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• Clinical utility of combined low-pass whole genome and targeted sequencing in liquid biopsies for diagnosis and monitoring of pediatric solid tumors

  We designed a liquid biopsy (LB) platform employing Low-Pass Whole Genome Sequencing (LP-WGS) and targeted sequencing of cell-free (cf) DNA isolated from plasma for detecting genome-wide copy number alterations and targeted gene fusions in pediatric solid tumors. A total of 143 plasma samples were analyzed from 19 controls (patients with non-oncologic diagnoses) and 73 patients, including 44 with bone or soft tissue sarcomas, 12 with renal tumors, 10 with germ cell tumors, 5 with hepatic tumors, and 2 with thyroid tumors.

  Study EGAS00001006913

• African Partnership for Chronic Disease Research (APCDR) DAC

  Dac EGAC00001000237

• cfDNA whole-genome TAPS data for cancer detection DAC

  80x whole-genome sequencing data from circulating tumour DNA pre-treated with TAPS from 91 patients

  Dac EGAC50000000440

• DAC for "Cross-species Comparison Reveals Therapeutic Vulnerabilities Halting Glioblastoma Progression" with Prof. Dr. Ana Martin-Villalba(a.martin-villalba@dkfz-heidelberg.de), Santiago Cerrizuela(s.cerrizuela@dkfz-heidelberg.de)

  Dac EGAC00001003564

• Clonotype Analysis Data

  This dataset includes: amplicon sequencing data for a total of 3 BCP-ALL patients - fastq files

  Dataset EGAD50000001518

• RNAseq for 190 AML patients

  This dataset contains 190 fastq files sequenced with Illumina HiSeq500.

  Dataset EGAD50000000490

• LOPEZ_2019.vcf.gz

  Genotype data for new samples in Lopez et al 2021

  Dataset EGAD00010002100

• HPAH Genotyping data

  Genotyping data for 32 individuals from a family affected by HPAH

  Dataset EGAD00010001633

• dataset_raw_NativesAmericans_LDGH_august2020

  Genome-wide data for 98 Native American individuals from Andes and Amazon

  Dataset EGAD00010001958

• README-for-EGAS00001004349-linking-HIPO-K09R-WGS-files

  Dataset EGAD00001006739