About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Whole genome sequencing data to study therapeutic targeting of ependymoma

This dataset contains whole genome sequencing data from 24 patients. For each patient a tumour and control sample has been sequenced on a Illumina HiSeq2000 instrument in paired-end mode. Up to three lanes per sample have been sequenced resulting in 112 Fastq files.

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Data Access Agreement - divisions B060 and B062, German Cancer Research Center (DKFZ)

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001002696 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00001842861 fastq.gz 1.8 GB Report
EGAF00001842862 fastq.gz 1.9 GB Report
EGAF00001842863 fastq.gz 1.8 GB Report
EGAF00001842864 fastq.gz 1.9 GB Report
EGAF00001842865 fastq.gz 4.9 GB Report
EGAF00001842866 fastq.gz 5.1 GB Report
EGAF00001842867 fastq.gz 4.4 GB Report
EGAF00001842868 fastq.gz 4.6 GB Report
EGAF00001842869 fastq.gz 3.4 GB Report
EGAF00001842870 fastq.gz 3.6 GB Report
EGAF00001842871 fastq.gz 3.0 GB Report
EGAF00001842872 fastq.gz 3.2 GB Report
EGAF00001842873 fastq.gz 3.2 GB Report
EGAF00001842874 fastq.gz 3.4 GB Report
EGAF00001842875 fastq.gz 3.7 GB Report
EGAF00001842876 fastq.gz 3.9 GB Report
EGAF00001842877 fastq.gz 2.0 GB Report
EGAF00001842878 fastq.gz 2.0 GB Report
EGAF00001842879 fastq.gz 2.5 GB Report
EGAF00001842880 fastq.gz 2.5 GB Report
EGAF00001842881 fastq.gz 1.0 GB Report
EGAF00001842882 fastq.gz 1.1 GB Report
EGAF00001842883 fastq.gz 2.2 GB Report
EGAF00001842884 fastq.gz 2.3 GB Report
EGAF00001842885 fastq.gz 1.4 GB Report
EGAF00001842886 fastq.gz 1.4 GB Report
EGAF00001842887 fastq.gz 1.4 GB Report
EGAF00001842888 fastq.gz 1.4 GB Report
EGAF00001842889 fastq.gz 1.5 GB Report
EGAF00001842890 fastq.gz 1.6 GB Report
EGAF00001842891 fastq.gz 1.5 GB Report
EGAF00001842892 fastq.gz 1.6 GB Report
EGAF00001842893 fastq.gz 1.4 GB Report
EGAF00001842894 fastq.gz 1.4 GB Report
EGAF00001842895 fastq.gz 1.6 GB Report
EGAF00001842896 fastq.gz 1.6 GB Report
EGAF00001842897 fastq.gz 2.3 GB Report
EGAF00001842898 fastq.gz 2.4 GB Report
EGAF00001842899 fastq.gz 4.2 GB Report
EGAF00001842900 fastq.gz 4.5 GB Report
EGAF00001842901 fastq.gz 3.2 GB Report
EGAF00001842902 fastq.gz 3.3 GB Report
EGAF00001842903 fastq.gz 3.7 GB Report
EGAF00001842904 fastq.gz 3.9 GB Report
EGAF00001842905 fastq.gz 1.6 GB Report
EGAF00001842906 fastq.gz 1.6 GB Report
EGAF00001842907 fastq.gz 2.5 GB Report
EGAF00001842908 fastq.gz 2.6 GB Report
EGAF00001842909 fastq.gz 4.6 GB Report
EGAF00001842910 fastq.gz 4.9 GB Report
EGAF00001842911 fastq.gz 4.4 GB Report
EGAF00001842912 fastq.gz 4.6 GB Report
EGAF00001842913 fastq.gz 1.5 GB Report
EGAF00001842914 fastq.gz 1.6 GB Report
EGAF00001842915 fastq.gz 1.8 GB Report
EGAF00001842916 fastq.gz 1.8 GB Report
EGAF00001842917 fastq.gz 2.2 GB Report
EGAF00001842918 fastq.gz 2.2 GB Report
EGAF00001842919 fastq.gz 1.5 GB Report
EGAF00001842920 fastq.gz 1.5 GB Report
EGAF00001842921 fastq.gz 896.0 MB Report
EGAF00001842922 fastq.gz 909.2 MB Report
EGAF00001842923 fastq.gz 1.9 GB Report
EGAF00001842924 fastq.gz 1.9 GB Report
EGAF00001842925 fastq.gz 1.8 GB Report
EGAF00001842926 fastq.gz 1.8 GB Report
EGAF00001842927 fastq.gz 1.6 GB Report
EGAF00001842928 fastq.gz 1.6 GB Report
EGAF00001842929 fastq.gz 2.3 GB Report
EGAF00001842930 fastq.gz 2.3 GB Report
EGAF00001842931 fastq.gz 2.3 GB Report
EGAF00001842932 fastq.gz 2.3 GB Report
EGAF00001842933 fastq.gz 1.5 GB Report
EGAF00001842934 fastq.gz 1.5 GB Report
EGAF00001842935 fastq.gz 1.5 GB Report
EGAF00001842936 fastq.gz 1.5 GB Report
EGAF00001842937 fastq.gz 1.6 GB Report
EGAF00001842938 fastq.gz 1.7 GB Report
EGAF00001842939 fastq.gz 1.6 GB Report
EGAF00001842940 fastq.gz 1.7 GB Report
EGAF00001842941 fastq.gz 2.3 GB Report
EGAF00001842942 fastq.gz 2.3 GB Report
EGAF00001842943 fastq.gz 2.0 GB Report
EGAF00001842944 fastq.gz 2.1 GB Report
EGAF00001842945 fastq.gz 4.1 GB Report
EGAF00001842946 fastq.gz 4.3 GB Report
EGAF00001842947 fastq.gz 3.6 GB Report
EGAF00001842948 fastq.gz 3.8 GB Report
EGAF00001842949 fastq.gz 1.4 GB Report
EGAF00001842950 fastq.gz 1.5 GB Report
EGAF00001842951 fastq.gz 1.4 GB Report
EGAF00001842952 fastq.gz 1.5 GB Report
EGAF00001842953 fastq.gz 1.4 GB Report
EGAF00001842954 fastq.gz 1.5 GB Report
EGAF00001842955 fastq.gz 1.4 GB Report
EGAF00001842956 fastq.gz 1.5 GB Report
EGAF00001842957 fastq.gz 4.0 GB Report
EGAF00001842958 fastq.gz 4.2 GB Report
EGAF00001842959 fastq.gz 4.7 GB Report
EGAF00001842960 fastq.gz 4.9 GB Report
EGAF00001842961 fastq.gz 1.6 GB Report
EGAF00001842962 fastq.gz 1.7 GB Report
EGAF00001842963 fastq.gz 1.6 GB Report
EGAF00001842964 fastq.gz 1.7 GB Report
EGAF00001842965 fastq.gz 1.8 GB Report
EGAF00001842966 fastq.gz 1.9 GB Report
EGAF00001842967 fastq.gz 1.8 GB Report
EGAF00001842968 fastq.gz 1.9 GB Report
EGAF00001842969 fastq.gz 3.3 GB Report
EGAF00001842970 fastq.gz 3.5 GB Report
EGAF00001842971 fastq.gz 3.6 GB Report
EGAF00001842972 fastq.gz 3.8 GB Report
112 Files (271.6 GB)