Dataset

DNA methylation (RRBS) data for the validation the glioblastoma progression study (GBMatch).

Dataset ID Technology Samples
EGAD00001004074 Illumina HiSeq 3000 150

Dataset Description

Genome-wide profiling of DNA methylation levels by RRBS in 150 glioblastoma tumor samples. Patients were selected to represent the general population of glioblastoma patients based on Austrian Brain Tumor Registry. These DNA methylation profiles were created for the validation of the glioblastoma progression study (GBMatch) and consist of 106 profiles from FFPE samples and 44 profiles from fresh-frozen samples. For the 44 fresh-frozen samples also WGS data (43 genomes) and RNA-seq data (37 transcriptomes) have been produced for validation purposes.

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

DAC to control the access to the RRBS raw data of the glioblastom progression study (GBMatch).
Contact person: Johannes Hainfellner
Email: johannes [dot] hainfellner [at] meduniwien [dot] ac [dot] at
More details: EGAC00001000689

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