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Type

dac dataset documentation study

Repository

dbgap ega jga

Study type

affected sib pairs aggregate genomic data atac sequencing cancer genomics case set case-cohort case-control clinical cohort clinical diagnostic testing clinical genetic testing clinical trial cohort collection control set controlled trial copy number variation (cnv) cross-sectional epigenetics eqtl exome sequencing family forensic or paleo-genomics full transcriptome sequencing gene regulation study genotype genotype/expression gwas hi-c individual-level genomic data interventional longitudinal longitudinal cohort marker discovery meta-analysis metagenomics metastasis methods development multi-omics data nested case-control nuclear families observational other parent-offspring parent-offspring trios partial factorial randomized population population genomics prospective randomized randomized controlled clinical trial reference set repertoire sequencing (tumor vs. matched-normal) resequencing rna sequencing rnaseq sequencing single cell analysis single cell rna sequencing synthetic genomics target capture sequencing target sequencing targeted capture sequence transcriptome analysis transcriptome sequencing transcriptome sequencing (tumor only) tumor tumor vs. matched-normal whole genome sequencing xenograft

Dataset types

amplicon sequencing chip-seq chromatin accessibility profiling by high-throughput sequencing exome sequencing genomic variant calling genotyping by array histone modification profiling by high-throughput sequencing methylation binding domain sequencing methylation profiling by high-throughput sequencing phenotype information study summary information transcriptome profiling by array transcriptome profiling by high-throughput sequencing whole genome sequencing

Dataset technologies

454 gs flx titanium ab 3730xl genetic analyzer ab 5500 genetic analyzer ab 5500xl genetic analyzer ab 5500xl-w genetic analysis system ab solid 4 system ab solid system abi_solid affymetrics_snp_6.0- affymetrix 6.0 array affymetrix snp 6.0 affymetrix snp6.0 affymetrix_snp6- agilent aperio aperio image - h&e stained tissue_section beadarray bgiseq-500 complete genomics cytoscan dnbseq-t7 epic beadchip (illumina, san diego, ca) exiqon 7th generation mircury lna microrna microarray system genechip human mapping 250k nspi genome-wide human snp array 6.0 - thermo fisher scientific gridion gsa-md v3 h and e image hiseq x five hiseq x ten illumina illumina 15k illumina 2.5m illumina 450k illumina 850k illumina cytosnp 12 bead array illumina genome analyzer illumina genome analyzer ii illumina genome analyzer iix illumina hiscan illumina hiseq 1500 illumina hiseq 2000 illumina hiseq 2000;illumina illumina hiseq 2500 illumina hiseq 3000 illumina hiseq 4000 illumina hiseq x illumina ht 12 illumina humanexome array illumina humanmethylationepic v1 illumina humanwg-6 illumina humanwg-6 version 3 or illumina humanht-12 expression bead chip, combined on identical nucleotide universal identifiers. illumina infinium human global screening array gsamd-24v2-0_20024620_a1 beadchip illumina infinium humanmethylation450k illumina infinium methylationepic 850k illumina infinium methylationepic beadchip (850 k) illumina methylationepic array illumina miseq illumina novaseq 6000 illumina novaseq x illumina oncoarray illuminahuman awg-6 and ht12 illuminahuman ht12 infinium methylationepic beadchip infinium methylationepic beadchip array infinium methylationepic v2.0 beadchip ion genestudio s5 prime ion torrent pgm ion torrent proton ion torrent s5 ion torrent s5 xl life tech - solid minion miseq nanostring nanostring cancer immune nanostring cancer pathway nanostring ncounterâ® pancancer io 360â„¢ nanostring panel nextseq 2000 nextseq 500 nextseq 550 novaseq 6000 oligonucleotide beads of humanht-12 v4 r2 expression beadchips (illumina) oncoscan pacbio rs pacbio rs ii promethion qexactive plus sequel snp array unspecified

Phenotypes

[CL:0000038] [CL:0000050] [CL:0000236] [CL:0000499] [CL:0000523] [CL:0000557] [CL:0000576] [CL:0000786] [CL:0000788] [CL:0000844] [CL:0000893] [CL:0000970] [CL:0000972] [CL:0001024] [CL:0001059] [CL:0002324] [CL:0002326] [CL:0002420] [CL:0002489] [CL:0002555] [CL:0010004] [CL:2000006] [EFO:0000094] [EFO:0000174] [EFO:0000182] [EFO:0000183] [EFO:0000196] [EFO:0000220] [EFO:0000222] [EFO:0000228] [EFO:0000239] [EFO:0000248] [EFO:0000292] [EFO:0000305] [EFO:0000308] [EFO:0000309] [EFO:0000310] [EFO:0000311] [EFO:0000312] [EFO:0000313] [EFO:0000314] [EFO:0000315] [EFO:0000316] [EFO:0000317] [EFO:0000318] [EFO:0000319] [EFO:0000320] [EFO:0000321] [EFO:0000322] [EFO:0000323] [EFO:0000324] [EFO:0000325] [EFO:0000326] [EFO:0000327] [EFO:0000328] [EFO:0000329] [EFO:0000330] [EFO:0000331] [EFO:0000332] [EFO:0000333] [EFO:0000334] [EFO:0000335] [EFO:0000336] [EFO:0000337] [EFO:0000338] [EFO:0000339] [EFO:0000340] [EFO:0000341] [EFO:0000342] [EFO:0000343] [EFO:0000344] [EFO:0000345] [EFO:0000346] [EFO:0000347] [EFO:0000348] [EFO:0000349] [EFO:0000350] [EFO:0000351] [EFO:0000352] [EFO:0000353] [EFO:0000354] [EFO:0000355] [EFO:0000356] [EFO:0000357] [EFO:0000358] [EFO:0000359] [EFO:0000360] [EFO:0000361] [EFO:0000362] [EFO:0000363] [EFO:0000364] [EFO:0000365] [EFO:0000366] [EFO:0000367] [EFO:0000368] [EFO:0000369] [EFO:0000370] [EFO:0000371] [EFO:0000372] [EFO:0000373] [EFO:0000374] [EFO:0000402] [EFO:0000403] [EFO:0000437] [EFO:0000502] [EFO:0000503] [EFO:0000519] [EFO:0000571] [EFO:0000616] [EFO:0000621] [EFO:0000637] [EFO:0000641] [EFO:0000681] [EFO:0000691] [EFO:0000693] [EFO:0000702] [EFO:0000708] [EFO:0000730] [EFO:0000756] [EFO:0000760] [EFO:0000761] [EFO:0000762] [EFO:0000848] [EFO:0000869] [EFO:0000887] [EFO:0000934] [EFO:0000973] [EFO:0000980] [EFO:0001071] [EFO:0001075] [EFO:0001376] [EFO:0001378] [EFO:0001461] [EFO:0001639] [EFO:0001663] [EFO:0002394] [EFO:0002422] [EFO:0002424] [EFO:0002618] [EFO:0002787] [EFO:0002793] [EFO:0002884] [EFO:0002885] [EFO:0002886] [EFO:0002887] [EFO:0002888] [EFO:0002889] [EFO:0002890] [EFO:0002891] [EFO:0002892] [EFO:0002916] [EFO:0002918] [EFO:0002939] [EFO:0003032] [EFO:0003060] [EFO:0003094] [EFO:0003137] [EFO:0003825] [EFO:0003897] [EFO:0003942] [EFO:0004422] [EFO:0004708] [EFO:0005235] [EFO:0005537] [EFO:0005543] [EFO:0005699] [EFO:0005701] [EFO:0005842] [EFO:0005844] [EFO:0006460] [EFO:0006545] [EFO:0006852] [EFO:0007143] [EFO:0007336] [EFO:0007365] [EFO:0007483] [EFO:0008498] [EFO:0008524] [EFO:0009052] [EFO:0009119] [EFO:0009120] [EFO:0009121] [EFO:0009375] [EFO:0009443] [EFO:0009654] [EFO:0009744] [EFO:0009907] [EFO:1000028] [EFO:1000042] [EFO:1000043] [EFO:1000069] [EFO:1000075] [EFO:1000101] [EFO:1000128] [EFO:1000138] [EFO:1000139] [EFO:1000144] [EFO:1000149] [EFO:1000231] [EFO:1000238] [EFO:1000288] [EFO:1000292] [EFO:1000307] [EFO:1000318] [EFO:1000348] [EFO:1000349] [EFO:1000360] [EFO:1000414] [EFO:1000416] [EFO:1000429] [EFO:1000453] [EFO:1000646] [EFO:1000796] [EFO:1001038] [EFO:1001100] [EFO:1001230] [EFO:1001480] [EFO:1001514] [EFO:1001515] [EFO:1001938] [EFO:1001946] [EFO:1001950] [EFO:1001951] [EFO:1001956] [EFO:1001958] [EFO:1001963] [EFO:1002008] [HP:0002716] [HP:0100880] [MONDO:0000430] [MONDO:0001056] [MONDO:0002397] [MONDO:0002601] [MONDO:0002627] [MONDO:0002630] [MONDO:0002631] [MONDO:0002678] [MONDO:0002924] [MONDO:0003002] [MONDO:0003142] [MONDO:0003537] [MONDO:0003572] [MONDO:0003751] [MONDO:0005575] [MONDO:0006058] [MONDO:0007254] [MONDO:0007255] [MONDO:0007256] [MONDO:0007257] [MONDO:0007258] [MONDO:0007259] [MONDO:0007260] [MONDO:0007261] [MONDO:0007262] [MONDO:0007263] [MONDO:0007264] [MONDO:0007265] [MONDO:0007266] [MONDO:0007267] [MONDO:0007268] [MONDO:0007269] [MONDO:0007270] [MONDO:0007271] [MONDO:0007272] [MONDO:0007273] [MONDO:0007274] [MONDO:0007275] [MONDO:0007276] [MONDO:0007277] [MONDO:0007278] [MONDO:0007279] [MONDO:0007280] [MONDO:0007281] [MONDO:0007282] [MONDO:0007283] [MONDO:0007284] [MONDO:0007285] [MONDO:0007286] [MONDO:0007287] [MONDO:0007288] [MONDO:0007289] [MONDO:0007290] [MONDO:0007291] [MONDO:0007292] [MONDO:0007293] [MONDO:0007294] [MONDO:0007295] [MONDO:0007296] [MONDO:0007297] [MONDO:0007298] [MONDO:0007299] [MONDO:0007300] [MONDO:0007301] [MONDO:0007302] [MONDO:0007303] [MONDO:0007304] [MONDO:0007305] [MONDO:0007306] [MONDO:0007307] [MONDO:0007308] [MONDO:0007309] [MONDO:0007310] [MONDO:0007311] [MONDO:0007312] [MONDO:0007313] [MONDO:0007314] [MONDO:0007315] [MONDO:0007316] [MONDO:0007317] [MONDO:0007318] [MONDO:0007319] [MONDO:0007320] [MONDO:0007321] [MONDO:0007322] [MONDO:0007323] [MONDO:0007324] [MONDO:0007325] [MONDO:0007326] [MONDO:0007327] [MONDO:0007328] [MONDO:0007329] [MONDO:0007330] [MONDO:0007331] [MONDO:0007332] [MONDO:0007333] [MONDO:0007334] [MONDO:0007335] [MONDO:0007336] [MONDO:0007337] [MONDO:0007338] [MONDO:0007339] [MONDO:0007340] [MONDO:0007341] [MONDO:0007342] [MONDO:0007343] [MONDO:0007344] [MONDO:0007345] [MONDO:0007346] [MONDO:0007347] [MONDO:0007348] [MONDO:0007349] [MONDO:0007350] [MONDO:0007351] [MONDO:0007352] [MONDO:0007353] [MONDO:0007354] [MONDO:0007355] [MONDO:0007356] [MONDO:0007357] [MONDO:0007358] [MONDO:0007359] [MONDO:0007360] [MONDO:0007361] [MONDO:0007362] [MONDO:0007363] [MONDO:0007364] [MONDO:0007365] [MONDO:0007366] [MONDO:0007367] [MONDO:0007368] [MONDO:0007369] [MONDO:0007370] [MONDO:0007371] [MONDO:0007372] [MONDO:0008170] [MONDO:0008903] [MONDO:0016690] [MONDO:0016691] [MONDO:0016692] [MONDO:0016700] [MONDO:0016735] [MONDO:0017349] [MONDO:0017387] [MONDO:0018177] [MONDO:0019457] [MONDO:0019474] [MONDO:0020511] [MONDO:0020580] [MONDO:0020663] [MONDO:0044335] [Orphanet:654] [PATO:0000461] [UBERON:0000178] [UBERON:0000310] [UBERON:0000397] [UBERON:0000992] [UBERON:0001134] [UBERON:0001156] [UBERON:0001159] [UBERON:0001968] [UBERON:0002046] [UBERON:0002328] [UBERON:0002371] [UBERON:0002372] [UBERON:0003889] [UBERON:0005351] [UBERON:0010393] [UBERON:0012168] [UBERON:0013756]

Duo

0000001 0000004 0000005 0000006 0000007 0000010 0000011 0000012 0000014 0000015 0000016 0000017 0000018 0000019 0000020 0000021 0000022 0000024 0000025 0000026 0000027 0000028 0000029 0000042 0000043 0000045 0000046

Domain

163 alchemab.com amc.seoul.kr amsterdamumc.nl aphp.fr bham.ac.uk bjmu.edu.cn bordet.be cam.ac.uk cancerresearch.my carrerasresearch.org catholic.ac.kr cc ccia.org.au cdfd.org.in cinn.es com crick.ac.uk cruk.cam.ac.uk cshs.org cuhk.edu.hk curie.fr dcu.ie dkfz duesseldorf.de duke embl.de erasmusmc.nl ewha.ac.kr ewhain.net fiu.edu garvan.org.au gene.com genome.rcast.u genomics.com gis.a gmail.com gumed.edu.pl gustaveroussy.fr hcancerbarretos.com.br hcuge.ch heidelberg.de heliogenomics.com hku.hk hoag.org hull.ac.uk i iarc.fr iconcologia.net icr.ac.uk igc.ed.ac.uk igmm.ed.ac.uk ikmb.uni ikp imperial.ac.uk incliva.es inserm.fr ircc.it irsicaixa.es irst.emr.it jax.org jh.edu jhmi.edu jhu.edu kcl.ac.uk ki.se kiel.de kreftregisteret.no kribb.re.kr leeds.ac.uk lists.cam.ac.uk livingcells.org ludwig.ox.ac.uk luebeck.de lyon.unicancer.fr mail.ubc.ca manchester.ac.uk marburg.de mcgill.ca mdanderson.org med.ac.at med.uni medisin.uio.no mednet.ucla.edu meduniwien.ac.at mochsl.org.br molgen.mpg.de mskcc.org ncc.go.jp ncc.re.kr nccs.com.sg nds.ox.ac.uk neurosurgery.ufl.edu njmu.edu.cn nki.nl northwestern.edu ntnu.no nus.edu.sg nygenome.org ohsu.edu oicr.on.ca petermac.org pgdx.com phsa.ca prostatecentre.com qimrberghofer.edu.au qmul.ac.uk qq.com radboudumc.nl reveal ri.ncgm.go.jp rmp.uhn.ca samsung.com scilifelab.se singhealth.com.sg sjtu.edu.cn skku.edu staff.uta.fi stanford.edu star.edu.sg stat.sinica.edu.tw stjude.org stuttgart.de sydney.edu.au tdi.org tgen.org tokyo.ac.jp tuni.fi uantwerpen.be ucalgary.ca ucl.ac.uk ucm.es ucsf.edu ugent.be uibk.ac.at uit.no ukr.de ulb.be umassmed.edu umcg.nl umin.ac.jp uni unibas.ch unimelb.edu.au unn.no unsw.edu.au uta.fi vestreviken.no vhebron.net vhio.net wrh.ox.ac.uk yale.edu yuhs.ac

6052 results for "canc*"

in 32.92 milliseconds.

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Domain

6052 results for "canc*"

in 32.92 milliseconds.

Genome and transcriptome sequence data from a metastatic squamous cell carcinoma of the cervix patient

Genome and transcriptome sequence data from a metastatic rectosigmoid cancer patient

Genome and transcriptome sequence data from a metastatic breast cancer patient

Genome and transcriptome sequence data from a double-hit lymphoma patient

Genome and transcriptome sequence data from a metastatic gastric cancer patient

Genome and transcriptome sequence data from a metastatic adenocarcinoma of the rectosigmoid patient

Genome and transcriptome sequence data from a leiomyosarcoma patient

Genome and transcriptome sequence data from a metastatic colon cancer patient

Genome and transcriptome sequence data from a clear cell carcinoma of the left ovary patient

Genome and transcriptome sequence data from a follicular lymphoma patient