About file location

As the EGA is co-managed by the EMBL-EBI and CRG, files could be located in the UK and/or Spain, as indicated by their respective flags.

Alternatively, files could be located in one of the international Federated EGA nodes, as indicated next to the node's flag.
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Low pass whole genome sequencing of CACRC

Genome-wide copy number profiling was performed using low-pass whole genome sequencing on archival non-dysplastic mucosa (n=9), low-grade dysplasia (LGD; n=30), high-grade dysplasia (HGD; n=13), mixed LGD/HGD (n=7) and CA-CRC (n=19).

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Studies are experimental investigations of a particular phenomenon, e.g., case-control studies on a particular trait or cancer research projects reporting matching cancer normal genomes from patients.

Study ID Study Title Study Type
EGAS00001003028 Other

This table displays only public information pertaining to the files in the dataset. If you wish to access this dataset, please submit a request. If you already have access to these data files, please consult the download documentation.

ID File Type Size Quality Report
Located in
i
EGAF00002056052 bam 150.4 MB Report
EGAF00002056053 bam 248.5 MB Report
EGAF00002056054 bam 301.3 MB Report
EGAF00002056055 bam 137.3 MB Report
EGAF00002056056 bam 637.4 MB Report
EGAF00002056057 bam 375.1 MB Report
EGAF00002056058 bam 372.1 MB Report
EGAF00002056059 bam 462.5 MB Report
EGAF00002056060 bam 325.9 MB Report
EGAF00002056061 bam 494.5 MB Report
EGAF00002056062 bam 363.7 MB Report
EGAF00002056063 bam 307.1 MB Report
EGAF00002056064 bam 465.8 MB Report
EGAF00002056065 bam 232.9 MB Report
EGAF00002056066 bam 266.6 MB Report
EGAF00002056067 bam 318.1 MB Report
EGAF00002056068 bam 536.9 MB Report
EGAF00002056069 bam 410.5 MB Report
EGAF00002056070 bam 469.0 MB Report
EGAF00002056071 bam 169.6 MB Report
EGAF00002056072 bam 157.5 MB Report
EGAF00002056073 bam 454.9 MB Report
EGAF00002056074 bam 129.9 MB Report
EGAF00002056075 bam 168.2 MB Report
EGAF00002056076 bam 264.6 MB Report
EGAF00002056077 bam 390.1 MB Report
EGAF00002056078 bam 365.6 MB Report
EGAF00002056079 bam 549.4 MB Report
EGAF00002056080 bam 186.4 MB Report
EGAF00002056081 bam 193.1 MB Report
EGAF00002056082 bam 610.8 MB Report
EGAF00002056083 bam 225.0 MB Report
EGAF00002056084 bam 430.9 MB Report
EGAF00002056085 bam 451.2 MB Report
EGAF00002056086 bam 393.9 MB Report
EGAF00002056087 bam 269.0 MB Report
EGAF00002056088 bam 410.5 MB Report
EGAF00002056089 bam 403.8 MB Report
EGAF00002056090 bam 487.3 MB Report
EGAF00002056091 bam 423.3 MB Report
EGAF00002056092 bam 354.2 MB Report
EGAF00002056093 bam 353.6 MB Report
EGAF00002056094 bam 301.4 MB Report
EGAF00002056095 bam 174.5 MB Report
EGAF00002056096 bam 465.4 MB Report
EGAF00002056097 bam 294.5 MB Report
EGAF00002056098 bam 279.5 MB Report
EGAF00002056099 bam 315.9 MB Report
EGAF00002056100 bam 379.1 MB Report
EGAF00002056101 bam 660.6 MB Report
EGAF00002056102 bam 366.2 MB Report
EGAF00002056103 bam 240.8 MB Report
EGAF00002056104 bam 234.6 MB Report
EGAF00002056105 bam 181.7 MB Report
EGAF00002056106 bam 205.5 MB Report
EGAF00002056107 bam 391.8 MB Report
EGAF00002056108 bam 210.0 MB Report
EGAF00002056109 bam 274.1 MB Report
EGAF00002056110 bam 433.0 MB Report
EGAF00002056111 bam 201.0 MB Report
EGAF00002056112 bam 475.4 MB Report
EGAF00002056113 bam 426.9 MB Report
EGAF00002056114 bam 421.5 MB Report
EGAF00002056115 bam 346.4 MB Report
EGAF00002056116 bam 320.1 MB Report
EGAF00002056117 bam 445.8 MB Report
EGAF00002056118 bam 326.1 MB Report
EGAF00002056119 bam 159.7 MB Report
EGAF00002056120 bam 329.2 MB Report
EGAF00002056121 bam 176.1 MB Report
EGAF00002056122 bam 408.1 MB Report
EGAF00002056123 bam 452.0 MB Report
EGAF00002056124 bam 324.8 MB Report
EGAF00002056424 bam 476.9 MB Report
EGAF00002056426 bam 385.5 MB Report
EGAF00002056432 bam 541.6 MB Report
EGAF00002056438 bam 528.1 MB Report
EGAF00002056448 bam 646.3 MB Report
EGAF00002056450 bam 312.6 MB Report
EGAF00002056465 bam 379.5 MB Report
EGAF00002056466 bam 602.2 MB Report
81 Files (28.8 GB)