About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
Need Help?

Long-read whole-genome and Hi-C sequencing of 19 Korean individuals for the Korean Pangenome Reference

PacBio Revio HiFi long reads, Oxford Nanopore PromethION long reads, and Hi-C (Dovetail Omni-C, Illumina NovaSeq X) generated from 19 Korean individuals to construct the Korean Pangenome Reference (KPR). Twelve individuals were sequenced on PacBio Revio and seven on Oxford Nanopore PromethION; Hi-C data are available for two of the Revio-sequenced individuals, one of whom was also sequenced on PromethION. 22 runs in total.

Request Access

DUO:0000018
version: 2021-02-23

not for profit, non commercial use only

This data use modifier indicates that use of the data is limited to not-for-profit organizations and not-for-profit use, non-commercial use.

DUO:0000021
version: 2021-02-23

ethics approval required

This data use modifier indicates that the requestor must provide documentation of local IRB/ERB approval.

DUO:0000024
version: 2021-02-23

publication moratorium

This data use modifier indicates that requestor agrees not to publish results of studies until a specific date.

DUO:0000027
version: 2021-02-23

project specific restriction

This data use modifier indicates that use is limited to use within an approved project.

DUO:0000042
version: 2021-02-23

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

Korean Pangenome Reference (KPR) Data Access Policy

The KRIBB Genomic Medicine Research Center Data Access Committee (DAC) oversees access to and use of the genomic data generated for the Korean Pangenome Reference (KPR). These data comprise long-read whole-genome sequencing on the PacBio Revio and Oxford Nanopore PromethION platforms, together with Hi-C data, from 19 Korean individuals. Access is restricted to researchers conducting non-commercial, academic studies in health-related, biomedical or population-genomic research, including the development and benchmarking of analytical methods, consistent with the informed consent given by the research participants and with the approvals of the Institutional Review Boards of Chungnam National University Hospital (CNUH 2019-06-034) and Chungbuk National University Hospital (KRIBB P01-202503-02-002; CBNUH 2025-07-011). Applicants must submit a detailed research proposal, institutional ethics approval (IRB), and evidence of relevant expertise, and the applicant's institution must sign the Data Access Agreement before access is granted. All data accessed under this policy must be stored in secure environments, must not be shared with unauthorized third parties, and must not be used to identify individual research participants or their relatives, nor for forensic, law-enforcement, insurance, employment or marketing purposes. The data are provided strictly for the approved research project; any further use requires additional DAC approval. A publication moratorium applies: submission for publication should not occur until 12 months after these data were first made available, unless KRIBB has provided written consent to earlier submission. Results derived from these data must acknowledge the source study and cite the EGA study and dataset accession numbers. For inquiries or to request access, contact Jae-Yoon Kim (jaeyoonkim@kribb.re.kr).

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS50000002074 Whole Genome Sequencing

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF50000955199 fastq.gz 24.2 GB
EGAF50000955200 fastq.gz 23.8 GB
EGAF50000955201 fastq.gz 40.6 GB
EGAF50000955202 fastq.gz 41.9 GB
EGAF50000955203 fastq.gz 46.3 GB
EGAF50000955204 fastq.gz 46.4 GB
EGAF50000955205 fastq.gz 45.1 GB
EGAF50000955206 fastq.gz 55.5 GB
EGAF50000955207 fastq.gz 63.3 GB
EGAF50000955208 fastq.gz 51.5 GB
EGAF50000955209 fastq.gz 28.9 GB
EGAF50000955210 fastq.gz 29.2 GB
EGAF50000955211 fastq.gz 41.8 GB
EGAF50000955212 fastq.gz 44.1 GB
EGAF50000955213 fastq.gz 67.2 GB
EGAF50000955214 fastq.gz 49.2 GB
EGAF50000955215 fastq.gz 53.3 GB
EGAF50000955216 fastq.gz 87.1 GB
EGAF50000955217 fastq.gz 38.5 GB
EGAF50000955218 fastq.gz 59.4 GB
EGAF50000955219 fastq.gz 52.4 GB
EGAF50000955220 fastq.gz 37.9 GB
EGAF50000955221 fastq.gz 44.3 GB
EGAF50000955222 fastq.gz 68.6 GB
24 Files (1.1 TB)