Dataset

scRNA-seq from brain metastasis micorenvironment and cerebrospinal fluid

Dataset ID Technology Samples
EGAD00001006452 Illumina NovaSeq 6000 19

Dataset Description

A total of 9 brain metastasis were sequenced. For 6/9 a matched cerebrospinal fluid sample, prior to surgery and in two cases after surgery (+1 month from surgery) and after treatment (+3 month) were collected. Single-cell gene expression was produced using the Chromium Single Cell 5’ Library and sequenced on an Illumina NovaSeq 6000.

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

Gene expression and Cancer
Contact person: Joan Seoane
Email: jseoane [at] vhio [dot] net
More details: EGAC00001001772

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