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Single cell mRNA sequencing of primary GBM - SF 10345

We collected fresh tissue from an untreated GBM (SF10345) directly from the operating room and subjected the biopsy to single-cell RNA-seq with the fluidigm C1 machine, resulting in sequencing libraries from 96 individual cells.

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UCSF Brain Tumor Bioinformatics Data Access Policy

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001001900 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Located in
EGAF00001270722 fastq.gz 116.2 MB
EGAF00001270723 fastq.gz 120.0 MB
EGAF00001270724 fastq.gz 152.3 MB
EGAF00001270725 fastq.gz 155.9 MB
EGAF00001270726 fastq.gz 100.3 MB
EGAF00001270727 fastq.gz 104.1 MB
EGAF00001270728 fastq.gz 84.3 MB
EGAF00001270729 fastq.gz 86.5 MB
EGAF00001270730 fastq.gz 117.4 MB
EGAF00001270731 fastq.gz 120.5 MB
EGAF00001270732 fastq.gz 87.3 MB
EGAF00001270733 fastq.gz 89.8 MB
EGAF00001270734 fastq.gz 74.0 MB
EGAF00001270735 fastq.gz 76.5 MB
EGAF00001270736 fastq.gz 111.2 MB
EGAF00001270737 fastq.gz 115.4 MB
EGAF00001270738 fastq.gz 63.0 MB
EGAF00001270739 fastq.gz 63.6 MB
EGAF00001270740 fastq.gz 112.7 MB
EGAF00001270741 fastq.gz 116.2 MB
EGAF00001270742 fastq.gz 81.5 MB
EGAF00001270743 fastq.gz 82.9 MB
EGAF00001270744 fastq.gz 77.1 MB
EGAF00001270745 fastq.gz 78.8 MB
EGAF00001270746 fastq.gz 358.0 kB
EGAF00001270747 fastq.gz 354.3 kB
EGAF00001270748 fastq.gz 75.4 MB
EGAF00001270749 fastq.gz 75.8 MB
EGAF00001270750 fastq.gz 59.3 MB
EGAF00001270751 fastq.gz 59.8 MB
EGAF00001270752 fastq.gz 90.2 MB
EGAF00001270753 fastq.gz 92.6 MB
EGAF00001270754 fastq.gz 158.0 MB
EGAF00001270755 fastq.gz 160.6 MB
EGAF00001270756 fastq.gz 94.2 MB
EGAF00001270757 fastq.gz 96.8 MB
EGAF00001270758 fastq.gz 161.1 MB
EGAF00001270759 fastq.gz 163.8 MB
EGAF00001270760 fastq.gz 51.7 MB
EGAF00001270761 fastq.gz 52.4 MB
EGAF00001270762 fastq.gz 116.7 MB
EGAF00001270763 fastq.gz 119.1 MB
EGAF00001270764 fastq.gz 100.6 MB
EGAF00001270765 fastq.gz 103.1 MB
EGAF00001270766 fastq.gz 104.5 MB
EGAF00001270767 fastq.gz 105.6 MB
EGAF00001270768 fastq.gz 143.5 MB
EGAF00001270769 fastq.gz 147.0 MB
EGAF00001270770 fastq.gz 147.9 MB
EGAF00001270771 fastq.gz 150.1 MB
EGAF00001270772 fastq.gz 140.2 MB
EGAF00001270773 fastq.gz 143.3 MB
EGAF00001270774 fastq.gz 107.1 MB
EGAF00001270775 fastq.gz 109.2 MB
EGAF00001270776 fastq.gz 139.7 MB
EGAF00001270777 fastq.gz 141.2 MB
EGAF00001270778 fastq.gz 75.3 MB
EGAF00001270779 fastq.gz 76.8 MB
EGAF00001270780 fastq.gz 73.7 MB
EGAF00001270781 fastq.gz 76.2 MB
EGAF00001270782 fastq.gz 98.9 MB
EGAF00001270783 fastq.gz 99.6 MB
EGAF00001270784 fastq.gz 49.4 MB
EGAF00001270785 fastq.gz 50.1 MB
EGAF00001270786 fastq.gz 38.8 MB
EGAF00001270787 fastq.gz 38.4 MB
EGAF00001270788 fastq.gz 105.7 MB
EGAF00001270789 fastq.gz 108.6 MB
EGAF00001270790 fastq.gz 150.0 MB
EGAF00001270791 fastq.gz 152.7 MB
EGAF00001270792 fastq.gz 137.1 MB
EGAF00001270793 fastq.gz 139.7 MB
EGAF00001270794 fastq.gz 125.0 MB
EGAF00001270795 fastq.gz 129.1 MB
EGAF00001270796 fastq.gz 97.8 MB
EGAF00001270797 fastq.gz 101.3 MB
EGAF00001270798 fastq.gz 122.8 MB
EGAF00001270799 fastq.gz 127.6 MB
EGAF00001270800 fastq.gz 94.2 MB
EGAF00001270801 fastq.gz 97.3 MB
EGAF00001270802 fastq.gz 44.4 MB
EGAF00001270803 fastq.gz 45.3 MB
EGAF00001270804 fastq.gz 38.2 MB
EGAF00001270805 fastq.gz 39.3 MB
EGAF00001270806 fastq.gz 48.1 MB
EGAF00001270807 fastq.gz 49.2 MB
EGAF00001270808 fastq.gz 133.0 MB
EGAF00001270809 fastq.gz 137.8 MB
EGAF00001270810 fastq.gz 103.0 MB
EGAF00001270811 fastq.gz 106.3 MB
EGAF00001270812 fastq.gz 135.8 MB
EGAF00001270813 fastq.gz 140.2 MB
EGAF00001270814 fastq.gz 36.4 MB
EGAF00001270815 fastq.gz 37.2 MB
EGAF00001270816 fastq.gz 53.2 MB
EGAF00001270817 fastq.gz 54.5 MB
EGAF00001270818 fastq.gz 150.6 MB
EGAF00001270819 fastq.gz 153.5 MB
EGAF00001270820 fastq.gz 51.9 MB
EGAF00001270821 fastq.gz 52.6 MB
EGAF00001270822 fastq.gz 116.2 MB
EGAF00001270823 fastq.gz 118.9 MB
EGAF00001270824 fastq.gz 137.0 MB
EGAF00001270825 fastq.gz 139.8 MB
EGAF00001270826 fastq.gz 161.4 MB
EGAF00001270827 fastq.gz 164.3 MB
EGAF00001270828 fastq.gz 148.3 MB
EGAF00001270829 fastq.gz 152.1 MB
EGAF00001270830 fastq.gz 163.6 MB
EGAF00001270831 fastq.gz 166.5 MB
EGAF00001270832 fastq.gz 76.4 MB
EGAF00001270833 fastq.gz 78.2 MB
EGAF00001270834 fastq.gz 76.0 MB
EGAF00001270835 fastq.gz 76.7 MB
EGAF00001270836 fastq.gz 104.5 MB
EGAF00001270837 fastq.gz 106.4 MB
EGAF00001270838 fastq.gz 180.6 MB
EGAF00001270839 fastq.gz 184.0 MB
EGAF00001270840 fastq.gz 75.6 MB
EGAF00001270841 fastq.gz 76.7 MB
EGAF00001270842 fastq.gz 139.8 MB
EGAF00001270843 fastq.gz 143.5 MB
EGAF00001270844 fastq.gz 56.5 MB
EGAF00001270845 fastq.gz 57.0 MB
EGAF00001270846 fastq.gz 57.8 MB
EGAF00001270847 fastq.gz 58.9 MB
EGAF00001270848 fastq.gz 87.9 MB
EGAF00001270849 fastq.gz 89.1 MB
EGAF00001270850 fastq.gz 157.7 MB
EGAF00001270851 fastq.gz 160.5 MB
EGAF00001270852 fastq.gz 126.1 MB
EGAF00001270853 fastq.gz 129.6 MB
EGAF00001270854 fastq.gz 57.5 MB
EGAF00001270855 fastq.gz 57.7 MB
EGAF00001270856 fastq.gz 156.8 MB
EGAF00001270857 fastq.gz 161.2 MB
EGAF00001270858 fastq.gz 92.1 MB
EGAF00001270859 fastq.gz 93.5 MB
EGAF00001270860 fastq.gz 84.6 MB
EGAF00001270861 fastq.gz 86.4 MB
EGAF00001270862 fastq.gz 147.3 MB
EGAF00001270863 fastq.gz 150.6 MB
EGAF00001270864 fastq.gz 96.1 MB
EGAF00001270865 fastq.gz 97.7 MB
EGAF00001271867 fastq.gz 153.7 MB
EGAF00001271868 fastq.gz 156.5 MB
EGAF00001271869 fastq.gz 94.9 MB
EGAF00001271870 fastq.gz 96.8 MB
EGAF00001271871 fastq.gz 51.3 MB
EGAF00001271872 fastq.gz 52.1 MB
EGAF00001271873 fastq.gz 122.5 MB
EGAF00001271874 fastq.gz 127.3 MB
EGAF00001271875 fastq.gz 150.0 MB
EGAF00001271876 fastq.gz 153.4 MB
EGAF00001271877 fastq.gz 164.6 MB
EGAF00001271878 fastq.gz 168.3 MB
EGAF00001271879 fastq.gz 136.0 MB
EGAF00001271880 fastq.gz 139.3 MB
EGAF00001271881 fastq.gz 83.2 MB
EGAF00001271882 fastq.gz 85.6 MB
EGAF00001271883 fastq.gz 76.6 MB
EGAF00001271884 fastq.gz 77.8 MB
EGAF00001271885 fastq.gz 126.3 MB
EGAF00001271886 fastq.gz 129.0 MB
EGAF00001271887 fastq.gz 100.4 MB
EGAF00001271888 fastq.gz 103.5 MB
EGAF00001271889 fastq.gz 70.1 MB
EGAF00001271890 fastq.gz 71.0 MB
EGAF00001271891 fastq.gz 49.5 MB
EGAF00001271892 fastq.gz 50.1 MB
EGAF00001271893 fastq.gz 71.6 MB
EGAF00001271894 fastq.gz 73.7 MB
EGAF00001271895 fastq.gz 143.3 MB
EGAF00001271896 fastq.gz 147.1 MB
EGAF00001271897 fastq.gz 141.9 MB
EGAF00001271898 fastq.gz 144.2 MB
EGAF00001271899 fastq.gz 105.4 MB
EGAF00001271900 fastq.gz 107.8 MB
EGAF00001271901 fastq.gz 148.8 MB
EGAF00001271902 fastq.gz 152.5 MB
EGAF00001271903 fastq.gz 149.6 MB
EGAF00001271904 fastq.gz 152.3 MB
EGAF00001271905 fastq.gz 142.1 MB
EGAF00001271906 fastq.gz 146.1 MB
EGAF00001271907 fastq.gz 51.9 MB
EGAF00001271908 fastq.gz 51.5 MB
EGAF00001271909 fastq.gz 108.8 MB
EGAF00001271910 fastq.gz 111.1 MB
EGAF00001271911 fastq.gz 134.2 MB
EGAF00001271912 fastq.gz 137.4 MB
EGAF00001271913 fastq.gz 114.9 MB
EGAF00001271914 fastq.gz 118.0 MB
192 Files (20.3 GB)