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• High-throughput 3D engineered paediatric tumour models for precision medicine

  Paired fastqs for DNA and RNA from Illumina TSO500 targeted sequencing from PDX.

  Dataset EGAD00001015753

• PACA-CA Whole Exome Sequence bam files

  Merged bam files for PACA-CA Whole Exome Sequencing, for DCC release 25

  Dataset EGAD00001003592

• RNASeq files for Roussel-ATRT-TM

  RNASeq files for Roussel-ATRT-TM paper titled "Atypical teratoid/ rhabdoid tumoroids reveal subgroup-specific drug vulnerabilities"

  Dataset EGAD00001009302

• McGill EMC Release 4 for assay "ChIP-Seq Input"

  McGill EMC Release 4 for assay "ChIP-Seq Input"

  Dataset EGAD00001001293

• Xenograph files for PCGP SJERG

  Additional Xenograph files for PCGP SJERG

  Dataset EGAD00001002741

• WXS files for Klco tMN data

  WXS files for paper titled "The Acquisition of Molecular Drivers in Pediatric Therapy-Related Myeloid Neoplasms"

  Dataset EGAD00001006675

• WGS files for Klco tMN data

  WGS files for paper titled "The Acquisition of Molecular Drivers in Pediatric Therapy-Related Myeloid Neoplasms"

  Dataset EGAD00001006676

• RNASeq files for Klco tMN data

  RNASeq files for paper titled "The Acquisition of Molecular Drivers in Pediatric Therapy-Related Myeloid Neoplasms"

  Dataset EGAD00001006674

• WGS_skin_punches

  We wish to understand the degree of copy number alterations in normal human sun exposed skin. We have collected small punches of epithelia and using a bait set design have shown the these span a clone. WGS will provide copy number information on these.

  Study EGAS00001004465

• WES data from tumors and matching controls collected from 11 UTSW translocation renal cell carcinoma (tRCC) patients.

  This study investigates translocation renal cell carcinoma (tRCC) to identify mutations contributing to tRCC progression. The analysis relies on Whole Exome Sequencing (WES) data obtained from 11 patients treated at University of Texas Southwestern Medical Center (UTSW) affiliated hospitals, including Parkland Hospital and Children’s Medical Center. Tumor samples and their corresponding normal DNA were sequenced using the Illumina platform.

  Dataset EGAD50000000171