22959 results for "ega"

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• RNA sequencing of Resistant BCC samples.

  RNA sequencing of Resistant BCC samples.

  Dataset EGAD00001000881

• nccRCC targeted exome sequencing of 375 genes

  Targeted exome sequencing of 375 genes

  Dataset EGAD00001001047

• McGill EMC Release 4 for assay "H3K27me3"

  McGill EMC Release 4 for assay "H3K27me3"

  Dataset EGAD00001001294

• Anaplastic Meningioma V3 cancer gene panel

  Investigation into causal genes underlying anaplastic meningioma

  Dataset EGAD00001001430

• Maastricht Irritable Bowel Syndrome metagenomic sequencing

  Metagenomic shotgun sequencing of Irritable bowel syndrome patients and matched controls

  Dataset EGAD00001002668

• SSBP1 sample

  The dataset includes exome sequencing results for a patient with SSBP1 mutations that cause a complex optic atrophy spectrum disorder

  Dataset EGAD00001005475

• Whole genome sequencing of EBV Associated Nasopharyngeal Carcinoma

  Whole genome sequencing of EBV Associated Nasopharyngeal Carcinoma

  Dataset EGAD00001006429

• INSPIRE Whole Exome Sequencing - Tumors

  INSPIRE whole exome sequencing of tumors updated

  Dataset EGAD00001006563

• Germline snv g.vcf for EGAS00001004572

  Bulk Germline snv vcfs from haplotypecaller analysis in EGAS00001004572

  Dataset EGAD00001006910

• dataset1

  Contains 4 clonal organoid samples + 1 bulk healthy tissue sample

  Dataset EGAD00001009485

• 108 WGS of epileptic patients from the CENet cohort

  Dataset is described in doi: https://doi.org/10.1101/2022.12.13.22283363

  Dataset EGAD00001011301

• DAC for study: "Combination pembrolizumab and radiotherapy induces systemic anti-tumor immune responses in immunologically-cold non-small cell lung cancer."

  This is Data Access Committee will oversee data sharing for sequence data in the EGA study: "Combination pembrolizumab and radiotherapy induces systemic anti-tumor immune responses in immunologically-cold non-small cell lung cancer." This dataset includes 116 bam files from whole exome sequencing on the Illumina HiSeq2500, 102 fastq files from RNA sequencing on the Illumina NovaSeq 6000. The samples analyzed include tumor/normal DNA samples and tumor RNA samples from 72 individuals with non-small cell lung cancer treated with pembrolizumab and SBRT or pembrolizumab alone on the NCT02492568 trial.

  Dac EGAC50000000202

• atrial appendage miRNA-seq in non-, paroxysmal and persistent atrial fibrillation

  64 left atrial appendages from patients without atrial fibrillation (AF) undergoing cardiac surgery, patients with paroxysmal AF and with persistent AF (~20 per group). Trizol RNA isolation, size selection, single end miRNA sequencing on 4 lanes of illumina NextSeq 500. Provided are FastQ files, one per lane per sample. Additional data (e.g. clinical characteristics, RIN values etc.) can be provided upon request. The same RNA samples (62) were used for transcriptome sequencing. Results from transcriptome sequencing are stored in the EGA database and are managed by the same DAC.

  Dataset EGAD00001007694

• Single cell sequencing of human normal breast myoepithelial cells

  The dataset includes 6 FASTQ files with single cell transcriptome sequencing data of normal breast myoepithelial cells from ducts and TDLUs derived from reduction mammoplasties from three patients. Chromium Single Cell 3’ Reagent Kit v2 or v3 (10x Genomics) were used for processing of cells, whereafter sequencing was performed using the Illumina® NextSeq500/550 High Output Kit v2. Cell Ranger was used for generating FASTQ files and files from different lanes were concatenated prior to uploading the data to EGA.

  Dataset EGAD00001008468

• Genetics of gene expression in primary human immune cells Data Access Committee

  Dac EGAC01000000009

• NB WGS 2015

  Dataset EGAD00001001687

• EGAD00010000238

  CLL Expression array

  Dataset EGAD00010000238

• EGAD00010000284

  NBS control samples only (Hap300)

  Dataset EGAD00010000284

• ICGC Germany PedBrain Medulloblastoma Pilot_2_LM

  ICGC Germany PedBrain Medulloblastoma Pilot_2_LM

  Dataset EGAD00001000027

• UK10K_NEURO_MUIR REL-2011-01-28

  UK10K_NEURO_MUIR REL-2011-01-28

  Dataset EGAD00001000052

• Renal Matched Pair Cell Line Exome Sequencing

  Renal Matched Pair Cell Line Exome Sequencing

  Dataset EGAD00001000100

• Acute Lymphoblastic Leukemia Sequencing

  Acute Lymphoblastic Leukemia Sequencing

  Dataset EGAD00001000116

• UK10K_NEURO_ASD_FI REL-2012-01-13

  UK10K_NEURO_ASD_FI REL-2012-01-13

  Dataset EGAD00001000173

• UK10K_NEURO_UKSCZ REL-2012-01-13

  UK10K_NEURO_UKSCZ REL-2012-01-13

  Dataset EGAD00001000182

• UK10K_OBESITY_SCOOP REL-2012-07-05

  EGAD00001000241_UK10K_OBESITY_SCOOP_REL_2012_07_05

  Dataset EGAD00001000241