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• Exome sequencing of short SGA children with IGF-I and insulin resistance

  Exome sequencing of short SGA children with IGF-I and insulin resistance. Collaboration with Professor David Dunger, University of Cambridge. Funded by NIHR.

  Dataset EGAD00001002208

• BAP1 sequence of uveal melanoma and mesothelioma samples

  Detection of BAP1 mutations in DNA from uveal melanoma and mesothelioma samples.

  Dataset EGAD00001002229

• 108 samples liver cancer and normal controls (54 pairs), whole exome sequencing

  liver cancer paired with normal controls, viral and non-viral origin

  Dataset EGAD00001006005

• whole genome sequencing of breast cancer cell lines and patient derived xenograft models

  whole genome sequencing of six commonly used breast cancer cell lines and six patient derived xenograft models

  Dataset EGAD00001008802

• smallRNA sequencing data from PAXgene blood from control and MCI individuals

  smallRNA sequencing from healthy individuals and MCI patients, along with phenotypic information.

  Dataset EGAD00001008153

• ADAPTeR Study: TCRseq data from ccRCC patients

  ADAPTeR study multi-region TCRseq of pre and post nivolumab tumour and PBMC samples

  Dataset EGAD00001008165

• Long non-coding RNA capture

  Capture lncRNA and totalRNA sequencing of various sample types (including plasma, FFPE and high quality RNA).

  Dataset EGAD00001007819

• Treated and control Patient Derived Xenografts of colorectal cancer (CRC) samples

  Bank of treateed and control PDXs metastastic colorectal cancer sample RNAseq

  Dataset EGAD00001010022

• ATAC-seq of cohesin-mutated and -wildtype adult AMLs

  ATAC-seq (Illumina TDE1 Transposase) to profile accessible chromatin regions of cohesin-mutated (STAG2 or RAD21 mutations) and -wildtype adult AMLs.

  Dataset EGAD00001011267

• WGS short read and 10X linked read sequencing of HR Deficient breast cancers

  A set of tumor/normal paired sequencing experiments, performed in short read WGS and 10X linked read whole genomes. BAM files aligned to hg19 are provided. Sample Alias number and Subject ID reflects patient of origin. T/N distinction discriminates between tumor and normal (peripheral blood) tissue.

  Dataset EGAD00001010326