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• EGYPT_HIGH_COVERAGE_vcf

  Integrated callset of high coverage Egyptian genomes from the Pagani et al. 2015 AJHG paper (doi: http://dx.doi.org/10.1016/j.ajhg.2015.04.019)

  Dataset EGAD00001003295

• mRNA-Seq dataset

  mRNA-Seq, HiSeq 2000 dataset of the Cell-line use case

  Dataset EGAD00001002250

• RCRF release 1

  Transcriptome sequencing from the Rare Cancer Research Foundation: leiomyosarcoma, large cell neuroendocrine carcinoma, clear cell carcinoma

  Dataset EGAD00001010198

• Paired-end Hi-C analysis of the 3D spatially mapped GBM samples.

  Dataset contains 21 paired-end Hi-C samples from 9 patients.

  Dataset EGAD00001010312

• Paired-end snATAC-seq analysis of the 3D spatially mapped GBM samples.

  Dataset contains 11 paired-end snATAC-seq samples from 4 patients.

  Dataset EGAD00001010313

• Chemosensitive Relapse in Small Cell Lung Cancer Patient-Derived Xenografts

  Genetic and epigenetic analysis of patient-derived xenograft models of acquired chemoresistance in small cell lung cancer.

  Study phs001249

• Multi-omic profiling of patient-derived pancreatic tumor organoids

  We conducted multi-omic profiling of patient-derived pancreatic cancer organoids and genetically engineered normal pancreas organoids.

  Study JGAS000719

• ExerFiber (Single muscle fiber exercise responses)

  Individual fibers of human skeletal muscle biopsies - collected immediately post-exercise and after 3h of recovery. m. vastus lateralis

  Study EGAS50000000419

• Long-read RNA sequencing of human normal liver organoid with or without SF3B4 overexpression

  Project aims to find alternative splicing events and resulting transcript isoforms modulated by SF3B4

  Study EGAS50000000849

• MBD4 targeted sequencing

  We sequenced a gene of interest, MBD4, in both germline (n=1099) and tumor (n=192) sample from Uveal Melanoma patients.

  Study EGAS00001005012