DAC

Data Access Committee for Deciphering Developmental Disorders (DDD) Project

Dac ID Contact Person Email Access Information
EGAC00001000282 Data Sharing wtsidata1 [at] sanger [dot] ac [dot] uk No additional information is available

This DAC controls 18 datasets:

Dataset ID Description Technology Samples
EGAD00001001114 DDD DATAFREEZE 2013-12-18: 1133 trios - exome sequence BAM files (Ref: DDD Nature 2015) 3335
EGAD00001001355 DDD DATAFREEZE 2013-12-18: 1133 trios - VCF files (Ref: DDD Nature 2015) 3335
EGAD00001001413 DDD DATAFREEZE 2013-12-18: 1133 trios - README, family trios, phenotypes, validated DNMs (Ref: DDD Nature 2015) 3335
EGAD00001001848 DDD DATAFREEZE 2014-11-04: 4293 trios - VCF files 12539
EGAD00001001977 DDD DATAFREEZE 2014-11-04: 4293 trios - phenotypic and family descriptions 12539
EGAD00001002748 DDD DATAFREEZE 2014-11-04: 4293 trios - exome sequence CRAM files 12548
EGAD00001003340 DDD DATAFREEZE 2016-10-03: 7831 trios - VCF files 24664
EGAD00001003350 DDD DATAFREEZE 2016-10-03: 7831 trios - phenotypic and family descriptions 24667
EGAD00001003406 DDD DATAFREEZE 2016-10-03: 7831 trios - exome sequence CRAM files 24697
EGAD00001004388 DDD DATAFREEZE 2017-12-15: 13,462 trios and probands only - phenotypic and family descriptions 32230
EGAD00001004389 DDD DATAFREEZE 2017-12-15: 13,462 trios and probands only - exome sequence VCF files 32230
EGAD00001004390 DDD DATAFREEZE 2017-12-15: 13,462 trios and probands only - exome sequence CRAM files 32230
EGAD00010000702 SNP-chip genotyping data for one proband in the DDD study (Ref : Carvalho AJHG 2015) 1
EGAD00010001598 First batch of unfiltered raw data for N=3000 patients recruited to the DDD Study, genotyped on the Illumina Human CoreExome BeadChip. Illumina HumanCoreExome-24v1-0 3000
EGAD00010001600 Second batch of unfiltered raw data for N=3,000 patients recruited to the DDD Study, genotyped on the Illumina InfiniumCoreExome Beadchip. Illumina HumanCoreExome-24v1-1 8207
EGAD00010001602 Additional batch of unfiltered raw data for N=3,283 samples, including patients and parents recruited to the DDD Study, genotyped on the Illumina HumanOmniExpress BeadChip. Illumina SangerDDD_OmniExPlusv1_15019773 3822
EGAD00010001604 Post-QC (pre-imputation) data for N=6,987 DDD probands included in the neurodevelopmental disorder discovery GWAS (Niemi et al. 2018, biorxiv 309070). Illumina HumanCoreExome-24v1 6987
EGAD00010001606 Post-QC (pre-imputation) data for N=2,166 samples. These data consist of N=728 complete trios in which the proband has a neurodevelopmental phenotype (Niemi et al. 2018, biorxiv 309070). Illumina SangerDDD_OmniExPlusv1_15019773,MiSeq 2225