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Data files for PCGP SJACT WES

This dataset contains WES files for the SJACT cohort associated with the paper "Genetic landscape of pediatric Adrenocortical Tumor". In this paper, we analyse 37 adrenocortical tumours (ACTs) by whole-genome, whole-exome and/or transcriptome sequencing.

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DUO:0000042
version: 2019-01-07

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

DAC to obtain datasets submitted by St. Jude Children's Research Hospital - Washington University Pediatric Cancer Genome Project

Learn more about the PCGP, disease types, publications, the PCGP Data Access Committee, and instructions to access data via EGA: https://pecan.stjude.cloud/permalink/pcgp Complete the attached Data Access Agreement (DAA), adhering to the following guidance, and return it to pcgpdaccoordinator@stjude.org: - Requests must be made for individual datasets (EGAD ID), not full studies (EGAS ID). - A separate DAA must be submitted for each dataset AND all original pages must be included. - The first listed applicant should be the Principal Investigator, Head of Department, or Department Chair leading the project. This should not be a staff scientist or postdoctoral researcher. - The email address used to access the dataset(s) must be a work-related email, not a personal email. - The signature of the “Institutional or Administrative Authority” must be an individual with the authority to sign documents on behalf of the requesting institution. This individual is known as the Authorized Organizational Representative (AOR) and is typically someone in the requesting institution's legal department or grants office. Heads/Chairs of Departments cannot sign as the Institutional or Administrative Authority. - Not adhering to these policies will delay your application. Once we receive your completed application, the DAC review typically takes approximately 15-20 business days. - If we do not receive a completed DAA from you within 90 days, we will consider this application closed and reject your request in the EGA portal. You may resubmit later as needed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000257 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00000878752 bam 3.8 GB Report
EGAF00000878753 bam 3.6 GB Report
EGAF00000878754 bam 4.0 GB Report
EGAF00000878755 bam 3.1 GB Report
EGAF00000878756 bam 3.0 GB Report
EGAF00000878757 bam 3.4 GB Report
EGAF00000878758 bam 2.3 GB Report
EGAF00000878759 bam 2.3 GB Report
EGAF00000878760 bam 2.5 GB Report
EGAF00000878761 bam 3.3 GB Report
EGAF00000878762 bam 3.2 GB Report
EGAF00000878763 bam 3.9 GB Report
EGAF00000878764 bam 4.9 GB Report
EGAF00000878765 bam 4.7 GB Report
EGAF00000878766 bam 5.3 GB Report
EGAF00000878767 bam 3.5 GB Report
EGAF00000878768 bam 3.4 GB Report
EGAF00000878769 bam 3.5 GB Report
EGAF00000878770 bam 3.7 GB Report
EGAF00000878771 bam 4.5 GB Report
EGAF00000878772 bam 2.3 GB Report
EGAF00000878773 bam 3.4 GB Report
EGAF00000878774 bam 4.2 GB Report
EGAF00000878775 bam 2.3 GB Report
EGAF00000878776 bam 3.2 GB Report
EGAF00000878777 bam 4.1 GB Report
EGAF00000878778 bam 1.5 GB Report
EGAF00000878779 bam 3.9 GB Report
EGAF00000878780 bam 4.9 GB Report
EGAF00000878781 bam 2.7 GB Report
EGAF00000878782 bam 4.0 GB Report
EGAF00000878783 bam 5.0 GB Report
EGAF00000878784 bam 2.7 GB Report
EGAF00000878785 bam 4.1 GB Report
EGAF00000878786 bam 5.3 GB Report
EGAF00000878787 bam 2.5 GB Report
EGAF00000878788 bam 5.0 GB Report
EGAF00000878789 bam 4.9 GB Report
EGAF00000878790 bam 3.9 GB Report
EGAF00000878791 bam 3.8 GB Report
EGAF00000878792 bam 5.1 GB Report
EGAF00000878793 bam 4.9 GB Report
EGAF00000878794 bam 5.2 GB Report
EGAF00000878795 bam 5.1 GB Report
EGAF00000878796 bam 6.4 GB Report
EGAF00000878797 bam 6.3 GB Report
EGAF00000878798 bam 5.7 GB Report
EGAF00000878799 bam 5.5 GB Report
EGAF00000878800 bam 6.4 GB Report
EGAF00000878801 bam 6.3 GB Report
EGAF00000878802 bam 5.8 GB Report
EGAF00000878803 bam 5.7 GB Report
EGAF00000878804 bam 5.9 GB Report
EGAF00000878805 bam 5.8 GB Report
EGAF00000878806 bam 4.5 GB Report
EGAF00000878807 bam 4.5 GB Report
EGAF00000878808 bam 5.1 GB Report
EGAF00000878809 bam 5.0 GB Report
EGAF00000878810 bam 6.0 GB Report
EGAF00000878811 bam 5.9 GB Report
EGAF00000878812 bam 4.9 GB Report
EGAF00000878813 bam 4.9 GB Report
EGAF00000878814 bam 6.8 GB Report
EGAF00000878815 bam 6.8 GB Report
EGAF00000878816 bam 5.1 GB Report
EGAF00000878817 bam 4.9 GB Report
EGAF00000878818 bam 6.5 GB Report
EGAF00000878819 bam 6.6 GB Report
EGAF00000878820 bam 6.1 GB Report
EGAF00000878821 bam 6.2 GB Report
EGAF00000878822 bam 5.1 GB Report
EGAF00000878823 bam 4.9 GB Report
EGAF00000878824 bam 3.4 GB Report
EGAF00000878825 bam 2.8 GB Report
EGAF00000878826 bam 4.5 GB Report
EGAF00000878827 bam 3.7 GB Report
EGAF00000878828 bam 3.9 GB Report
EGAF00000878829 bam 3.1 GB Report
EGAF00000878830 bam 3.9 GB Report
EGAF00000878831 bam 3.2 GB Report
EGAF00000878832 bam 3.0 GB Report
EGAF00000878833 bam 2.5 GB Report
EGAF00000878834 bam 1.7 GB Report
EGAF00000878835 bam 1.4 GB Report
EGAF00000878836 bam 7.3 GB Report
EGAF00000878837 bam 7.4 GB Report
EGAF00000878838 bam 2.6 GB Report
EGAF00000878839 bam 6.2 GB Report
EGAF00000878840 bam 6.3 GB Report
EGAF00000878841 bam 2.0 GB Report
90 Files (394.7 GB)