RNA Sequencing of Colorectal Liver Metastases

Dataset ID Technology Samples
EGAD00001004111 Illumina HiSeq 2500 93

Dataset Description

Reverse-stranded paired-end 75 base-pair RNA sequencing libraries of 93 metastatic FFPE samples were constructed using Illumina Total RNA Stranded Kits. Ribosomal RNAs (rRNAs) were depleted by using the Ribo-Zero rRNA Removal Kit (Illumina). Libraries were sequenced on a HiSEQ2500 machine. Five samples were re-sequenced using paired-end 50 base-pair libraries due to the smaller insert sizes.

Who controls access to this dataset

For each dataset that requires controlled access, there is a corresponding Data Access Committee (DAC) who determine access permissions. Access to actual data files is not managed by the EGA. If you need to request access to this data set, please contact:

RNA Sequencing of Surgically Resected Colorectal Liver Metastases
Contact person: Sean Pitroda
Email: spitroda1 [at] bsd [dot] uchicago [dot] edu
More details: EGAC00001000904


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