Study
Characterization of T cell tumor infiltration in brain metastases through the analysis of the cerebrospinal fluid
| Study ID | Alternative Stable ID | Type |
|---|---|---|
| EGAS00001004751 | Cancer Genomics |
Study Description
Study Datasets 3 datasets.
Click on a Dataset ID in the table below to learn more, and to find out who to contact about access to these data
| Dataset ID | Description | Technology | Samples |
|---|---|---|---|
| EGAD00001006451 |
A total of 9 brain metastasis were sequenced. For 6/9 a matched cerebrospinal fluid sample, prior to surgery and in two cases after surgery (+1 month from surgery) and after treatment (+3 month) were collected. Single-cell T cell receptor clonotypes were produced using the Chromium Single Cell 5’ Library and sequenced on an Illumina NovaSeq 6000.
|
Illumina NovaSeq 6000 | 17 |
| EGAD00001006452 |
A total of 9 brain metastasis were sequenced. For 6/9 a matched cerebrospinal fluid sample, prior to surgery and in two cases after surgery (+1 month from surgery) and after treatment (+3 month) were collected. Single-cell gene expression was produced using the Chromium Single Cell 5’ Library and sequenced on an Illumina NovaSeq 6000.
|
Illumina NovaSeq 6000 | 19 |
| EGAD00001006453 |
Whole exome sequencing of matched tumor (brain metastasis) -normal (blood) from 6 patients.
|
Illumina HiSeq 2500 | 12 |
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