 GB
EGAF50000946496 fastq.gz 6.8 GB
EGAF50000946497 fastq.gz 6.8 GB
EGAF50000946498 fastq.gz 10.3 GB
EGAF50000946499 fastq.gz 10.2 GB
EGAF50000946500 fastq.gz 11.0 GB
EGAF50000946501 fastq.gz 10.2 GB
EGAF50000946502 fastq.gz 11.0 GB
EGAF50000946503 fastq.gz 10.0 GB
EGAF50000946504 fastq.gz 10.7 GB
EGAF50000946505 fastq.gz 645.8 MB
EGAF50000946506 fastq.gz 4.1 GB
EGAF50000946507 fastq.gz 3.9 GB
360 Files (2.5 TB)