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• Whole exome sequencing of inflammatory bowel disease cases

  Whole exome sequencing of around 700 inflammatory bowel disease cases.This data can only be used for the identification of IBD/immune-mediated disease loci.

  Dataset EGAD00001001354

• Reference epigenome KNIH001 WGBS data generated from KEP study

  A KNIH001 Whole-Genome Bisulfite Sequencing(WGBS) paired end data for islet cells

  Dataset EGAD00001002749

• Reference epigenome KNIH002 WGBS data generated from KEP study

  A KNIH002 Whole-Genome Bisulfite Sequencing(WGBS) paired end data for islet cells

  Dataset EGAD00001002750

• Reference epigenome KNIH003 WGBS data generated from KEP study

  A KNIH003 Whole-Genome Bisulfite Sequencing(WGBS) paired end data for islet cells

  Dataset EGAD00001002751

• Reference epigenome KNIH004 WGBS data generated from KEP study

  A KNIH004 Whole-Genome Bisulfite Sequencing(WGBS) paired end data for islet cells

  Dataset EGAD00001002752

• Reference epigenome KNIH005 WGBS data generated from KEP study

  A KNIH005 Whole-Genome Bisulfite Sequencing(WGBS) paired end data for islet cells

  Dataset EGAD00001002753

• Reference epigenome KNIH006 WGBS data generated from KEP study

  A KNIH006 Whole-Genome Bisulfite Sequencing(WGBS) paired end data for beta cells

  Dataset EGAD00001002754

• Reference epigenome KNIH007 WGBS data generated from KEP study

  A KNIH007 Whole-Genome Bisulfite Sequencing(WGBS) paired end data for adipocytes

  Dataset EGAD00001002755

• Reference epigenome KNIH009 WGBS data generated from KEP study

  A KNIH009 Whole-Genome Bisulfite Sequencing(WGBS) paired end data for preadipocytes

  Dataset EGAD00001002757

• Whole Genome Sequencing of INTERVAL (2019-06-12)

  Whole genome sequencing of participants from the INTERVAL study. . This dataset contains all the data available for this study on 2019-06-12.

  Dataset EGAD00001005084

• Hyperpolarized 13C MRI in breast cancer

  Transcriptomics for samples obtained from six patients (MBR01, MBR03, MBR05, MBR07, MBR10, MBR11)

  Dataset EGAD00001005760

• Lund RNAseq data

  RNAsequencing data from human pancreatic islets from 191 donors, Lund University. Processed for the Inspire consortium.

  Dataset EGAD00001005512

• Neoantigen study samples for prostate cancer

  Whole exome sequencing and RNA sequencing data from 30 patients with prostate cancer.

  Dataset EGAD00001005713

• Glioblastoma stem cell lines RNA-seq

  RNA-seq data for three Glioblastoma stem cell (GSC) lines exposed to PRMT5 inhibitor and control samples.

  Dataset EGAD00001006095

• Single-nucleus RNA-sequencing of meningiomas

  Single-nucleus RNA-sequencing of meningiomas for integrative molecular classification

  Dataset EGAD00001007677

• Biomarker data

  Biomarker data for KATHERINE: Biomarker data include RNA-seq time point, Percent of tumor content, PAM50 subtypes, normalized gene expression of ERBB2, CD8 and CD274, normalized immune signature expression.

  Dataset EGAD00001008786

• Sputum metagenome for COPD patients and healthy controls

  This dataset contains the sputum metagenome from 99 COPD patients and 36 healthy individuals in China.

  Dataset EGAD00001009063

• liCHi-C Samples of B-ALL

  Libraries of liCHi-C for 2 B-ALL (B Acute Lymphocytic Leukaemia) from human patients. Fastq file format.

  Dataset EGAD00001008829

• KCL PRECSION lpWGS

  KCL lpWGS samples for copy number analysis

  Dataset EGAD00001008380

• 7 samples RNA-seq raw data

  Dataset comprising raw paired RNA-seq data in fastq.gz format for 7 samples of rosette forming brain tumors

  Dataset EGAD00001009265

• CYP2C19 long-read sequencing

  We have assessed the added value of long-read sequencing for PGx focusing on the clinically important and highly polymorphic CYP2C19 gene within 48 samples.

  Dataset EGAD00001009883

• Hi-C of cohesin-mutated and wildtype adult AMLs

  High-throughput chromosome conformation capture (Hi-C) data generated for cohesin-mutated (STAG2 or RAD21) and cohesin-wildtype AMLs.

  Dataset EGAD00001011198

• Extensive and differential platinum chemotherapy mutagenesis in livers of children - WGS cell lines

  Whole genome sequencing of HepG2 and THP-1 cell lines. They are untreated vehicle controls for the platinum experiment

  Dataset EGAD00001016141

• Inherited T Cell Defects: Diagnosis, Mechanisms and Treatments

  Infants with abnormal newborn screen results for severe combined immunodeficiency (SCID) and their parents were enrolled in UCSF IRB approved protocols with informed consent to have molecular and immunologic investigation to determine the cause of the infant's low T lymphocytes. Studies included exome sequencing of DNA from the infant and both parents. Candidate variants were investigated in mouse and zebrafish model organisms.

  Study phs002968

• Million Veteran Program (MVP) Summary Results from Non-Sensitive Omics Studies

  MVP is an ongoing prospective cohort study and mega‐biobank in the Department of Veterans Affairs Healthcare System designed to study genetic influences on health and disease among veterans. This is the accession to hold publicly available results. Results from sensitive phenotypes or MVP population subsets can be found at accession phs001672 and will require an application for access.

  Study phs002453