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Data files for PCGP SJACT RNASEQ

This dataset contains RNA-Seq files for the SJACT cohort associated with the paper "Genetic landscape of pediatric Adrenocortical Tumor". In this paper, we analyse 37 adrenocortical tumours (ACTs) by whole-genome, whole-exome and/or transcriptome sequencing.

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DUO:0000042
version: 2019-01-07

general research use

This data use permission indicates that use is allowed for general research use for any research purpose.

DAC to obtain datasets submitted by St. Jude Children's Research Hospital - Washington University Pediatric Cancer Genome Project

Learn more about the PCGP, disease types, publications, the PCGP Data Access Committee, and instructions to access data via EGA: https://pecan.stjude.cloud/permalink/pcgp Complete the attached Data Access Agreement (DAA), adhering to the following guidance, and return it to pcgpdaccoordinator@stjude.org: - Requests must be made for individual datasets (EGAD ID), not full studies (EGAS ID). - A separate DAA must be submitted for each dataset AND all original pages must be included. - The first listed applicant should be the Principal Investigator, Head of Department, or Department Chair leading the project. This should not be a staff scientist or postdoctoral researcher. - The email address used to access the dataset(s) must be a work-related email, not a personal email. - The signature of the “Institutional or Administrative Authority” must be an individual with the authority to sign documents on behalf of the requesting institution. This individual is known as the Authorized Organizational Representative (AOR) and is typically someone in the requesting institution's legal department or grants office. Heads/Chairs of Departments cannot sign as the Institutional or Administrative Authority. - Not adhering to these policies will delay your application. Once we receive your completed application, the DAC review typically takes approximately 15-20 business days. - If we do not receive a completed DAA from you within 90 days, we will consider this application closed and reject your request in the EGA portal. You may resubmit later as needed.

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001000257 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
EGAF00001299111 bam 4.1 GB Report
EGAF00001299116 bam 2.5 GB Report
EGAF00001299124 bam 8.1 GB Report
EGAF00001299132 bam 3.0 GB Report
EGAF00001299133 bam 3.1 GB Report
EGAF00001299134 bam 3.3 GB Report
EGAF00001299135 bam 3.4 GB Report
EGAF00001299136 bam 3.0 GB Report
EGAF00001299137 bam 3.1 GB Report
EGAF00001299138 bam 4.2 GB Report
EGAF00001299139 bam 4.3 GB Report
EGAF00001299140 bam 3.5 GB Report
EGAF00001303949 bam 4.3 GB Report
EGAF00001308843 bam 4.1 GB Report
EGAF00001308845 bam 9.4 GB Report
EGAF00001308846 bam 8.7 GB Report
EGAF00001308847 bam 8.8 GB Report
EGAF00001308848 bam 9.0 GB Report
EGAF00001308850 bam 10.5 GB Report
EGAF00001308851 bam 10.3 GB Report
EGAF00001308852 bam 35.7 GB Report
EGAF00001308853 bam 7.1 GB Report
EGAF00001308854 bam 8.6 GB Report
EGAF00001308855 bam 9.0 GB Report
EGAF00001308856 bam 7.2 GB Report
EGAF00001308858 bam 8.3 GB Report
EGAF00001308859 bam 9.1 GB Report
EGAF00001308860 bam 6.6 GB Report
EGAF00001308861 bam 7.0 GB Report
EGAF00001308862 bam 6.5 GB Report
EGAF00001308863 bam 6.4 GB Report
EGAF00001308864 bam 9.4 GB Report
EGAF00001308874 bam 3.6 GB Report
EGAF00001308875 bam 4.2 GB Report
34 Files (239.3 GB)