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DATA FILES FOR PCGP SJACT WGS

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DUO:0000042
version: 2019-01-07

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

DAC to obtain datasets submitted by St. Jude Children's Research Hospital - Washington University Pediatric Cancer Genome Project

Learn more about the PCGP, disease types, publications, the PCGP Data Access Committee, and instructions to access data via EGA: https://pecan.stjude.cloud/permalink/pcgp Complete the attached Data Access Agreement (DAA), adhering to the following guidance, and return it to pcgpdaccoordinator@stjude.org: - Requests must be made for individual datasets (EGAD ID), not full studies (EGAS ID). - A separate DAA must be submitted for each dataset AND all original pages must be included. - The first listed applicant should be the Principal Investigator, Head of Department, or Department Chair leading the project. This should not be a staff scientist or postdoctoral researcher. - The email address used to access the dataset(s) must be a work-related email, not a personal email. - The signature of the “Institutional or Administrative Authority” must be an individual with the authority to sign documents on behalf of the requesting institution. This individual is known as the Authorized Organizational Representative (AOR) and is typically someone in the requesting institution's legal department or grants office. Heads/Chairs of Departments cannot sign as the Institutional or Administrative Authority. - Not adhering to these policies will delay your application. Once we receive your completed application, the DAC review typically takes approximately 15-20 business days. - If we do not receive a completed DAA from you within 90 days, we will consider this application closed and reject your request in the EGA portal. You may resubmit later as needed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000257 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00000981269 bam 29.3 GB Report
EGAF00000993012 bam 29.1 GB Report
EGAF00000993013 bam 30.3 GB Report
EGAF00000993014 bam 18.8 GB Report
EGAF00000993015 bam 18.8 GB Report
EGAF00000993016 bam 23.5 GB Report
EGAF00000993017 bam 30.4 GB Report
EGAF00000993018 bam 22.8 GB Report
EGAF00000993019 bam 23.3 GB Report
EGAF00000993020 bam 9.4 GB Report
EGAF00000993021 bam 9.5 GB Report
EGAF00000993022 bam 9.4 GB Report
EGAF00000993023 bam 9.4 GB Report
EGAF00000993024 bam 21.5 GB Report
EGAF00000993025 bam 21.4 GB Report
EGAF00000993026 bam 21.0 GB Report
EGAF00000993027 bam 21.2 GB Report
EGAF00000993028 bam 11.4 GB Report
EGAF00000993029 bam 9.5 GB Report
EGAF00000993030 bam 12.9 GB Report
EGAF00000993031 bam 9.4 GB Report
EGAF00000993032 bam 13.0 GB Report
EGAF00000993033 bam 13.1 GB Report
EGAF00000993034 bam 11.1 GB Report
EGAF00000993035 bam 13.0 GB Report
EGAF00000993036 bam 22.7 GB Report
EGAF00000993037 bam 23.1 GB Report
EGAF00000993038 bam 23.2 GB Report
EGAF00000993039 bam 23.6 GB Report
EGAF00000993040 bam 12.0 GB Report
EGAF00000993041 bam 23.5 GB Report
EGAF00000993042 bam 26.9 GB Report
EGAF00000993043 bam 28.5 GB Report
EGAF00000993044 bam 22.6 GB Report
EGAF00000993045 bam 22.6 GB Report
EGAF00000993046 bam 27.2 GB Report
EGAF00000993047 bam 27.1 GB Report
EGAF00000993048 bam 27.3 GB Report
EGAF00000993049 bam 36.2 GB Report
EGAF00000993050 bam 36.5 GB Report
EGAF00000993051 bam 37.1 GB Report
EGAF00000993052 bam 18.8 GB Report
EGAF00000993053 bam 17.5 GB Report
EGAF00000993054 bam 17.8 GB Report
EGAF00000993055 bam 18.8 GB Report
EGAF00000993056 bam 24.9 GB Report
EGAF00000993057 bam 19.8 GB Report
EGAF00000993058 bam 20.6 GB Report
EGAF00000993059 bam 20.1 GB Report
EGAF00000993060 bam 28.0 GB Report
EGAF00000993061 bam 31.5 GB Report
EGAF00000993062 bam 31.9 GB Report
EGAF00000993063 bam 36.9 GB Report
EGAF00000993064 bam 37.0 GB Report
EGAF00000993065 bam 36.8 GB Report
EGAF00000993066 bam 31.0 GB Report
EGAF00000993067 bam 34.7 GB Report
EGAF00000993068 bam 36.7 GB Report
EGAF00000993069 bam 26.0 GB Report
EGAF00000993070 bam 28.5 GB Report
EGAF00000993071 bam 30.3 GB Report
EGAF00000993072 bam 30.1 GB Report
EGAF00000993073 bam 28.7 GB Report
EGAF00000993074 bam 27.5 GB Report
EGAF00000993075 bam 26.2 GB Report
EGAF00000993076 bam 26.9 GB Report
EGAF00000993077 bam 33.5 GB Report
EGAF00000993078 bam 33.8 GB Report
EGAF00000993079 bam 34.5 GB Report
EGAF00000993080 bam 34.3 GB Report
EGAF00000993081 bam 34.0 GB Report
EGAF00000993082 bam 20.8 GB Report
EGAF00000993083 bam 21.3 GB Report
EGAF00000993084 bam 23.3 GB Report
EGAF00000993085 bam 20.8 GB Report
75 Files (1.8 TB)