About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Single cell mRNA sequencing of CD11b cells from a primary GBM - SF 10592i

We collected fresh tissue from an untreated GBM directly from the operating room and subjected the biopsy to single-cell RNA-seq with the fluidigm C1 machine after selection of CD11b+ cells using magnetic beads.

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UCSF Brain Tumor Bioinformatics Data Access Policy

Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002185 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00001420559 fastq.gz 334.3 MB Report
EGAF00001420560 fastq.gz 365.3 MB Report
EGAF00001420561 fastq.gz 132.2 MB Report
EGAF00001420562 fastq.gz 145.6 MB Report
EGAF00001420563 fastq.gz 241.7 MB Report
EGAF00001420564 fastq.gz 263.0 MB Report
EGAF00001420565 fastq.gz 1.1 MB Report
EGAF00001420566 fastq.gz 1.1 MB Report
EGAF00001420567 fastq.gz 5.1 MB Report
EGAF00001420568 fastq.gz 5.5 MB Report
EGAF00001420569 fastq.gz 37.6 MB Report
EGAF00001420570 fastq.gz 40.5 MB Report
EGAF00001420571 fastq.gz 711.5 kB Report
EGAF00001420572 fastq.gz 738.5 kB Report
EGAF00001420573 fastq.gz 207.4 MB Report
EGAF00001420574 fastq.gz 223.4 MB Report
EGAF00001420575 fastq.gz 1.0 MB Report
EGAF00001420576 fastq.gz 1.1 MB Report
EGAF00001420577 fastq.gz 161.2 MB Report
EGAF00001420578 fastq.gz 176.7 MB Report
EGAF00001420579 fastq.gz 1.4 MB Report
EGAF00001420580 fastq.gz 1.5 MB Report
EGAF00001420581 fastq.gz 203.5 MB Report
EGAF00001420582 fastq.gz 221.5 MB Report
EGAF00001420583 fastq.gz 331.4 MB Report
EGAF00001420584 fastq.gz 360.4 MB Report
EGAF00001420585 fastq.gz 31.8 MB Report
EGAF00001420586 fastq.gz 34.5 MB Report
EGAF00001420587 fastq.gz 333.2 MB Report
EGAF00001420588 fastq.gz 361.4 MB Report
EGAF00001420679 fastq.gz 978.0 kB Report
EGAF00001420680 fastq.gz 998.0 kB Report
EGAF00001420681 fastq.gz 41.8 MB Report
EGAF00001420682 fastq.gz 47.7 MB Report
EGAF00001420683 fastq.gz 129.2 MB Report
EGAF00001420684 fastq.gz 140.1 MB Report
EGAF00001420685 fastq.gz 13.7 MB Report
EGAF00001420686 fastq.gz 15.0 MB Report
EGAF00001420687 fastq.gz 59.5 MB Report
EGAF00001420688 fastq.gz 64.2 MB Report
EGAF00001420689 fastq.gz 42.5 MB Report
EGAF00001420690 fastq.gz 46.7 MB Report
EGAF00001420691 fastq.gz 77.4 MB Report
EGAF00001420692 fastq.gz 85.0 MB Report
EGAF00001420693 fastq.gz 74.1 MB Report
EGAF00001420694 fastq.gz 81.7 MB Report
EGAF00001420695 fastq.gz 325.7 MB Report
EGAF00001420696 fastq.gz 352.5 MB Report
EGAF00001420697 fastq.gz 333.9 MB Report
EGAF00001420698 fastq.gz 364.4 MB Report
EGAF00001420699 fastq.gz 125.1 MB Report
EGAF00001420700 fastq.gz 137.6 MB Report
EGAF00001420701 fastq.gz 1.0 MB Report
EGAF00001420702 fastq.gz 1.1 MB Report
EGAF00001420703 fastq.gz 225.4 MB Report
EGAF00001420704 fastq.gz 243.1 MB Report
EGAF00001420705 fastq.gz 68.4 MB Report
EGAF00001420706 fastq.gz 74.3 MB Report
EGAF00001420707 fastq.gz 43.7 MB Report
EGAF00001420708 fastq.gz 47.1 MB Report
EGAF00001420799 fastq.gz 151.2 MB Report
EGAF00001420800 fastq.gz 165.2 MB Report
EGAF00001420801 fastq.gz 236.9 MB Report
EGAF00001420802 fastq.gz 254.6 MB Report
EGAF00001420803 fastq.gz 334.4 MB Report
EGAF00001420804 fastq.gz 363.4 MB Report
EGAF00001420805 fastq.gz 127.7 MB Report
EGAF00001420806 fastq.gz 138.5 MB Report
EGAF00001420807 fastq.gz 2.2 MB Report
EGAF00001420808 fastq.gz 2.3 MB Report
EGAF00001420809 fastq.gz 8.2 MB Report
EGAF00001420810 fastq.gz 8.7 MB Report
EGAF00001420811 fastq.gz 32.9 MB Report
EGAF00001420812 fastq.gz 35.4 MB Report
EGAF00001420813 fastq.gz 17.4 MB Report
EGAF00001420814 fastq.gz 19.2 MB Report
EGAF00001420815 fastq.gz 332.0 MB Report
EGAF00001420816 fastq.gz 358.3 MB Report
EGAF00001420817 fastq.gz 5.9 MB Report
EGAF00001420818 fastq.gz 6.3 MB Report
EGAF00001420819 fastq.gz 227.9 MB Report
EGAF00001420820 fastq.gz 244.8 MB Report
EGAF00001420821 fastq.gz 175.3 MB Report
EGAF00001420822 fastq.gz 188.4 MB Report
EGAF00001420823 fastq.gz 260.8 MB Report
EGAF00001420824 fastq.gz 284.1 MB Report
EGAF00001420825 fastq.gz 10.7 MB Report
EGAF00001420826 fastq.gz 11.6 MB Report
EGAF00001420827 fastq.gz 334.7 MB Report
EGAF00001420828 fastq.gz 361.4 MB Report
EGAF00001420941 fastq.gz 37.2 MB Report
EGAF00001420942 fastq.gz 40.2 MB Report
EGAF00001420943 fastq.gz 10.4 MB Report
EGAF00001420944 fastq.gz 11.1 MB Report
EGAF00001421637 fastq.gz 884.0 kB Report
EGAF00001421638 fastq.gz 901.9 kB Report
EGAF00001421639 fastq.gz 931.8 kB Report
EGAF00001421640 fastq.gz 962.9 kB Report
EGAF00001421641 fastq.gz 7.8 MB Report
EGAF00001421642 fastq.gz 8.4 MB Report
EGAF00001421643 fastq.gz 784.2 kB Report
EGAF00001421644 fastq.gz 795.8 kB Report
EGAF00001421731 fastq.gz 1.3 MB Report
EGAF00001421732 fastq.gz 1.4 MB Report
EGAF00001421733 fastq.gz 2.0 MB Report
EGAF00001421734 fastq.gz 2.1 MB Report
EGAF00001421735 fastq.gz 1.9 MB Report
EGAF00001421736 fastq.gz 1.9 MB Report
EGAF00001421737 fastq.gz 1.4 MB Report
EGAF00001421738 fastq.gz 1.5 MB Report
EGAF00001421739 fastq.gz 288.2 MB Report
EGAF00001421740 fastq.gz 310.9 MB Report
EGAF00001421741 fastq.gz 1.2 MB Report
EGAF00001421742 fastq.gz 1.2 MB Report
EGAF00001421743 fastq.gz 910.3 kB Report
EGAF00001421744 fastq.gz 947.8 kB Report
EGAF00001421745 fastq.gz 560.9 kB Report
EGAF00001421746 fastq.gz 588.7 kB Report
EGAF00001421747 fastq.gz 2.6 MB Report
EGAF00001421748 fastq.gz 2.6 MB Report
EGAF00001421749 fastq.gz 1.3 MB Report
EGAF00001421750 fastq.gz 1.3 MB Report
EGAF00001421751 fastq.gz 87.8 MB Report
EGAF00001421752 fastq.gz 96.3 MB Report
EGAF00001421753 fastq.gz 486.1 kB Report
EGAF00001421754 fastq.gz 492.6 kB Report
EGAF00001421755 fastq.gz 1.4 MB Report
EGAF00001421756 fastq.gz 1.5 MB Report
EGAF00001421757 fastq.gz 1.5 MB Report
EGAF00001421758 fastq.gz 1.5 MB Report
EGAF00001421759 fastq.gz 23.2 MB Report
EGAF00001421760 fastq.gz 24.5 MB Report
EGAF00001421851 fastq.gz 1.3 MB Report
EGAF00001421852 fastq.gz 1.3 MB Report
EGAF00001421853 fastq.gz 1.6 MB Report
EGAF00001421854 fastq.gz 1.6 MB Report
EGAF00001421855 fastq.gz 593.5 kB Report
EGAF00001421856 fastq.gz 600.9 kB Report
EGAF00001421857 fastq.gz 1.2 MB Report
EGAF00001421858 fastq.gz 1.3 MB Report
EGAF00001421859 fastq.gz 1.1 MB Report
EGAF00001421860 fastq.gz 1.2 MB Report
EGAF00001421861 fastq.gz 726.5 kB Report
EGAF00001421862 fastq.gz 746.7 kB Report
EGAF00001421863 fastq.gz 659.0 kB Report
EGAF00001421864 fastq.gz 679.0 kB Report
EGAF00001421865 fastq.gz 612.3 kB Report
EGAF00001421866 fastq.gz 633.5 kB Report
EGAF00001421867 fastq.gz 2.7 MB Report
EGAF00001421868 fastq.gz 2.8 MB Report
EGAF00001421869 fastq.gz 1.5 MB Report
EGAF00001421870 fastq.gz 1.5 MB Report
EGAF00001421871 fastq.gz 78.1 MB Report
EGAF00001421872 fastq.gz 83.5 MB Report
EGAF00001421873 fastq.gz 4.3 MB Report
EGAF00001421874 fastq.gz 4.6 MB Report
EGAF00001421875 fastq.gz 199.9 MB Report
EGAF00001421876 fastq.gz 217.0 MB Report
EGAF00001421877 fastq.gz 1.5 MB Report
EGAF00001421878 fastq.gz 1.6 MB Report
EGAF00001421879 fastq.gz 650.7 kB Report
EGAF00001421880 fastq.gz 664.2 kB Report
EGAF00001421971 fastq.gz 601.3 kB Report
EGAF00001421972 fastq.gz 616.6 kB Report
EGAF00001421973 fastq.gz 569.5 kB Report
EGAF00001421974 fastq.gz 591.2 kB Report
EGAF00001421975 fastq.gz 149.6 MB Report
EGAF00001421976 fastq.gz 164.6 MB Report
EGAF00001421977 fastq.gz 334.5 MB Report
EGAF00001421978 fastq.gz 369.7 MB Report
EGAF00001421979 fastq.gz 219.6 MB Report
EGAF00001421980 fastq.gz 243.8 MB Report
EGAF00001421981 fastq.gz 532.0 kB Report
EGAF00001421982 fastq.gz 545.9 kB Report
EGAF00001421983 fastq.gz 785.0 kB Report
EGAF00001421984 fastq.gz 829.8 kB Report
EGAF00001421985 fastq.gz 1.2 MB Report
EGAF00001421986 fastq.gz 1.2 MB Report
EGAF00001421987 fastq.gz 132.0 MB Report
EGAF00001421988 fastq.gz 145.0 MB Report
EGAF00001421989 fastq.gz 37.1 MB Report
EGAF00001421990 fastq.gz 41.3 MB Report
EGAF00001421991 fastq.gz 591.7 kB Report
EGAF00001421992 fastq.gz 610.3 kB Report
EGAF00001421993 fastq.gz 518.2 kB Report
EGAF00001421994 fastq.gz 531.7 kB Report
EGAF00001421995 fastq.gz 7.1 MB Report
EGAF00001421996 fastq.gz 7.8 MB Report
EGAF00001421997 fastq.gz 248.0 MB Report
EGAF00001421998 fastq.gz 274.4 MB Report
EGAF00001421999 fastq.gz 24.8 MB Report
EGAF00001422000 fastq.gz 27.0 MB Report
192 Files (16.2 GB)