DNA methylation (RRBS) data for the validation the glioblastoma progression study (GBMatch).
Genome-wide profiling of DNA methylation levels by RRBS in 150 glioblastoma tumor samples. Patients were selected to represent the general population of glioblastoma patients based on Austrian Brain Tumor Registry. These DNA methylation profiles were created for the validation of the glioblastoma progression study (GBMatch) and consist of 106 profiles from FFPE samples and 44 profiles from fresh-frozen samples. For the 44 fresh-frozen samples also WGS data (43 genomes) and RNA-seq data (37 transcriptomes) have been produced for validation purposes.
- 12/04/2018
- 150 samples
- DAC: EGAC00001000689
- Technology: Illumina HiSeq 3000
Data Access Agreement for access to the DNA methylation sequence data that have been generated in the glioblastoma progression (GBMatch) study.
Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.
| Study ID | Study Title | Study Type |
|---|---|---|
| EGAS00001002538 | Other |
This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.
| ID | File Type | Size | Quality Report |
Located in
i
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|---|---|---|---|---|
| EGAF00001992706 | bam | 1.1 GB | Report |
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| EGAF00001992707 | bam | 1.1 GB | Report |
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| EGAF00001992708 | bam | 1.1 GB | Report |
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| EGAF00001992709 | bam | 940.5 MB | Report |
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| EGAF00001992710 | bam | 807.9 MB | Report |
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| EGAF00001992711 | bam | 856.5 MB | Report |
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| EGAF00001992712 | bam | 963.6 MB | Report |
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| EGAF00001992713 | bam | 1.3 GB | Report |
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| EGAF00001992714 | bam | 998.8 MB | Report |
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| EGAF00001992715 | bam | 987.3 MB | Report |
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| EGAF00001992716 | bam | 1.0 GB | Report |
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| EGAF00001992717 | bam | 811.5 MB | Report |
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| EGAF00001992718 | bam | 962.7 MB | Report |
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| EGAF00001992719 | bam | 821.0 MB | Report |
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| EGAF00001992720 | bam | 1.5 GB | Report |
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| EGAF00001992721 | bam | 811.9 MB | Report |
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| EGAF00001992722 | bam | 865.4 MB | Report |
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| EGAF00001992723 | bam | 957.5 MB | Report |
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| EGAF00001992724 | bam | 1.0 GB | Report |
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| EGAF00001992725 | bam | 1.8 GB | Report |
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| EGAF00001992726 | bam | 1.1 GB | Report |
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| EGAF00001992727 | bam | 955.2 MB | Report |
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| EGAF00001992728 | bam | 626.1 MB | Report |
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| EGAF00001992729 | bam | 1.0 GB | Report |
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| EGAF00001992730 | bam | 1.0 GB | Report |
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| EGAF00001992731 | bam | 1.2 GB | Report |
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| EGAF00001992732 | bam | 1.0 GB | Report |
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| EGAF00001992733 | bam | 1.3 GB | Report |
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| EGAF00001992734 | bam | 1.4 GB | Report |
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| EGAF00001992735 | bam | 1.3 GB | Report |
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| EGAF00001992736 | bam | 1.0 GB | Report |
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| EGAF00001992737 | bam | 1.1 GB | Report |
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| EGAF00001992738 | bam | 1.4 GB | Report |
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| EGAF00001992739 | bam | 1.8 GB | Report |
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| EGAF00001992740 | bam | 1.2 GB | Report |
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| EGAF00001992741 | bam | 1.2 GB | Report |
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| EGAF00001992742 | bam | 988.7 MB | Report |
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| EGAF00001992743 | bam | 1.5 GB | Report |
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| EGAF00001992744 | bam | 916.9 MB | Report |
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| EGAF00001992745 | bam | 1.4 GB | Report |
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| EGAF00001992746 | bam | 972.8 MB | Report |
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| EGAF00001992747 | bam | 1.5 GB | Report |
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| EGAF00001992748 | bam | 1.3 GB | Report |
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| EGAF00001992749 | bam | 1.9 GB | Report |
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| EGAF00001992750 | bam | 943.9 MB | Report |
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| EGAF00001992751 | bam | 1.9 GB | Report |
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| EGAF00001992752 | bam | 894.4 MB | Report |
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| EGAF00001992753 | bam | 1.5 GB | Report |
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| EGAF00001992754 | bam | 718.9 MB | Report |
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| EGAF00001992755 | bam | 1.1 GB | Report |
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| EGAF00001992756 | bam | 1.2 GB | Report |
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| EGAF00001992757 | bam | 835.9 MB | Report |
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| EGAF00001992758 | bam | 1.1 GB | Report |
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| EGAF00001992759 | bam | 1.1 GB | Report |
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| EGAF00001992760 | bam | 1.4 GB | Report |
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| EGAF00001992761 | bam | 1.7 GB | Report |
|
| EGAF00001992762 | bam | 778.1 MB | Report |
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| EGAF00001992763 | bam | 1.3 GB | Report |
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| EGAF00001992764 | bam | 970.8 MB | Report |
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| EGAF00001992765 | bam | 1.1 GB | Report |
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| EGAF00001992766 | bam | 1.1 GB | Report |
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| EGAF00001992767 | bam | 1.0 GB | Report |
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| EGAF00001992768 | bam | 1.0 GB | Report |
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| EGAF00001992769 | bam | 1.1 GB | Report |
|
| EGAF00001992770 | bam | 880.2 MB | Report |
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| EGAF00001992771 | bam | 944.1 MB | Report |
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| EGAF00001992772 | bam | 917.9 MB | Report |
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| EGAF00001992773 | bam | 997.6 MB | Report |
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| EGAF00001992774 | bam | 1.5 GB | Report |
|
| EGAF00001992775 | bam | 1.4 GB | Report |
|
| EGAF00001992776 | bam | 567.2 MB | Report |
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| EGAF00001992777 | bam | 1.2 GB | Report |
|
| EGAF00001992778 | bam | 827.6 MB | Report |
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| EGAF00001992779 | bam | 1.2 GB | Report |
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| EGAF00001992780 | bam | 1.1 GB | Report |
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| EGAF00001992781 | bam | 1.1 GB | Report |
|
| EGAF00001992782 | bam | 1.0 GB | Report |
|
| EGAF00001992783 | bam | 887.2 MB | Report |
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| EGAF00001992784 | bam | 1.7 GB | Report |
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| EGAF00001992785 | bam | 1.2 GB | Report |
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| EGAF00001992786 | bam | 983.5 MB | Report |
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| EGAF00001992787 | bam | 1.3 GB | Report |
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| EGAF00001992788 | bam | 1.1 GB | Report |
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| EGAF00001992789 | bam | 1.4 GB | Report |
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| EGAF00001992790 | bam | 785.7 MB | Report |
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| EGAF00001992791 | bam | 1.3 GB | Report |
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| EGAF00001992792 | bam | 1.6 GB | Report |
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| EGAF00001992793 | bam | 2.0 GB | Report |
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| EGAF00001992794 | bam | 727.0 MB | Report |
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| EGAF00001992795 | bam | 1.4 GB | Report |
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| EGAF00001992796 | bam | 1.1 GB | Report |
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| EGAF00001992797 | bam | 1.2 GB | Report |
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| EGAF00001992798 | bam | 571.9 MB | Report |
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| EGAF00001992799 | bam | 921.1 MB | Report |
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| EGAF00001992800 | bam | 1.0 GB | Report |
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| EGAF00001992801 | bam | 1.1 GB | Report |
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| EGAF00001992802 | bam | 1.1 GB | Report |
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| EGAF00001992803 | bam | 1.0 GB | Report |
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| EGAF00001992804 | bam | 927.6 MB | Report |
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| EGAF00001992805 | bam | 723.8 MB | Report |
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| EGAF00001992806 | bam | 865.6 MB | Report |
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| EGAF00001992807 | bam | 1.2 GB | Report |
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| EGAF00001992808 | bam | 1.9 GB | Report |
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| EGAF00001992809 | bam | 2.2 GB | Report |
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| EGAF00001992810 | bam | 1.5 GB | Report |
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| EGAF00001992811 | bam | 1.2 GB | Report |
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| EGAF00001992812 | bam | 1.9 GB | Report |
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| EGAF00001992813 | bam | 1.1 GB | Report |
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| EGAF00001992814 | bam | 925.5 MB | Report |
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| EGAF00001992815 | bam | 947.8 MB | Report |
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| EGAF00001992816 | bam | 1.3 GB | Report |
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| EGAF00001992817 | bam | 1.5 GB | Report |
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| EGAF00001992818 | bam | 1.5 GB | Report |
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| EGAF00001992819 | bam | 2.4 GB | Report |
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| EGAF00001992820 | bam | 1.6 GB | Report |
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| EGAF00001992821 | bam | 948.8 MB | Report |
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| EGAF00001992822 | bam | 1.5 GB | Report |
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| EGAF00001992823 | bam | 1.4 GB | Report |
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| EGAF00001992824 | bam | 960.5 MB | Report |
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| EGAF00001992825 | bam | 1.2 GB | Report |
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| EGAF00001992826 | bam | 902.7 MB | Report |
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| EGAF00001992827 | bam | 857.9 MB | Report |
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| EGAF00001992828 | bam | 1.4 GB | Report |
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| EGAF00001992829 | bam | 2.1 GB | Report |
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| EGAF00001992830 | bam | 1.6 GB | Report |
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| EGAF00001992831 | bam | 1.8 GB | Report |
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| EGAF00001992832 | bam | 1.5 GB | Report |
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| EGAF00001992833 | bam | 943.4 MB | Report |
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| EGAF00001992834 | bam | 1.5 GB | Report |
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| EGAF00001992835 | bam | 1.5 GB | Report |
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| EGAF00001992836 | bam | 3.8 MB | Report |
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| EGAF00001992837 | bam | 1.8 GB | Report |
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| EGAF00001992838 | bam | 1.4 GB | Report |
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| EGAF00001992839 | bam | 1.4 GB | Report |
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| EGAF00001992840 | bam | 2.3 GB | Report |
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| EGAF00001992841 | bam | 1.2 GB | Report |
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| EGAF00001992842 | bam | 1.8 GB | Report |
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| EGAF00001992843 | bam | 899.6 MB | Report |
|
| EGAF00001992844 | bam | 926.6 MB | Report |
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| EGAF00001992845 | bam | 867.5 MB | Report |
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| EGAF00001992846 | bam | 1.3 GB | Report |
|
| EGAF00001992847 | bam | 887.9 MB | Report |
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| EGAF00001992848 | bam | 1.1 GB | Report |
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| EGAF00001992849 | bam | 1.2 GB | Report |
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| EGAF00001992850 | bam | 905.5 MB | Report |
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| EGAF00001992851 | bam | 757.2 MB | Report |
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| EGAF00001992852 | bam | 1.2 GB | Report |
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| EGAF00001992853 | bam | 1.4 GB | Report |
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| EGAF00001992854 | bam | 1.6 GB | Report |
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| EGAF00001992855 | bam | 1.2 GB | Report |
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| 150 Files (178.6 GB) | ||||